Predicting moisture content and density distribution of Scots pine by microwave scanning of sawn timber II: evaluation of models generated on a pixel level

The purpose of this study was to use images from a microwave sensor on a pixel level for simultaneous prediction of moisture content and density of wood. The microwave sensor functions as a line-scan camera with a pixel size of 8mm. Boards of Scots pine (Pinus sylvestris), 25 and 50mm thick, were scanned at three different moisture contents. Dry density and moisture content for each pixel were calculated from measurements with a computed tomography scanner. It was possible to create models for prediction of density on a pixel level. Models for prediction of moisture content had to be based on average values over homogeneous regions. Accuracy will be improved if it is possible to make a classification of knots, heartwood, sapwood, etc., and calibrate different models for different types of wood. The limitations of the sensor used are high noise in amplitude measurements and the restriction to one period for phase measurements.     

Validation of topsoil texture derived from agricultural soil maps by current dense soil sampling

Agricultural soil maps were created to facilitate the management of fields. Such maps, at very large scale (1:5000), cover almost the entire agricultural land in Poland. These maps can be very useful for precision field management. However, they were prepared about 40–50 years ago using old mapping techniques with mainly field (organoleptic) examination of soil. For this reason it is necessary to verify agreement between such maps with the current soil status. In the case of detection of disagreements it is important to identify the causes and propose methods for improving soil maps. Only few studies were made in this aspect. The soil texture (ST) of the upper layer, as presented on the agricultural soil maps from the 1960s and 1970s, was compared with the actual ST of the same four fields in northern and central Poland. For laboratory ST determination, soil samples were collected in a dense sampling network. On average, the agreement of the ST presented on the agricultural soil maps and determined in this study was classified as medium for three fields and good for one field. However, the presence of field areas with poor agreement between the ST determined in this study and that shown on the agricultural maps was detected in all investigated fields. Identified causes for this comprised imprecision of ST determination using the organoleptic method, the generalization of the soil quality maps, and erosion processes during the years between soil mapping and this investigation. The improvement of ST presentation on the large scale soil maps might be achieved by quite denser soil sampling for ST analysis supported by ECa, yield and NDVI maps.     

Expression of hypoxia-inducible factor-1α and vascular density in mammary adenomas and adenocarcinomas in bitches

Background

The study aimed at examining hypoxia-inducible factor (HIF)1α expression in adenocarcinomas and adenomas in bitches in regard to tumour malignancy grade, proliferation, apoptosis and vascularisation. Therefore, paraffin sections of 15 adenomas and 64 adenocarcinomas sampled from 79 dogs aged 6 to 16 years were analysed.

Results

A significantly higher HIF-1α expression was noted in adenocarcinomas in comparison to adenomas (P < 0.0004). Moreover, HIF-1α expression in adenocarcinomas correlated positively with tumour malignancy grade (r = 0.59, P < 0.05), Ki-67 antigen expression (r = 0.43; P < 0.0005), TUNEL-positive cells (r = 0.62, P < 0001) and tumour vascularity measured by quantification of vessels characterized by the expression of von Willebrand Factor (r = 0.57, P < 0.05).

Conclusion

Results of this study indicate a similar biological role of HIF-1α in dogs and in humans, which may confirm suitability of the animal model in investigations on progression of tumours in humans.     

Dissolved and colloidal phosphorus fluxes in forest ecosystems—an almost blind spot in ecosystem research

Understanding and quantification of phosphorus (P) fluxes are key requirements for predictions of future forest ecosystems changes as well as for transferring lessons learned from natural ecosystems to croplands and plantations. This review summarizes and evaluates the recent knowledge on mechanisms, magnitude, and relevance by which dissolved and colloidal inorganic and organic P forms can be translocated within or exported from forest ecosystems. Attention is paid to hydrological pathways of P losses at the soil profile and landscape scales, and the subsequent influence of P on aquatic ecosystems. New (unpublished) data from the German Priority Program 1685 “Ecosystem Nutrition: Forest Strategies for limited Phosphorus Resources” were added to provide up‐to‐date flux‐based information. Nitrogen (N) additions increase the release of water‐transportable P forms. Most P found in percolates and pore waters belongs to the so‐called dissolved organic P (DOP) fractions, rich in orthophosphate‐monoesters and also containing some orthophosphate‐diesters. Total solution P concentrations range from ca. 1 to 400 µg P L^?1, with large variations among forest stands. Recent sophisticated analyses revealed that large portions of the DOP in forest stream water can comprise natural nanoparticles and fine colloids which under extreme conditions may account for 40–100% of the P losses. Their translocation within preferential flow passes may be rapid, mediated by storm events. The potential total P loss through leaching into subsoils and with streams was found to be less than 50 mg P m^?2 a^?1, suggesting effects on ecosystems at centennial to millennium scale. All current data are based on selected snapshots only. Quantitative measurements of P fluxes in temperate forest systems are nearly absent in the literature, probably due to main research focus on the C and N cycles. Therefore, we lack complete ecosystem‐based assessments of dissolved and colloidal P fluxes within and from temperate forest systems.     

Regional Contamination of Moravia (South-Eastern Czech Republic): Temporal Shift of Pb and Zn Loading in Fluvial Sediments

Regional contamination by Pb and Zn in southern Moravia (south-east part of the Czech Republic) in the twentieth century was analysed in Brno Dam lake sediments and in floodplain sediments of the Morava River near Strážnice. The age model for the Brno Dam lake sediments has been obtained by ¹³⁷Cs (maxima corresponding to the nuclear tests in atmosphere and the 1986 Chernobyl accident) and the construction of the dam (1940); the time constraints for the Morava River sediments was the erection of flood defences (1930s) and ²¹⁰Pb dating. In the case of floodplain sediments, profiles exhibiting post-depositional mobilisation of heavy metals by pedogenic processes (gleying) must be excluded to reconstruct the history of contamination. There was a relatively fast joint onset of Pb and Zn load since the early stages of industrialisation in the first half of the twentieth century, but then the concentrations of these two metals developed in a different manner. Pb load only slightly increased till its peak in 1960s and 1970s. The increase of Zn load was rather stepwise: Soon before 1930s (Morava River floodplain) and in 1940s and 1950s (in Brno Lake), the relative contamination by Zn was much lower than during its peak in the 1970s to the present days. The offset of Pb and Zn contamination curves could have been caused by three different artificial sources of these heavy metals. The temporal shift of Pb and Zn loads can be used for dating sediments.     

An inter-laboratory comparison of multi-enzyme and multiple substrate-induced respiration assays to assess method consistency in soil monitoring

The use of indicators in soil monitoring schemes to detect changes in soil quality is receiving increased attention, particularly the application of soil biological methods. However, to date, the ability to compare information from different laboratories applying soil microbiological techniques in broad-scale monitoring has rarely been taken into account. This study aimed to assess the consistency and repeatability of two techniques that are being evaluated for use as microbiological indicators of soil quality: multi-enzyme activity assay and multiple substrate-induced respiration (MSIR). Data were tested for intrinsic (within-assay plate) variation, inter-laboratory repeatability (geometric mean regression and correlation coefficient) and land-use discrimination (principal components analysis). Intrinsic variation was large for both assays suggesting that high replicate numbers are required. Inter-laboratory repeatability showed diverging patterns for the enzyme assay and MSIR. Discrimination of soils was significant for both techniques with relatively consistent patterns; however, combined laboratory discrimination analyses for each technique showed inconsistent correspondence between the laboratories. These issues could be addressed through the adoption of reliable analytical standards for biological methods along with adequate replication. However, until the former is addressed, dispersed analyses are not currently advisable for monitoring schemes.     

Cross-species identification of Mendel's I locus

A key gene involved in plant senescence, mutations of which partially disable chlorophyll catabolism and confer stay-green leaf and cotyledon phenotypes, has been identified in Pisum sativum, Arabidopsis thaliana, and Festuca pratensis by using classical and molecular genetics and comparative genomics. A stay-green locus in F. pratensis is syntenically equivalent to a similar stay-green locus on rice chromosome 9. Functional testing in Arabidopsis of a homolog of the rice candidate gene revealed (i) senescence-associated gene expression and (ii) a stay-green phenotype after RNA interference silencing. Genetic mapping in pea demonstrated cosegregation with the yellow/green cotyledon polymorphism (I/i) first reported by Gregor Mendel in 1866.     

Hydrology influences breeding time in the white-throated dipper

While nitrogen and carbon stable isotope values can reflect ecological segregation, prey choice and spatial distribution in seabirds, the interpretation of bulk stable isotope values is frequently hampered by a lack of isotopic baseline data. In this study, we used compound-specific isotope analyses of amino acids (CSIA-AA) to overcome this constraint and to study interspecific differences, seasonal and historical changes in trophic positions of five seabird species, three penguins and two petrels, from a sub-Antarctic seabird community. CSIA-AA allowed comparing trophic positions of seabirds with temperate and polar distributions. Gentoo and Magellanic penguins had the highest trophic positions during the breeding season (3.7 and 3.9), but decreased these (2.9 and 3.3) during the feed-up for moult. Intra-specific differences were also detected in Thin-billed prions, where carbon isotope values clearly separated individuals with polar and temperate distributions, both in the breeding and interbreeding periods. Thin-billed prions that foraged in polar waters had lower trophic positions (3.2) than conspecifics foraging in temperate waters (3.8). We further investigated historical changes by comparing museum samples with samples collected recently. Our pilot study suggests that Rockhopper penguins, Magellanic penguins and Thin-billed prions with temperate non-breeding distributions had retained their trophic levels over a 90–100 year period, while Gentoo penguins and Thin-billed prions with polar non-breeding distributions had decreased trophic levels compared to historical samples. In contrast, Wilson’s storm-petrels had slightly increased trophic levels compared to samples taken in 1924–1930. We applied compound-specific stable isotope analyses across a range of contexts, from intra-specific comparisons between stages of the breeding cycle to inter-specific seabird community analysis that would not have been possible using bulk stable isotope analyses alone due to differences in isotopic baselines.