Combining the use of molecular techniques and archival documentary evidence to trace the origin of <Emphasis Type="Italic">Populus alba</Emphasis> in a Central Mediterranean archipelago

The nativity of Populus alba in the Mediterranean has only been confirmed in the last decade, following the discovery of 8,000-year-old leaf imprints in Southern France. Recent evidence has even emerged from molecular studies suggesting that the species is native to some of the islands, and these populations may be relicts of a native flora that arrived there much earlier than previously thought. In view of this, samples obtained from the Central Mediterranean archipelago of Malta and other neighbouring regions were analysed to determine the native status of the Maltese populations and possibly trace their origins. All 38 samples were investigated in order to assess the genetic diversity and origin of Maltese trees. Nuclear microsatellite analysis revealed that all 28 trees sampled from the two islands of Malta belonged to one clone. Chloroplast data suggested relatedness of the Maltese clone to Italian P. alba samples. However, nuclear data suggested additional admixture through pollen from North Africa. Existing archival and palaeontological records were also examined for any supporting evidence. On considering the latter records in combination with molecular evidence, we arrived to the conclusion that arrival of this clone in Malta through human introduction in the sixteenth century is the most likely explanation, since alternative scenarios like autovegetative propagation or arrival by seed seem highly unlikely.     

Acclimatation of three co-occurring tree species to water stress and their role as site indicators in mixed pine-oak forests in the Sierra Madre Oriental,Mexico

Water availability and salt excess are limiting factors in Mexican mixed pine-oak forest. In order to characterise the acclimatation of native species to these stresses, leaf water (Ψ_w) and osmotic potentials (Ψ_s) of Juniperus flaccida, Pinus pseudostrobus and Quercus canbyi were measured under natural drought and non-drought conditions under two different aspects in the Sierra Madre Oriental. Factorial ANOVA revealed significant differences in Ψ_w and Ψ_s between two aspects, species and sampling dates. In general, all species showed high predawn and low midday values that declined progressively with increasing drought and soil–water loss. Seasonal and diurnal fluctuation of Ψ_w and Ψ_s were higher for J. flaccida and Q. canbyi than for P. pseudostrobus. Leaf Ψ_w and Ψ_s were mainly correlated with soil water content, while Ψ_s of P. pseudostrobus were hardly correlated with environmental variables. Thus, species have different strategies to withstand drought. P. pseudostrobus was identified as a species with isohydric water status regulation, while J. flaccida and Q. canbyi presented water potential patterns typical for anisohydric species. The type of water status regulation may be a critical factor for plant survival and mortality in the context of climate change. Nevertheless, for precise conclusions about the advantages and disadvantages of each type, further long-term investigations are required.     

Fine-scale spatial genetic structure of sycamore maple (<Emphasis Type="Italic">Acer pseudoplatanus</Emphasis> L.)

Knowledge of SGS in plants is vital to understand the ecological and evolutionary dynamics of populations and to plan conservation strategies. Some of the major factors that can affect spatial genetic structure (SGS) in plants are the level of gene flow, spatial arrangement and life stages of individuals within populations. Applying six highly variable microsatellite markers, we investigated the effect of these factors on spatial genetic structure selecting two natural populations of sycamore maple, which is an insect-pollinated, autotetraploid and an indigenous hardwood species in Germany and in other central European countries. The two study populations had different shapes (“compact” and “elongated”) and tree densities. Significant SGS extended to ~180 m in the elongated population and to ~35 m in the compact population. Juvenile plants of the compact population showed significant SGS up to 40 m. Estimate of Sp statistic in high-density population was almost double of that in the population with low density. Gene dispersal distance in the low-density population was about 9 times higher than in the population with high density. The similar level of significant SGS in both adult and juvenile plants suggested minimal or no effect of life stages of individuals on SGS in the sycamore maple population. The data presented in this study can provide guidelines for seed collection and to establish populations for the conservation and management of genetic resources of the species.     

Drought and frost resistance of trees: a comparison of four species at different sites and altitudes

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Drought and frost resistances are key factors for the survival and distribution of tree species.     

Impacts of initial stand density and thinning regimes on energy wood production and management-related CO<Subscript>2</Subscript> emissions in boreal ecosystems

An ecosystem model (Sima) was utilised to investigate the impact of forest management (by changing both the initial stand density and basal area thinning thresholds from current recommendations) on energy wood production (at energy wood thinning and final felling) and management-related carbon dioxide (CO₂) emissions for the energy wood production in Finnish boreal conditions (62°39′ N, 29°37′ E). The simultaneous effects of energy wood, timber and C stocks in the forest ecosystem (live and dead biomass) were also assessed. The analyses were carried out at stand level during a rotation period of 80 years for Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies L. Karst.) growing in different fertility sites. Generally, the results showed that decreased basal area thinning thresholds, compared with current thinning, reduced energy wood (logging residues) and timber production, as well as carbon stocks in the forest ecosystem. Conversely, increased thinning thresholds increased energy wood production (ca. 1–27%) at both energy wood thinning and final felling and reduced CO₂ emissions (ca. 2–6%) related to the production chain (e.g. management operations), depending on the thinning threshold levels, initial stand density, species and site. Increased thinning thresholds also enhanced timber production and carbon stocks in the forest ecosystem. Additionally, increased initial stand density enhanced energy wood production for energy wood thinning for both species, but this reduced energy wood production at final felling for Scots pine and Norway spruce. This study concluded that increases in both initial stand density and thinning thresholds, compared with the current level, could be useful in energy wood, timber and carbon stocks enhancement, as well as reducing management-related CO₂ emissions for energy wood production. Only 2.4–3.3% of input of the produced energy (energy wood) was required during the whole production chain, depending on the management regime, species and sites. However, a comprehensive substitution analysis of wood-based energy, in respect to environmental benefits, would also require the inclusion of CO₂ emissions related to ecosystem processes (e.g. decomposition).     

Chromosome locations of leaf rust resistance genes in selected tetraploid wheats through substitution lines

Langdon durum D-genome disomic substitution lines were used to study the chromosome locations of adult-plant leaf rust resistance genes identified from tetraploid wheat accessions. The accessions are 104 (Triticum turgidum subsp. dicoccum var. arras) and 127 (T. turgidum subsp. durum var. aestivum). The complete sets of the substitution lines were crossed as female parents with the accessions and F₁ double monosomic individuals selected at metaphase I. Segregating F₂ individuals were inoculated during the flag leaf stage with pathotype UVPrt2 of Puccinia triticina. The substitution analysis involving accession 104 showed that the gene for leaf rust resistance is located on chromosome 6B. The analysis with accession 127 indicated that chromosome 4A carries a gene for leaf rust resistance. The two novel genes are temporarily designated as Lrac104 and Lrac127, respectively from accessions 104 and 127.     

“Aberrant” plants in cauliflower: 2. Aneuploidy and global DNA methylation

Aberrant phenotypes of cauliflower were detected throughout the cultivation period and in any variety type. The rate of these phenotypes in the field has recently increased. We reported previously on the first part of our results which showed that (1) the rate of aberrant plants varied with genotype and cultivation area, (2) the aberrant phenotypes can evolve or reverse to normality during the plant cycle and (3) the capacity to express a variant phenotype can be transmitted to the progeny. An epigenetic hypothesis has been proposed to explain the determinism of the phenomenon. Further investigation on the “aberrant” character focussed on the flow cytometric estimation of ploidy levels and on the parallel observation of meiosis. Only a fraction of aberrant plants did show aneuploidy and various ploïdy levels were found for the same phenotype. Indeed, aneuploidy could not be related to the aberrant phenotype although it could probably be a consequence of the aberration phenomenon. HPLC analysis of global DNA methylation rates showed that DNA hypermethylation occurred in plants which exhibited an evolution of their phenotype during vegetative cycle. The epigenetic origin of aberrant phenotypes in cauliflower is discussed with reference to epigenetic diseases described in human beings.     

Comparative analysis of diversity based on morpho-agronomic traits and microsatellite markers in common bean

Morpho-agronomic traits and microsatellite markers were used to survey genetic diversity in 115 common bean genotypes that included 70 Indian landraces, 24 released varieties and 21 exotic accessions. Twelve morpho-agronomic traits, namely, days to 50% flowering, leaflet length, leaflet width, pod length, pod width, number of pods per plant, days to maturity, seed length, seed width, number of seeds per pod, 100 seed weight and seed yield per plant were studied. Field data of two consecutive years were subjected to multivariate analysis as proposed by Mahalanobis’s D²-statistics, Tochers method of clustering and combined analysis of variance. Seventeen microsatellite markers were also used to examine genetic diversity at molecular level that showed polymorphic information content (PIC) in the range of 0.00–0.684. Dendrograms based on Euclidean distances and UPGMA analysis showed the presence of majority of released varieties into single cluster, which pointed toward their low genetic base in comparison to indigenous landraces and exotic germplasm. Significant correlation existed between morphological genetic distance and microsatellite genetic distance tested by Mantel test (r = 0.876).     

Allelic changes in bread wheat cultivars were associated with long-term wheat trait improvements

Genetic impacts under selective breeding of agricultural crops have been frequently investigated with molecular tools, but inadequate attention has been paid to assess genetic changes under long-term genetic improvement of plant traits. Here we analyzed allelic changes with respect to wheat trait improvement in 78 Canadian hard red spring wheat cultivars released from 1845 to 2004 and screened with 370 mapped SSR markers. The improvements in quality, maturity, yield, disease, stem rust, leaf rust, sawfly resistance, and agronomy were considered. A total of 154 (out of 370) loci with significant allelic changes across 21 chromosomes were detected in the 78 wheat cultivars separated into improved versus non-improved groups for eight traits. The number of significant loci for improving a trait ranged from four for quality to 68 for yield and averaged 35. Many more loci with significant allelic reduction for improving a trait were detected than those with significant allelic increase. Selection for early maturity introduced more alleles, but improving the other traits purged more alleles. Significantly lower numbers of unique alleles were found in the cultivars with improved traits. The distributions of unique allele counts also varied greatly across the 21 chromosomes with respect to trait improvement. Significant SSR variation between two cultivar groups was observed for improvement in seven traits, but not in stem rust. The proportional SSR variation residing between two groups ranged from 0.014 to 0.118. The proportional SSR variations within the improved cultivar groups consistently were much lower than those within the non-improved groups. These findings clearly demonstrate the association between allelic changes and wheat trait improvements and are useful for understanding the genetic modification of the wheat genome by long-term wheat breeding.