Tracing the origin and fate of NOx in the Arctic atmosphere using stable isotopes in nitrate

Atmospheric nitrogen oxides (NOx =NO+ NO2) play a pivotal role in the cycling of reactive nitrogen (ultimately deposited as nitrate) and the oxidative capacity of the atmosphere. Combined measurements of nitrogen and oxygen stable isotope ratios of nitrate collected in the Arctic atmosphere were used to infer the origin and fate of NOx and nitrate on a seasonal basis. In spring, photochemically driven emissions of reactive nitrogen from the snowpack into the atmosphere make local oxidation of NOx by bromine oxide the major contributor to the nitrate budget. The comprehensive isotopic composition of nitrate provides strong constraints on the relative importance of the key atmospheric oxidants in the present atmosphere, with the potential for extension into the past using ice cores.     

The ecoresponsive genome of Daphnia pulex

We describe the draft genome of the microcrustacean Daphnia pulex, which is only 200 megabases and contains at least 30,907 genes. The high gene count is a consequence of an elevated rate of gene duplication resulting in tandem gene clusters. More than a third of Daphnia's genes have no detectable homologs in any other available proteome, and the most amplified gene families are specific to the Daphnia lineage. The coexpansion of gene families interacting within metabolic pathways suggests that the maintenance of duplicated genes is not random, and the analysis of gene expression under different environmental conditions reveals that numerous paralogs acquire divergent expression patterns soon after duplication. Daphnia-specific genes, including many additional loci within sequenced regions that are otherwise devoid of annotations, are the most responsive genes to ecological challenges.     

Increased N availability in grassland soils modifies their microbial communities and decreases the abundance of arbuscular mycorrhizal fungi

Two complementary studies were performed to examine (1) the effect of 18 years of nitrogen (N) fertilization, and (2) the effects of N fertilization during one growing season on soil microbial community composition and soil resource availability in a grassland ecosystem. N was added at three different rates: 0, 5.44, and 27.2 g N m⁻² y⁻¹. In both studies, Schizachyrium scoparium was the dominant plant species before N treatments were applied. Soil microbial communities from each experiment were characterized using fatty acid methyl ester (FAME) analysis. Discriminant analysis of the FAMEs separated the three N fertilizer treatments in both experiments, indicating shifts in the composition of the microbial communities. In general, plots that received N fertilizer at low or high application rates for 18 years showed increased proportions of bacterial FAMEs and decreased fungal FAMEs. In particular, control plots contained a significantly higher proportion of fungal FAMEs C18:1(cis9) and C18:2(cis9,12) and of the arbuscular mycorrhizal fungal (AMF) FAME, C16:1(cis11), than both of the N addition treatment plots. A significant negative effect of N fertilization on the AMF FAME, C16:1(cis11), was measured in the short-term experiment. Our results indicate that high rates of anthropogenic N deposition can lead to significant changes in the composition of soil microbial communities over short periods and can even disrupt the relationship between AMF and plants.     

The effects of organic amendments on the interactions between a nematophagous fungus Arthrobotrys oligospora and the root-knot nematode Meloidogyne mayaguensis parasitizing tomato plants

The aim of this study was to examine the effects of amendments with leaf biomass on the development of tomato plants in a soil where root-knot nematodes (Meloidogyne mayaguensis) and/or a nematophagous fungus (Arthrobotrys oligospora, strain ORS 18697) had been inoculated. Six origins of leaf biomass were chosen: Acacia mangium, Acacia holosericea, Eucalyptus camaldulensis, Casuarina equisetifolia, Azadirachta indica and Sorghum vulgare. These leaf biomass types inhibited the development of the aerial parts of the tomato plants. This negative effect was not observed when the fungus was inoculated. On the contrary, plant growth was stimulated. Moreover, the antagonistic activity of Arthrobotrys oligospora was strengthened in the presence of ground leaf powder, especially that from Acacia holosericea. The effects of phenolic compounds on fungal growth and predatory activity and on plant growth are discussed.     

Effect of seeders and tillage equipment on vertical distribution of oilseed rape stubble

When the spreading of a disease depends on the proportion of infected residues remaining at soil surface it is of crucial importance to analyse the effects of tillage practices on the vertical distribution of stubble. This is the case with phoma stem canker (blackleg), whose epidemics are initiated in autumn, by air-borne ascospores released from stubble located at the soil surface. We compared initial vertical distribution of oilseed rape residues to those observed after sowing and various tillage operations (rotary harrowing, stubble disking, chiselling and mouldboard ploughing). Almost 20% of the initially buried residue was brought back to soil surface with seeding. Rotary harrow brought 40% of the residue buried in the 0–10 cm layer up to the surface and left unburied about 70% of surface residue. Stubble disking appeared to be more efficient for residue burial than chiselling. Mouldboard plough was the only tool that buried all residues. A simple model was developed that predicted burial and return to the soil surface of potentially infected residues as a function of tillage practices used after harvest. Simulation of different tillage sequences showed that the order in which tools were used also affected location of residues. Our results highlighted the importance of tillage in the cultural control of phoma stem canker and will contribute to the definition of integrated pest management strategies for oilseed rape.     

Geographical distribution of Alzheimer's disease cases at birth and the geochemical profile of Saguenay-Lac-Saint-Jean/Québec,Canada (image project)

Accepting as founded the hypothesis of a multifactorial origin for the Alzheimer's disease (AD), we explore the possible links between the geographical distribution of AD cases according to their birth place and the geochemical profile of the Saguenay-Lac-Saint-Jean (SLSJ) territory in the province of Québec. The method used for factor analysis of correspondances (FAC) and another one based on the differences between the residential and municipal geochemical concentrations (DRMC) have been used for this purpose. The geochemical matrix of SLSJ relates the highest concentrations of nickel, copper and zinc to the sector surrounding the Jonquière municipality. Moreover, high concentrations of iron, lead and manganese were found in the northern sector of the Lac Saint-Jean. The DRMC method corroborates this strong correlation between iron, lead and manganese. Furthermore, these concentrations do not differ from the north-american geochemical standards. No single geochemical element seems to be associate with the spatial distribution of cases. It is, however, still possible that a certain synergistic effect between two or several elements could be implied in the development of the disease. According to the results of the soil analysis, there does not seem to be any association between the spatial distribution of cases and the concentration of aluminum, a chemical element that has been thought to be implied in the etiology of AD. These results are compared with those obtained by other workers in the micronesian islands, where abnormally high frequencies of amyotrophic lateral sclerosis and parkinsonism dementia have already been observed.