Water savings, nutrient leaching, and fruit yield in a young avocado orchard as affected by irrigation and nutrient management

This project was designed to determine the effect of fertilizer rate and irrigation scheduling on water use, nutrient leaching, and fruit yield of young avocado trees (Persea americana Mill. cv. Simmonds). Seven nutrient and irrigation management practices were evaluated: (1) irrigation based on crop evapotranspiration (ET) with 50% fertilizer at a standard rate (FSR); (2) ET irrigation with FSR (typical for avocado production in the area); (3) ET irrigation with 200% FSR; (4) irrigation based on exceedance of 15-kPa (SW) soil water suction with 50% FSR; (5) SW with FSR; (6) SW with 200% FSR; and (7) irrigation at a set schedule (based on timing and frequency typically used in local avocado production) with FSR. The SW with FSR treatment saved 87% of the water volume applied and reduced total phosphorus leached by 74% compared to the set schedule irrigation with FSR. The SW with FSR treatment had higher avocado fruit production, tree water-use efficiency, and fertilizer-use efficiency than the other six treatments. Thus, the use of soil water monitoring for irrigation management can substantially increase sustainability of young avocado orchards in southern Florida.     

Evaluation of splenectomy as a risk factor for gastric dilatation-volvulus

Objective-To evaluate whether dogs undergoing splenectomy had an increased risk of gastric dilatation-volvulus (GDV), compared with a control group of dogs undergoing enterotomy. Design-Retrospective case-control study. Animals-219 dogs that underwent splenectomy for reasons other than splenic torsion (splenectomy group; n = 172) or enterotomy (control group; 47) without concurrent gastropexy. Procedures-Medical records were reviewed for information on signalment, date of surgery, durations of surgery and anesthesia, reason for splenectomy, histopathologic findings (if applicable), whether gastropexy was performed, duration of follow-up, and date of death (if applicable). Follow-up information, including occurrence of GDV, was obtained via medical records review and a written client questionnaire. Results-Reasons for splenectomy included splenic neoplasia, nonneoplastic masses, infarction, traumatic injury, and adhesions to a gossypiboma. Incidence of GDV following surgery was not significantly different between dogs of the splenectomy (14/172 [8.1 %]) and control (3/47 [6.4%]) groups. Median time to GDV for the 17 affected dogs was 352 days (range, 12 to 2,368 days) after surgery. Among dogs that underwent splenectomy, sexually intact males had a significantly higher incidence of GDV (4/16) than did castrated males and sexually intact or spayed females (10/156). Incidence of GDV among sexually intact male dogs did not differ between groups. Conclusions and Clinical Relevance-Results did not support a recommendation for routine use of prophylactic gastropexy in dogs at the time of splenectomy. Other patient-specific risk factors should be assessed prior to recommending this procedure.     

Impact of foot-and-mouth disease on mastitis and culling on a large-scale dairy farm in Kenya

Foot and mouth disease (FMD) is a highly transmissible viral infection of cloven hooved animals associated with severe economic losses when introduced into FMD-free countries. Information on the impact of the disease in FMDV-endemic countries is poorly characterised yet essential for the prioritisation of scarce resources for disease control programmes. A FMD (virus serotype SAT2) outbreak on a large-scale dairy farm in Nakuru County, Kenya provided an opportunity to evaluate the impact of FMD on clinical mastitis and culling rate. A cohort approach followed animals over a 12-month period after the commencement of the outbreak. For culling, all animals were included; for mastitis, those over 18 months of age. FMD was recorded in 400/644 cattle over a 29-day period. During the follow-up period 76 animals were culled or died whilst in the over 18 month old cohort 63 developed clinical mastitis. Hazard ratios (HR) were generated using Cox regression accounting for non-proportional hazards by inclusion of time-varying effects. Univariable analysis showed FMD cases were culled sooner but there was no effect on clinical mastitis. After adjusting for possible confounders and inclusion of time-varying effects there was weak evidence to support an effect of FMD on culling (HR = 1.7, 95% confidence intervals [CI] 0.88-3.1, P = 0.12). For mastitis, there was stronger evidence of an increased rate in the first month after the onset of the outbreak (HR = 2.9, 95%CI 0.97-8.9, P = 0.057).

Electronic supplementary material

The online version of this article (doi:10.1186/s13567-015-0173-4) contains supplementary material, which is available to authorized users.     

The chemical genomic portrait of yeast: uncovering a phenotype for all genes

Genetics aims to understand the relation between genotype and phenotype. However, because complete deletion of most yeast genes ( approximately 80%) has no obvious phenotypic consequence in rich medium, it is difficult to study their functions. To uncover phenotypes for this nonessential fraction of the genome, we performed 1144 chemical genomic assays on the yeast whole-genome heterozygous and homozygous deletion collections and quantified the growth fitness of each deletion strain in the presence of chemical or environmental stress conditions. We found that 97% of gene deletions exhibited a measurable growth phenotype, suggesting that nearly all genes are essential for optimal growth in at least one condition.     

JMPR 农药残留急性膳食摄入量计算方法

农药残留急性膳食风险评估直到最近才引起大家的关注。目前，粮农组织和世界卫生组织农药残留联席会议（JMPR）研究国际范围农药急性膳食风险评估；美国、英国、荷兰、澳大利亚和新西兰也开始进行国家农药急性膳食风险评估。农药急性膳食风险是急性或短期接触毒性与农药急性膳食摄入量的函数。急性膳食接触量评估常用的方法有：定点或确定性方法和概率模型法。在确定性方法中选取食物的大部分人群消耗量和高残留量来计算膳食摄入量，为了解决混合样品中食品个体之间的残留差异，在计算中引入了变异因子。JMPR根据具体情况分为情形1、情形2a、情形2b、情形3来计算农药急性膳食摄入量。中国应该尽快建立健全膳食结构和农产品性状数据库，建立健全市场中农产品的农药残留数据库，并在高毒和中等毒性农药登记前应采用JMPR的确定性方法，进行急性膳食风险评估，提高农药膳食摄入的安全性。     

Crystal structure of the long-chain fatty acid transporter FadL

The mechanisms by which hydrophobic molecules, such as long-chain fatty acids, enter cells are poorly understood. In Gram-negative bacteria, the lipopolysaccharide layer in the outer membrane is an efficient barrier for fatty acids and aromatic hydrocarbons destined for biodegradation. We report crystal structures of the long-chain fatty acid transporter FadL from Escherichia coli at 2.6 and 2.8 angstrom resolution. FadL forms a 14-stranded beta barrel that is occluded by a central hatch domain. The structures suggest that hydrophobic compounds bind to multiple sites in FadL and use a transport mechanism that involves spontaneous conformational changes in the hatch.