Report on the 43rd Annual Meeting of the DPG-Working Group Nematology

Journal of Plant Diseases and Protection -     

Genetic analyses of piglet survival and individual birth weight on first generation data of a selection experiment for piglet survival under outdoor conditions

Genetic parameters of piglet survival traits and birth weight were estimated on the first generation data of a selection experiment aimed at improving piglet survival using a multiple trait linear and threshold model. Data on 5293 piglets for survival at birth, at day one after birth and during the entire nursing period, as well as individual birth weight and litter size, were recorded in an outdoor production system. Genetic effects of piglet survival traits and birth weight were estimated based on threshold and Gaussian models, respectively, using a Bayesian approach. The statistical model included as fixed effects selection group, parity, gender, fostering, gestation length and month of farrowing and, alternatively, an adjustment for litter size. Direct genetic effects (i.e. the piglet's genetic potential) for piglet survival and birth weight were estimated separately, whereas maternal genetic and environmental effects could only be estimated for the given data structure in a combined litter effect. Posterior means of heritabilities for direct genetic effects of survival at birth, at first day after birth and the entire nursing period, as well as birth weight, were 0.08, 0.07, 0.08 and 0.20, respectively. Genetic correlations among survival traits were in the range of 0.29 to 0.40 and indicate that these traits were mainly attributable to different genetic effects. Genetic correlations between direct effects of survival traits and birth weight ranged between 0.18 and 0.23 and were reduced when weights of stillborn piglets were omitted in the analysis or the traits were adjusted for litter size. The magnitudes of direct genetic effects of survival traits are substantially higher than estimates in the literature, which may indicate that these traits have a higher genetic influence under outdoor conditions. The use of birth weight in the multiple trait estimation provided important information for the estimation of survival traits due to its favourable genetic correlations with survival, its high heritability and its high information content as a continuously measured trait.     

Otolith chemistry of triplefin Forsterygion nigripenne indicates estuarine residency

Fisheries Science - Understanding the role different habitats play in the life histories of fishes is important for the development of holistic aquatic ecosystem management plans. We used otolith...     

Measuring compression wood severity in spruce

As the severity of compression wood influences the mechanical and chemical properties of wood it is desirable to be able to measure compression wood severity. However, so far no satisfactory method has been reported in the literature. Here we describe how scanning FTIR micro-spectroscopy can be employed to achieve CW severity measurements on increment cores of Norway spruce (Picea abies (L. Karst.) and Sitka spruce (Picea sitchensis (Bong.) Carrière). Radial wood strips were converted into sawdust by a process that maintained their spatial orientation. Samples prepared in this way were scanned with an FTIR-microscope in reflective mode and from the spectra obtained a CW-indicator was calculated representing aromatic and carboxyl signals. This FTIR CW-indicator correlated well with alternative CW identification techniques (namely microfibril angle, transmitted light and immunolabelling of beta 1–4 galactan), which have been used to validate the method. Repeatability of the measurements was good and no systematic difference between spruce species was found. The achievable resolution of the measurements was of sub-mm order. The CW indicator described offers the opportunity to correlate CW severity with mechanical wood properties in spruce.     

Response of Ugandan common bean varieties to Pseudocercospora griseola and Angular leaf spot disease development in varietal mixtures

Angular leaf spot (ALS) is one of the most economically important bean diseases in Africa. One promising control option for the disease is the use of mixtures of resistant and susceptible varieties. This research evaluated (1) the reaction of farmer preferred bean varieties to ALS in the screenhouse and on-station and (2) the effect of different spatial arrangements of resistant and susceptible bean varieties on ALS disease development. For the latter, five mixture combinations and two controls were laid out in a Randomized Complete Block Design having three replicates. Analysis of variance and least significant differences (LSDs) were used to compare disease levels in both studies above. Varietal screening showed significant differences in varietal reaction to ALS. Screenhouse disease scores ranged between 0 and 5, compared to 0.7–3.9 in the field. For the varietal mixture trial, the lowest disease levels and the highest mixture efficiencies were observed for the combination of equal proportions of the susceptible and resistant varieties randomly mixed (even mixture) prior to planting. We conclude that even mixtures reduce the amount of ALS disease that develops in the season.     

Participatory crop improvement and formal release of <Emphasis Type="Italic">Jethobudho</Emphasis> rice landrace in Nepal

Jethobudho is an aromatic rice landrace of the Pokhara valley in middle hills of Nepal. Although local consumers are willing to pay a high price for its purchase, the landrace has a problem with quality variation. Decentralized participatory population improvement for specific market-identified traits was conducted on “Jethobudho” populations collected from farmers’ fields in seven geographic regions of the valley in Nepal. The preferred post harvest quality traits, field tolerance to blast and lodging, and superior post harvest quality traits of Jethobudho were established by a consumer market survey. These traits were used for screening the materials. 338 sub-populations of Jethobudho were evaluated for yield, disease, lodging resistance, and post harvest quality traits. Significant variation was found for culm strength, neck blast tolerance, awn characteristics, panicle length, number of grains per panicle, test grain weight and post harvest quality traits, whereas no significant variation was found in grain yield, plant height, tiller number, maturity period and leaf blast. Based on these identified traits and micro-milling evaluations, 183 populations were screened in on-farm and on-station nurseries, and in succeeding years populations were further screened by plant breeders and expert farmers in research trials, resulting in the selection of 46 populations for post harvest quality traits. Six accessions with similar agronomic traits, field tolerance to blast and lodging, and superior post harvest quality traits, were bulked and evaluated on-farm using participatory variety selection (PVS). The enhanced Jethobudho accessions were also evaluated for aroma using simple sequence repeat (SSR) and found to have unique aromatic genetic constitution. Community based seed production groups were formed, linked to the Nepal District Self Seed Sufficiency Programme (DISSPRO), and trained to produce basic seeds (truthfully labeled) of Jethobudho. The National Seed Board of Nepal released the enhanced landrace in the name of “Pokhareli Jethobudho” in 2006, as the first bulk variety of traditional high quality aromatic rice improved through participatory plant breeding to be formally released in Nepal for general cultivation under the national seed certification scheme. Landrace improvement is shown as an important option for supporting programmes for in situ conservation of landraces on-farm.     

Traditional seed management and genetic diversity in barley varieties in high-hill agro-ecosystems of Nepal

Chawali and Lekali are two common farmer’s barley varieties or landraces in Jumla, Nepal (2,240–3,000 m) with small to bold grains and wide adaptation from irrigated low lands to high hills. This study was undertaken to test whether features of the traditional seed system can significantly influence the diversity of a crop and its conservation on-farm. In Jumla (high-hill), the barley seed system is completely informal and is mainly from farmer to farmer. In the present study, the seed flows and the pattern of genetic diversity in barley were investigated to detect differences between the two varieties and test the divergence among populations of each variety These data suggested that Chawali, the more common variety, was less subject to homogenising gene flow between farms than was Lekali. A total of 128 farming households were surveyed for seed supply information and 128 populations for each landrace from two villages: Kartikswami and Talium were collected for SSR diversity analysis. Some 92 SSRs were screened in an initial sample of 20 barley populations of both landraces and 2 improved varieties (LG-51 and Soluwa). Of the 81 SSRs that consistently amplified, only 15 SSRs (19%) were polymorphic with gene diversity values ranging from 0.09 to 0.71. A medium to low diversity was detected among the landrace populations of barley varieties. Chawali populations were less polymorphic within ecological groups, and more divergent between than were Lekail populations. This result accords with Chawali having a more conservative local seed system.     

Wound healing in potato tuber tissue. 2. Varietal and anatomical variation

Summary The wound healing potential of 15 UK maincrop potato cultivars was assessed from the ability of discs of cortical and medullary tissue to become resistant to the loss of water vapour, as their surfaces suberized. Varietal rankings were moderately consistent over four experiments in two years, with cvs Désirée, Bintje and Pentland Hawk showing rapid healing and Majestic, Redskin and Pentland Crown rather slow healing. Wound healing rates in cortical and medullary tissue were generally similar. Since fast wound healing is not the dominant mechanism of resistance to disease, correlations with established ratings for resistance to individual diseases were not found, but some protection against a broad spectrum of storage diseases is likely. Wound healing rankings correlated with varietal resistance to mechanical damage.

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Zusammenfassung Die Versuche sollten sortenbedingte Unterschiede bei Wundheilungs-Raten demonstrieren. Ausserdem galt es herauszufinden ob sich Unterschiede im Wundheilungs-Potential zwischen Rinden- und Markgewebe ergeben, wodurch sich die relative Bedeutung von flachen gegenüber tiefen Wunden darstellen würde. Der Anstieg in der internen Widerstandsf?higkeit im Hinblick auf Verlust von Wasser-Dampfdruck von Scheiben von Knollengewebe, ein Mass für die Suberinisierung an Wundoberfl?chen, wurde über 6–9 Tage in vier Versuchen über zwei Lagerperioden verfolgt. Die 15 untersuchten sp?ten Kartoffelsorten zeigten betr?chtliche sortenbedingte Abweichungen in allen vier Experimenten (Tabellen 1 und 2). Zwischen den beiden Perioden waren die Schwankungen nur gering, ebenso zwischen den Untersuchungen im Herbst und im Frühjahr (Tabelle 3). Die H?he des Wasserverlustes bei Rinden- und Markgewebe waren im wesentlichen gleich (Tabelle 2) und korrelierten zwischen den Sorten (r=0,84,P<0,001). In den ersten 4–5 Tagen der Inkubation entwickelte sich die interne Widerstandsf?higkeit gegen Wasserverlust z?gernd, bei ungef?hr 6 Tagen dann schneller (Abb. 1). Sowohl das Ausmass des schnelleren Anstiegs als auch die Zeit des Beginns bestimmten den generellen Grad an Resistenz gegen Wasserverlust über die gesamte Inkubationsperiode (Abb. 1). Sorten mit rapider Wundverheilung in diesen Untersuchungen, z.B. Désirée und Bintje, befanden sich unter denjenigen, welche von Blight & Hamilton (1974) mit geringer Anf?lligkeit gegen mechanische Besch?digung eingestuft worden waren.

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Résumé Le but de cette étude est de mettre en évidence l'importance des variations dans le taux de cicatrisation des blessures selon les variétés et de rechercher s'il existe une différence dans le potentiel de cicatrisation entre les tissus corticaux et médullaires qui pourraient déterminer l'importance relative des blessures légères et profondes. L'augmentation de la résistance interne à la perte en vapeur d'eau à partir de lamelles de tissus de tubercules, comme mesure de subérisation des surfaces blessées, a été suivie pendant 6 à 9 jours dans 4 expérimentations au cours de deux campagnes de conservation. Les 15 principales variétés testées ont montré un degré variétal important dans les 4 essais (tableau 1 et 2). Le classement des variétés n'a guère varié d'une année à l'autre et entre automne et printemps (tableau 3). Les taux de perte en eau des tissus médullaire et cortical sont en général équivalents (tableau 2) et correlés avec les variétés (r=0,84,P<0,001). La résistance interne à la perte en eau évolue lentement les 4–5 premiers jours d'incubation, et plus rapidement après 6 jours environ (fig. 1). La variation dans la phase rapide, et dans sa date de démarrage détermine le niveau global de résistance à la perte en eau pour toute la période d'incubation (fig. 1). Les variétés qui montrent une évolution rapide de cicatrisation dans cette étude, telles que Désirée et Bintje, sont parmi celles estimées par Blight & Hamilton (1974), qui présentent une faible sensibilité à l'endommagement mécanique.

     

Riverine Flux of Metals from Historically Mined Orefields in England and Wales

Water, Air, &; Soil Pollution - The flux of metals at the tidal limits of major rivers are an important metric of freshwater contaminant transfer to marine habitats, reported in Northeast...