Proteomic analysis of membrane preparations from developing Pinus radiata compression wood

For coniferous gymnosperms, few data exist as to the contribution of the membrane-associated proteome to cell wall and wood formation. In this study, we begin to address this knowledge deficiency by examining the proteomic profile of Golgi-enriched membrane preparations derived from developing Pinus radiata compression wood. These membrane preparations were generated by a combination of discontinuous sucrose gradient centrifugation and Triton X-114-based phase separation. Fractionation by phase separation removed contaminating proteins associated with the cytoskeleton and enabled the discrimination between soluble and membrane-bound/integral proteins. The proteomic analysis of the resulting aqueous and detergent phases using high-performance liquid chromatography-tandem mass spectrometry resulted in the identification of 175 proteins. The majority of the identified proteins were membrane bound/integral and originated from cellular components such as the nucleus, plastids, endoplasmic reticulum, plasma membrane and Golgi vesicles. On the basis of bioinformatic analysis, many of the identified proteins were predicted to be involved either in the regulation of wood formation or in cell wall biosynthesis, which indicated that the proteomic analysis of non-cytosolic proteins in developing xylem is a useful strategy to investigate the molecular aspects of wood formation in pine.     

Fluxes of Ca(2+), K(+) and Cl(-) across the surfaces of detached needles from Sitka spruce trees: pathways and compartmentation

Uptake and efflux of (36)Cl(-), (45)Ca(2+) and (42)K(+) were measured in water-infiltrated detached needles from Sitka spruce (Picea sitchensis (Bong.) Carr.) trees incubated in 1 mol m(-3) KCl or CaCl(2) or 2 mol m(-3) NaCl solutions or in artificial rain water containing mmol m(-3) amounts of these ions. Surface efflux was measured separately from leakage from the cut ends of the needles. Needles loaded with (36)Cl(-) and killed in liquid N(2) before elution displayed a rapid and extensive loss of radioisotope, indicating that mesophyll cell membranes were the limiting factor for (36)Cl(-) exchange. Data for live needles revealed a novel phase of (36)Cl(-) efflux, with an exchange halftime of about 20 min, which was faster than that for either the vacuole or the cytoplasm, but much slower than that for the free space. The novel phase was interpreted as representing diffusion of Cl(-) through the predominantly negatively charged cuticle. Killing needles loaded with (45)Ca(2+) or (42)K(+) also increased efflux relative to that from live needles, but only to a limited degree, indicating that the main factor limiting cation efflux was the cuticle. During the first hours of (45)Ca(2+) uptake, the isotherms displayed a shoulder, indicating that there was a significant Donnan free space phase in the cuticle for Ca(2+). A shoulder was absent from (42)K(+) uptake isotherms because of the preferential adsorption of divalent cations on the exchange sites.     

Application of real options theory to forestry investment analysis

This paper demonstrates the utility of the real options approach to forestry investment analysis. The main objectives are to discuss the real option theory and show how it can be adopted to model uncertainty and managerial flexibility in forest management and investment. Secondly, we show how to calculate the option values of selected options that may be available to managers of forest industry firms. The paper provides an empirical application, which compares a forestry investment using the static Faustmann model and the real options approach. Four management options are used for the real options approach: an option to delay reforestation, an option to expand the size of the wood processing plant, an option to abandon the processing plant if timber prices fall below a certain level or due to corporate take-over, and multiple options that evaluated all three options together. All options were evaluated using the binomial option-pricing model, where timber values are assumed to follow a multiplicative binomial process. The results show that the Faustmann analysis rejected the investments as unprofitable, while the option analysis showed that all three options were highly valuable if exercised. When real options are considered, the traditional Faustmann model for assessing the profitability of a forestry investment may fail to provide an adequate decision-making framework because it does not properly value management's ability to adjust to shocks in the economy, as well as risks and uncertainty.     

Modeling the effect of initial planting density on within tree variation of stiffness in loblolly pine

Context

Modulus of elasticity (MOE) is an important mechanical property determining the end-use and value of loblolly pine (Pinus taeda L.) lumber.

Aim

In this study, a model was developed to predict the within tree variation of MOE, from pith-to-bark and stump-to-tip, using data collected from a 21-year-old unthinned stand where trees were planted under seven initial stand density levels (746?C2,243 trees/hectare).

Methods

The study was laid out in a randomized complete block design, with seven levels of initial planting density, replicated three times. Seven trees were destructively sampled from each plot, and bolts were cut from each tree at heights of 2.4, 7.3, and 12.2?m. Static bending samples (of dimension 2.5?×?2.5?×?40.6?cm) representing pith-to-bark variation were cut from each bolt and MOE measured. A three-parameter logistic function was used to model the pith-to-bark variation in stiffness with distance from pith as an explanatory variable.

Results

Based on the final fitted model, it was found that the asymptotic parameter (maximum outerwood MOE?=?13.48?GPa) was not influenced by sampling height, initial planting density, and stem slenderness. However, the inflection and scale parameters were significantly influenced by these variables.

Conclusions

In summary, we found that initial planting density had a significant influence on the amount of corewood produced with higher initial planting densities producing a lower proportion of corewood as indicated by a linear decrease in inflection point with an increase in planting density.     

Floristic regeneration in five types of teak plantations in Thailand

Teak is the most important timber species in northern Thailand, and as such, large areas of teak forest have been disturbed or become highly degraded. Teak plantations have been established on this highly degraded land, where the rate of natural recovery is relatively slow. At the study site, five mixed or pure teak plantation types have been established to ameliorate limiting soil properties in order that long-term productivity is maintained. Observations within these plantations in northern Thailand have suggested that native species become established naturally under the shade of a “nurse” plantation, one that shades out early successional species. The objective of this study was to investigate the influence of the number of species in nurse plantations on the diversity and number of seedlings representative of mature native forests that become established within the plantations. Five types of plantations were investigated: (1) Tectona grandis L.f. (T); (2) T.grandis and Tamarindus indica L. (TT); (3) T.grandis and Gmelina arborea Roxb. (TG); (4) T.grandis, T. indica and G. arborea (TTG); (5) T.grandis, T.indica and Anacardium occidentale L. (TTA). These plantations were established primarily for the production of T.grandis (teak), with the other species introduced as economic trees. The plantations were surrounded by native stands of species representative of late successional and mature teak forests. In each of the plantations studies measurements were made on species density, species diversity, and evenness of plants regenerating in the understorey. Results showed that plantations consisting of several species in the overstorey had a higher diversity of native forest species in the understorey than the single-species plantation. Mixed plantation types were also found to reduce the density of the grass Imperata cylindrica (L.) P. Beauv. Consideration of the establishment of woody species found that TG and TTA had high densities of trees and shrubs. This suggested that if the goal of management was to regenerate forest with a high diversity of tree species similar to that found in native mature forests, multiple-species plantations, especially TG and TTA, would be more effective nurse communities than the single-species plantation in providing an environment into which seeds of native species could disperse and germinate. In addition, several climax species, such as Xylia xylocarpa (Roxb.) Taub. var. kerrii (Craib & Hutch) I.C. Nielsen, Pterocarpus macrocarpus Kurz, Largerstroemia sp., Afzelia xylocarpa (Kurz) Craib, Lannea coromandelica (Houtt) Merr., Spondias pinnata (L.f.) Kurz, Garuya pinnata Roxb., Terminalia mucronata Craib & Hutchison, Diospyoros mollis Griff., Irvingia malayana Oliv. ex Benn., Milletia leucantha Kurz, Dalbergia oliviri Gamble ex Prain, Chukrasia tabularis A. Juss and Schleichera oleosa (Lour.) Oken, were found in the early stages of succession, thus indicating that some may be suitable for planting in future restoration processes in order to accelerate natural succession and provide economic returns to managers.     

Determination of N-nitrosodimethylamine levels in some Canadian 2,4-D amine formulations

Levels of N-nitrosodimethylamine (NDMA) were determined in 112 samples of 2,4-dichlorophenoxyacetic acid, (2,4-D), formulated as the dimethylamine salt, collected over a 2 year period from products on the Canadian market. A sample aliquot is partitioned with dichloromethane, and the co-extracted dimethylamine is removed by cleanup on a silica gel column. The eluates containing NDMA are concentrated, an internal standard of N-nitrosodipropylamine is added, and nitrosamine levels are determined using a gas chromatograph interfaced with a thermal energy analyzer. Recoveries of NDMA and N-nitrosodiethylamine spiked into samples were 103 +/- 16 and 96.3 +/- 9.8%, respectively. Of the 112 samples analyzed, 92 were below 1 part per million (ppm) relative to the amount of 2,4-D in the samples, 16 were between 1 and 5 ppm, and 4 were greater than 5 ppm. The gas chromatographic column used is compared to a conventional packing material for volatile nitrosamine analysis. Formation of NDMA during cleanup and analysis was shown not to occur.