Climate change and agriculture: Impacts and adaptive responses in Iran

The impacts of climate change on agriculture are still shadowed with uncertainty. However, climate change is expected to adversely affect Iran's agricultural practices through changes in precipitation, temperature and carbon dioxide fertilization. Therefore, adaptation of this sector to the increasing weather events is imperative. This study is aimed to document the likely impacts of climate change on Iran's agriculture and the current adaptation efforts made by government and farmers. The review of literature shows that changes in rainfall and water endowments will have significant impacts on crop yield, crops' water requirements and income and welfare of farm families. The extent of the changes in yield depends on the crop type, assumptions related to the CO₂ fertilization effect, climate scenarios and adaptation abilities. On adaptation, the government's efforts have been distinguished in the improving agricultural productivity and irrigation development based on current technology, developing new technologies and policy reforms. Farmers' adaptive responses have also been identified. Some conclusions and recommendations are offered to increase the adaptive capacity of farmers and reduce negative impacts of climate change.     

Reaction wood drying kinetics: tension wood in <Emphasis Type="Italic">Fagus sylvatica</Emphasis> and compression wood in <Emphasis Type="Italic">Picea abies</Emphasis>

The drying kinetics of reaction woods in Picea abies (compression wood) and Fagus sylvatica (tension wood) in comparison with their corresponding normal woods was investigated under constant convective drying conditions. Moisture profiles along the thickness of small flat-sawn boards taken from reaction and opposite wood zones were evaluated using a polychromatic X-ray system, a non-destructive method. The results revealed substantial differences in the drying behavior between the reaction and opposite woods. Both reaction woods represented slower drying rate than their matching normal woods mainly during the period of free water loss. However, the reaction and opposite woods reached the final moisture content (MC) of about 12% at the same time due to higher initial MC in the opposite woods. In the case of reaction wood, it took a longer time for the moisture profile to become approximately uniform. Overall, a more striking difference was observed in the drying behavior of compression and opposite wood in P. abies. Some important anatomical differences like the cell and pit dimensions and their proportion give some explanations for these drying behaviors.     

Green Synthesized Zinc-Glycine Chelate Enhances Antioxidant Protection of Pistachio under Different Soil Boron Levels

Zinc (Zn) and boron (B) disorders are common nutritional stresses in arid and semi-arid regions. In the current study, effectiveness of soil Zn amendment (0, 5.0, 10.0, and 20.0 mg kg^–1 soil) using Zn-glycine chelate (Zn-Gly), a novel Zn-fertilizer, which is especially synthesized for application in calcareous soils in arid and semi-arid areas, was evaluated under different soil B levels (0, 2.5, 5.0, 10.0, and 20.0 mg kg^–1 soil) for a 100-day period. Pistachio, the most valuable crop grown under arid conditions, was used as the model plant. Measurement of electrolyte leakage, H₂O₂, and malondialdehyde indicated the incidence of oxidative stress in the leaves of pistachio under low and high soil B concentrations. In addition, B stress caused a significant increase in lipoxygenase activity in the leaves. Plants treated with 5.0 mg B kg^–1 soil showed the lowest oxidative stress injuries and lipid peroxidation. Application of 5.0 mg Zn kg^–1 soil significantly alleviated the B stress damages, however, the ameliorative effect of Zn was vanished by application of higher Zn concentrations. Evaluation of the antioxidant enzymes (superoxide dismutase [SOD], catalase [CAT], or ascorbate peroxidase [APX]) and non-enzyme antioxidants (ascorbate and phenolic compounds) revealed that the protective effects of Zn-Gly against B stress are due to enhancement of cell antioxidant defense. In conclusion, application of Zn-Gly for reducing oxidative stress pressure in pistachio plants grown under B disorder was suggested.     

Effect of Piriformospora indica and Azospirillum strains from saline or non-saline soil on mitigation of the effects of NaCl

Salinity toxicity is a worldwide agricultural and eco-environmental problem. The intent of this study was to determine the salt tolerance of Piriformospora indica and strains of Azospirillum, isolated from non-saline and saline soil, as well as to determine their affect on the tolerance of wheat to soil salinity. In this study, an experiment was conducted to investigate the salt stress tolerance abilities of the endophytic fungi, P. indica, and Azospirillum strains, isolated from non-saline and saline soil, at five NaCl levels (0, 0.1, 0.2, 0.3, 0.4, 0.5 mol L^?1). Additionally, a greenhouse experiment was conducted to test the effects of these selected microorganisms under increasing salinity levels on seedling growth, solute accumulation (proline and sugars), and photosynthetic pigments (Chl a, b, ab) of seedling wheat. Azospirillum strains were isolated in Iran from the root of field-grown maize from non-saline soil with an EC = 0.7 dS m^?1 and from saline soil with an EC = 4.7 dS m^?1. Plants were irrigated with non-saline water–tap water with an electrical conductivity water (ECw) value of 0.2 dS m^?1, as well as low, moderate and severe saline water-irrigation with saline water with an ECw of 4 dS m^?1, 8 dS m^?1 and 12 dS m^?1, respectively. The upper threshold of P. indica salinity tolerance was 0.4 mol L^?1 NaCl in both liquid and solid broth medium. The upper thresholds of the salt adapted and non-adapted Azospirillum strains were 0.2 and 0.4 mol L^?1 NaCl, respectively. The results indicated a positive influence of the organisms on salinity tolerance, more with the saline-adapted Azospirillum strains than the non-adapted strains. P. indica was more effective than the Azospirillum strains. These results could be related to a better water status, higher photosynthetic pigment contents and proline accumulation in wheat seedlings inoculated with P. indica. The benefits of both isolates and P. indica depended on two factors: water salinity and growth stage of the host plant. Inoculation with the two isolates increased salinity tolerance of wheat plants; the saline-adapted Azospirillum strains showed better performance with respect to improved fresh and dry weights at 80 and 100 days after sowing under both non-saline and saline conditions. When compared to plants inoculated with non-saline-adapted Azospirillum strains, those inoculated with adapted Azospirillum strains had much better performance with respect to the presence of photosynthetic pigment (Chl a, b and ab) and proline accumulation. Overall, these results indicate that the symbiotic association between P. indica fungus and wheat plants improved wheat growth, regardless of the salinity. It is concluded that the mechanisms for protecting plants from the detrimental effects of salinity by P. indica fungus and Azospirillum strains may differ in their salinity tolerance and influence the uptake of water, photosynthetic pigment contents and proline accumulation in wheat seedlings.     

EFFECTS OF WATER SALINITY ON GROWTH INDICES AND PHYSIOLOGICAL PARAMETERS IN SOME PISTACHIO ROOTSTOCKS

Pistachio is one of the most important horticultural crops in Iran. The majority of the pistachio producing regions is located in arid and semi-arid areas with saline conditions. Therefore, selection of suitable rootstocks is important for increasing yield efficiency of this important nut crop. In this study, the effect of four water salinity levels (0.75, 5, 10 and 15 ds m^?1) on growth indices and physiological parameters of four Pistacia vera L. rootstocks (Badami-e-Zarand A, Badami-e-Zarand B, Qazvini, and Sarakhs) were investigated under greenhouse conditions. After treatment for three months, leaf dry weight was reduced by about 30-50% at an irrigation water electrical conductivity (EC_w) of 10 ds m^?1. Badami-e-Zarand B was the most vigorous rootstock at the highest EC. Decreases in root and stem dry weight (average of all rootstocks combined) occurred at water salinity of 10 ds m^?1. Chemical analysis of shoot and root indicated that the salinity affected the concentration and distribution of sodium (Na⁺), potassium (K⁺), and calcium (Ca²⁺) in pistachio rootstocks. The concentrations of Na⁺ and K⁺ increased with a rise in water salinity levels. Comparison between Na⁺ concentration of shoot and root showed that all examined rootstocks limited the Na⁺ transportation to shoot tissue up-to 15 ds m^-1, and retained it in the roots. However, this ability was less in the Sarakhs rootstock. Based on measured parameters, Badami-e-Zarand B and Sarakhs could be considered as tolerant and sensitive pistachio rootstocks to water salinity, respectively.     

Quality Control of Widely Used Therapeutic Recombinant Proteins by a Novel Real-Time PCR Approach

Background:

Existence of bacterial host-cell DNA contamination in biopharmaceutical products is a potential risk factor for patients receiving these drugs. Hence, the quantity of contamination must be controlled under the regulatory standards. Although different methods such as hybridization assays have been employed to determine DNA impurities, these methods are labor intensive and rather expensive. In this study, a rapid real-time PCR test was served as a method of choice to quantify the E. coli host- cell DNA contamination in widely used recombinant streptokinase (rSK), and alpha interferon (IFN-α) preparations.

Methods:

A specific primer pair was designed to amplify a sequence inside the E. coli 16S rRNA gene. Serial dilutions of DNA extracted from E. coli host cells, along with DNA extracted from Active Pharmaceutical Ingredients of rSK, and IFN-α samples were subjected to an optimized real-time PCR assay based on SYBR Green chemistry.

Results:

The test enabled us to detect a small quantity of genomic DNA contamination as low as 0.0002 pg in recombinant protein-based drugs. For the first time, this study showed that DNA contamination in rSK and IFN-α preparation manufactured in Pasteur Institute of Iran is much lower than the safety limit suggested by the US FDA.

Conclusion:

Real-time PCR is a reliable test for rapid detection of host-cell DNA contamination, which is a major impurity of therapeutic recombinant proteins to keep manufacturers’ minds on refining drugs, and provides consumers with safer biopharmaceuticals. Key Words: DNA contamination, Real-time PCR, Streptokinase, Interferon-alpha (IFN-α)