Molecular diversity of Egyptian cotton (<Emphasis Type="Italic">Gossypium barbadense</Emphasis> L.) and its relation to varietal development

Twenty-eight Egyptian cotton (Gossypium barbadense L.) genotypes (varieties and hybrids) were used for analysis of genetic diversity using DNA based markers (ISSR, SSR, and EST) and to study varietal development of cotton. The ISSR markers gave the highest percentage of polymorphic bands as well as polymorphic information content compared with the other molecular markers (i.e. EST and SSR markers). Using clustering analysis, no general clustering according to the pedigree history of the genotypes was observed. Using principal coordinate analysis (PCOORDA), cotton genotypes were separated by the first three principal coordinates (PC1, PC2, and PC3) accounting for 11.5, 8.6, and 7.2% of the total genetic variance, respectively. The cotton genotypes were distributed into three parts based on the first PC, each part containing a group of varieties having a common ancestor. ‘Giza 12’ variety was the common ancestor for the varieties included in the first part and ‘Ashmouni’ variety was the common ancestor for the varieties included in the second part, while both ‘Sakha 3’ and ‘Sakha 4’ varieties were common ancestors for the varieties included in the third part. The results of the PCOORDA also showed better resolution of the genetic diversity than cluster analysis especially in the illustration of the varietal development of cotton. That means that principal coordinate analysis can be strongly used either alone or in combination with cluster analysis to discuss both genetic diversity and varietal development in the cotton genotypes.     

Phenotypic segregation and relationships of agronomic traits in Monastrell × Syrah wine grape progeny

The aim of this work was to study the phenotypic segregation of different agronomic and fruit quality traits, and their relationships, in Monastrell × Syrah wine grape progeny. Twenty-two agronomic traits were evaluated and compared for three consecutive years in this progeny. The results show the phenotypic diversity existing in a cross between two different wine grape cultivars. Most of the phenological, productive, morphological, and enological parameters evaluated displayed continuous variation within the progeny, suggesting a polygenic inheritance. Some correlations between traits were detected by the Spearman correlation test, although high coefficients were not found for most of them. Cluster analysis of the progeny grouped the hybrids based on criteria with significance for wine grape breeding. Also, we investigated the relationship between the skin color and total content of anthocyanins with the VvmybA genotype, using the CAPS (Cleaved Amplified Polymorphic Sequence) marker 20D18CB9. The results show that hybrids with two copies of the functional color allele tend to have increased anthocyanins content. Based on this study, 14 genotypes were pre-selected from the breeding population for additional quality studies.     

Genetic and cytological analysis of a new spontaneous male sterility in radish (<Emphasis Type="Italic">Raphanus sativus</Emphasis> L.)

A male sterile plant appeared in the radish breeding program at the Hubei Academy of Agricultural Sciences, Hubei, China. In its progeny, a two-type (half of plants male sterile, the other half male fertile) line 01GAB was established. An F₂ population of 260 plants from a cross of male-sterile 01GAB and a male fertile line 9802H segregated for male fertility in a 3:1 ratio indicating that fertility was restored by a single dominant gene, here designated RsMs. A PCR-based DNA marker specific to the male fertility Rfob gene in 9802H was absent in 01GAB. Linkage analysis placed the RsMs locus 10.7 cM away from the Rfo locus. In an F₂ population of hybrids between 01GAB and male fertile 9802B, a co-dominant DNA marker for the RSultr3.2A (a radish sulfate transporter gene) locus was linked to the RsMs locus at 1.5 cM suggesting that fertility restoration in 01GAB was located in the region with known male sterility restorers in radish. However, no maintainer for the 01GAB source of male sterility has been identified so far. Cytological observations have shown that the abnormalities in male sterile anthers first appeared in tapetum at the tetrad stage, followed by a hypertrophy of the tapetal cells at the vacuolate microspore period. These results suggest that male sterility in 01GAB is likely to be genetic in nature, or it may represent a new type of the cytoplasmic male sterility.     

Using midday stem water potential for scheduling deficit irrigation in mid–late maturing peach trees under Mediterranean conditions

Irrigation techniques that reduce water applications are increasingly applied in areas with scarce water resources. In this study, the effect of two regulated deficit irrigation (RDI) strategies on peach [Prunus persica (L.) Batsch cv. “Catherine”] performance was studied over three growing seasons. The experimental site was located in Murcia (SE Spain), a Mediterranean region. Two RDI strategies (restricting water applications at stage II of fruit development and postharvest) based on stem water potential (Ψ_s) thresholds (?1.5 and ?1.8 MPa during fruit growth and ?1.5 and ?2.0 MPa during postharvest) were compared to a fully irrigated control. Soil water content (θ_v), Ψ_s, gas exchange parameters, vegetative growth, crop load, yield and fruit quality were determined. RDI treatments showed significantly lower values of θ_v and Ψ_s than control trees when irrigation water was restricted, causing reductions in stomatal conductance and photosynthesis rates. Vegetative growth was reduced by RDI, as lower shoot lengths and pruning weights were observed under those treatments when compared to control. However, fruit size and yield were unaffected, and fruit quality was slightly improved by RDI. Water savings from 43 to 65 % were achieved depending on the year and the RDI strategy, and no negative carryover effect was detected during the study period. In conclusion, RDI strategies using Ψ_s thresholds for scheduling irrigation in mid–late maturing peach trees under Mediterranean conditions are viable options to save water without compromising yield and even improving fruit quality.     

Understanding physical clogging in drip irrigation: in situ,in-lab and numerical approaches

Dripper clogging is a major drawback of microirrigation systems that must be addressed to improve their efficiency and durability. Particle-induced clogging is first studied in situ. The experiments consist in observing in real conditions the behavior of a series of drippers fitted on an agricultural plot in the south of France. The plot is supplied from a canal with Durance River water. The latter is loaded with sediments that gradually clog drippers and filters. Water analysis reveal that physicochemical clogging prevails over biological clogging. This characterization helps in setting in-lab experiment protocol. Indeed, besides field observation of clogging, laboratory analyses of both the irrigation water and the clogging material are performed with reactive and inert clay: smectite and an illite–calcite mix. A surprising tendency is observed: Salt concentration in smectite seeded water decreases the clogging, whereas it increases agglomerate size. Computational fluid dynamic simulations are carried out to investigate the impact of particles on flow behavior. Results demonstrate that clay particles interacting with the flow govern the complex structure of the fluid velocity fields inside the dripper labyrinth channel.     

“WaterMan”: an on-farm water management game with heuristic capabilities

A modern computer-based simulation tool (WaterMan) in the form of a game for on-farm water management was developed for application in training events for farmers, students, and irrigators. The WaterMan game utilizes an interactive framework, thereby allowing the user to develop scenarios and test alternatives in a convenient, risk-free environment. It includes a comprehensive soil water and salt balance calculation algorithm. It also employs heuristic capabilities for modeling all of the important aspects of on-farm water management, and to provide quantitative performance evaluations and practical water management advice to the trainees. Random events (both favorable and unfavorable) and different strategic decisions are included in the game for more realism and to provide an appropriate level of challenge according to player performance. Thus, the ability to anticipate the player skill level, and to reply with random events appropriate to the anticipated level, is provided by the heuristic capabilities used in the software. These heuristic features were developed based on a combination of two artificial intelligence approaches: (1) a pattern recognition approach and (2) reinforcement learning based on a Markov decision processes approach, specifically the Q-learning method. These two approaches were combined in a new way to account for the difference in the effect of actions taken by the player and action taken by the system in the game world. The reward function for the Q-learning method was modified to reflect the suggested classification of the WaterMan game as what is referred to as a partially competitive and partially cooperative game.     

Yield response and <Emphasis Type="Italic">Stenocarpella</Emphasis> ear rot reaction among selected maize inbred lines and top cross hybrids

Stenocarpella ear rot of maize caused by Stenocarpella maydis (Berk.) Sutton is one of the most important ear rot diseases in South Africa. The objective of this study was to identify suitable maize inbred lines and top cross hybrids with Stenocarpella ear rot resistance and high grain yield. The study was conducted using 54 inbred lines and 54 top crosses with selected standard checks under natural and artificial disease inoculations. A split-plot design was used with three replications. There were considerable variations among tested inbred lines and top crosses for Stenocarpella ear rot resistance and grain yield. Two promising inbred lines GCI-35 and GCI-50 were selected possessing resistance to Stenocarpella ear rot and increased grain yield. Inbred line GCI-35 had a grain yield of 6.31 and 6.27 t/ha under natural and artificial inoculations, respectively. Line GCI-50 yielded 5.8 and 5.7 t/ha when tested under natural and artificial disease infestations, respectively. Two top cross hybrids GCT-14 and GCT-30 were selected with greater grain yield and high level of Stenocarpella ear rot resistance. Top cross entry GCT-14 yielded 7.5 and 9.33 t/ha, respectively, whereas GCT-30 had yield of 7.65 and 9.21 t/ha, respectively. The selected inbred lines and top cross hybrids will be useful in maize improvement for Stenocarpella ear rot resistance and increased grain yield in South Africa or other similar environments.     

Identifying high yielding stable winter wheat genotypes for irrigated environments in Central and West Asia

Improved winter wheat (Triticum aestivum L.) cultivars are needed for the diverse environments in Central and West Asia to improve rural livelihoods. This study was conducted to determine the performance of elite winter wheat breeding lines developed by the International Winter Wheat Improvement Program (IWWIP), to analyze their stability across diverse environments, and to identify superior genotypes that could be valuable for winter wheat improvement or varietal release. One hundred and one advanced winter wheat breeding lines and four check cultivars were tested over a 5-year period (2004–2008). Grain yield and agronomic traits were analyzed. Stability and genotypic superiority for grain yield were determined using genotype and genotype × environment (GGE) biplot analysis. The experimental genotypes showed high levels of grain yield in each year, with mean values ranging from 3.9 to 6.7 t ha⁻¹. A set of 25 experimental genotypes was identified. These were either equal or superior to the best check based on their high mean yield and stability across environments as assessed by the GGE biplot analysis. The more stable high yielding genotypes were ID800994.W/Falke, Agri/Nac//Attila, ID800994W/Vee//F900K/3/Pony/Opata, AU//YT542/N10B/3/II8260/4/JI/Hys/5/Yunnat Esskiy/6/KS82W409/Spn and F130-L-1-12/MV12. The superior genotypes also had acceptable maturity, plant height and 1,000-kernel weight. Among the superior lines, Agri/Nac//Attila and Shark/F4105W2.1 have already been proposed for release in Kyrgyzstan and Georgia, respectively. The findings provide information on wide adaptation of the internationally important winter wheat genotypes, and demonstrate that the IWWIP program is enriching the germplasm base in the region with superior winter wheat genotypes to the benefit of national and international winter wheat improvement programs.     

Mapping genes for deep-seeding tolerance in barley

Deep-seeding tolerance, the emergence of seedlings from deep seeded conditions, is involved in stand establishment in semi-arid regions, where the soil surface is too dry for seed germination. Genes determining deep-seeding tolerance in barley were mapped using two doubled haploid populations derived from the following crosses: Harrington × TR306 (H/T)and Step toe × Morex (S/M). Significant quantitative trait loci (QTLs) for deep-seeding tolerance were found in each population. Two QTL sex plained 40% of the phenotypic variation in the H/T population and one QTL (S/M) 8% of the total phenotypic variance. Multiple QTLs accounting for coleoptile length and first internode length were detected in both populations. In the H/T population, there were coincident QTLs for deep-seeding tolerance, coleoptile length and first internode length on the long arm of chromosome 5H. These QTLs correspond with previously reported QTLs for abscisic acid and gibberellic acid response. QTL coincidence may be due to the pleiotropic effects of alleles at a single locus. This information may be useful for breeding programs manipulating morphological and physiological traits in order to develop varieties for semi-arid regions. This revised version was published online in August 2006 with corrections to the Cover Date.     

Crop response of drought-tolerant and conventional maize hybrids in a semiarid environment

In the High Plains, corn (Zea mays L.) is an important commodity for livestock feed. However, limited water resources and drought conditions continue to hinder corn production. Drought-tolerant (DT) corn hybrids could help maintain high yields under water-limited conditions, though consistent response of such hybrids is unverified. In this two-year study, the effects of three irrigation treatments were investigated for a DT and conventional maize hybrid, Pioneer AQUAMax P0876HR and Pioneer 33Y75, respectively. In 2013, the drier of the 2 years, irrigation amounts and crop water use (ET_c) were greater for the conventional hybrid, but grain water use efficiency (WUE) and harvest index were significantly greater for the DT hybrid. In 2014, grain yields and WUE were not significantly different between hybrids. However, irrigation amounts, ET_c and biomass yields were greater for the conventional hybrid. Results from both years indicate that the DT hybrid required less water to maximize grain yield as compared to the conventional hybrid. Producing relatively high yields with reduced amounts of water may provide a means for producers to continue corn production in a semiarid environment with declining water supplies.