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41.
ABSTRACT: The complete nucleotide sequence of the mitochondrial genome for the Japanese anchovy Engraulis japonicus (Teleostei: Clupeiformes) was determined. The entire genome was purified by gene amplification using the long polymerase chain reaction (PCR) technique, and products were subsequently used as templates for PCR with 56 fish-versatile primers that amplify contiguous, overlapping segments of the entire genome. Direct sequencing of the PCR products demonstrated that the genome (16 675 base pairs [bp]) contained the same 37 mitochondrial genes (two ribosomal RNA, 22 transfer RNA and 13 protein-coding genes) as those found in other vertebrates, with the gene order being identical to that in typical vertebrates. A major non-coding region between the tRNAPro and tRNAPhe genes (1024 bp) was considered to be the control (D-loop) region, as it has several conservative blocks characteristic to this region. 相似文献
42.
Akira Inoue Kohei Takadono Ryuji Nishiyama Kenji Tajima Takanori Kobayashi Takao Ojima 《Marine drugs》2014,12(8):4693-4712
A major alginate lyase, FlAlyA, was purified from the periplasmic fraction of an alginate-assimilating bacterium, Flavobacterium sp. strain UMI-01. FlAlyA showed a single band of ~30 kDa on SDS-PAGE and exhibited the optimal temperature and pH at 55 °C and pH 7.7, respectively. Analyses for substrate preference and reaction products indicated that FlAlyA was an endolytic poly(mannuronate) lyase (EC 4.2.2.3). A gene fragment encoding the amino-acid sequence of 288 residues for FlAlyA was amplified by inverse PCR. The N-terminal region of 21 residues except for the initiation Met in the deduced sequence was predicted as the signal peptide and the following region of six residues was regarded as propeptide, while the C-terminal region of 260 residues was regarded as the polysaccharide-lyase-family-7-type catalytic domain. The entire coding region for FlAlyA was subjected to the pCold I—Escherichia coli BL21(DE3) expression system and ~eight times higher yield of recombinant FlAlyA (recFlAlyA) than that of native FlAlyA was achieved. The recFlAlyA recovered in the periplasmic fraction of E. coli had lost the signal peptide region along with the N-terminal 3 residues of propeptide region. This suggested that the signal peptide of FlAlyA could function in part in E. coli. 相似文献
43.
Amal K. Biswas Manabu Seoka Yuya Inoue Kenji Takii Hidemi Kumai 《Aquaculture (Amsterdam, Netherlands)》2005,250(3-4):666-673
Two consecutive trials were conducted to investigate the effects of photoperiod manipulation on growth rate, food intake and feed conversion efficiency (Trial 1), and the digestibility of nutrients and energy (Trial 2) in red sea bream, Pagrus major (body weight 19–120 g). Fish were exposed to four photoperiods (6L:6D, 12L:12D, 16L:8D and 24L:0D) with light intensity 1500 lx on the water surface. The fish were fed with a commercial diet to apparent satiation. In Trial 2, 0.5% chromic oxide (Cr2O3) was used as an inert marker. Significantly higher weight gain and specific growth rates were observed in fish exposed to a 24L:0D photoperiod followed by 16L:8D, 6L:6D and 12L:12D photoperiods (P < 0.05). Food intake and feed conversion efficiency (FCE) were also significantly higher in fish exposed to 24L:0D followed by 16L:8D, 6L:6D and 12L:12D photoperiods (P < 0.05). Fish exposed to 24L:0D and 16L:8D photoperiods showed significantly higher lipid and energy digestibility than those exposed to a 12L:12D photoperiod (P < 0.05). The results demonstrated that the enhancement of growth performances under 16L:8D and 24L:0D photoperiods were attributed to improved appetite, greater food intake and higher feed conversion efficiency as well as higher digestibility. 相似文献
44.
M. Rafiqul Islam M. Giashuddin Miah Yoshio Inoue 《Land Degradation \u0026amp; Development》2016,27(4):899-909
Coastal land use across the globe has experienced remarkable rapid change over the recent decades because of extraordinary anthropogenic pressure and climate variability and change. Therefore, quantitative information about coastal land use change is imperative for effective management and planning resources for sustainable development. We analysed the quantitative land use and land cover changes during 1989–2000–2010 periods in three important agroecological zones of the most vulnerable coastal region of Bangladesh using Landsat images (Thematic Mapper/Enhanced Thematic Mapper Plus). In the Ganges Tidal Floodplain, the area under shrimp cultivation greatly increased at the rate of 2·05% per annum. The majority of the shrimp area gained from conversion of single cropland. In the Meghna Estuarine Floodplain, decreased mudflat and water bodies were observed, which was predominantly converted into cropland. In Chittagong Coastal Plain, salt pan–shrimp area increased with the expense of single and/or double cropland. In all the study areas, settlement area considerably increased over time. The dynamics of land use change have been attributed to low and unstable food production in the coastal region. The approach adopted in study and the results obtained from the study would likely be useful for policy making and identifying direction for future studies on the coastal land use in Bangladesh. Copyright © 2015 John Wiley & Sons, Ltd. 相似文献
45.
Influence of Acid Deposition on Inland Water Chemistry - A Case Study from Hyogo Prefecture, Japan -
The Influence of acid deposition on stream and lake water chemistry was studied in a forested watershed of Hyogo prefecture, Japan. Monthly sampling of four streams, one artificial lake, and precipitation was carried out from 1995 to 2000. The pH of the monthly bulk precipitation and rainwater were ranged from 4.06 to 7.10. No trends were evident during the monitoring periods. The pH and alkalinity in the four streams, which flow into the artificial lake, ranged from 6.37 to 8.72 and 0.077 meqL?1 to 0.485 meqL?1, respectively. The differences in the water quality of the four streams were related to the geology of each watershed. Lower pH and alkalinity were observed during high- discharge periods. On the other hand, the pH and alkalinity of the outflow from the lake ranged from 6.47 to 7.36 and 0.195 meqL?1 to 0.339 meqL?1, respectively. No acidification of the aquatic environment was observed during the investigated periods. The results suggest that this forested ecosystem has the capacity to neutralize incoming acid deposition. 相似文献
46.
Continuous changes in methane (CH4) and carbon dioxide (CO2) concentrations inside a closed chamber were measured on the forest floor at three sites: a deciduous forest and a coniferous forest in Hokkaido, Japan, and a birch forest in West Siberia, Russian Federation. Flux estimations by three types of regression methods, exponential, nonlinear, and linear, were examined using field-collected concentration data. The pattern of change with time of the gas concentration in the headspace differed, mainly according to site but also, to a lesser extent, according to the gas. This was a function of both the chamber height and surface soil property relating to soil gas diffusion and the gas concentration profile. Flux estimations did not differ statistically between the exponential and nonlinear methods for either gas at any site, because both of those regression methods were based on diffusion theory. However, the flux values estimated by linear regression were significantly different from those estimated by the other two methods for both CH4 and CO2 at the deciduous forest site and for CO2 at the coniferous forest site. Shortening the chamber deployment period improved the linearity of the curve, but did not completely eliminate the error. Our results suggest that linear regression is not a good model of the change in headspace concentration with time. 相似文献
47.
Breakdown and macroinvertebrate colonization of conifer needles (Cryptomeria japonica) and deciduous broadleaves (Euptelea polyandra) were investigated using litter bags in two study sites in streams flowing through a conifer plantation of C. japonica in Shikoku, southwestern Japan (one site with conifer canopy and another with mixed conifer and broadleaved canopy). Breakdown
rates and macroinvertebrate densities were compared between litter species (conifer needle vs broadleaf) and between the two
sites (conifer vs mixed canopy) to determine (1) whether breakdown rate of broadleaves is higher than conifer needles, (2)
whether macroinvertebrates prefer broadleaves to conifer needles, and (3) whether the difference in riparian canopy is reflected
in macroinvertebrate abundance. The results indicated that breakdown rates of broadleaves were higher than those of conifer
needles, suggesting poorer quality of the latter as food for macroinvertebrates. Differences in macroinvertebrate density
between needles and broadleaves were generally consistent with those in breakdown rates: broadleaves tended to have higher
densities than needles, suggesting that conifer needles were not preferred by macroinvertebrates. However, total macroinvertebrate
density in the conifer site was not significantly different from that in the mixed site, although the dominant shredder taxon
differed (conifer site: gammarids; mixed site: lepidostomatids). Although conifer needles are low-quality food for macroinvertebrates,
this may offer some advantages. Conifer needles remain on the streambed for longer periods owing to their lower breakdown
rates, being a constantly available resource. In addition, accumulations of conifer litter may effectively trap and retain
particulate organic matter. 相似文献
48.
Yanagita T Wang YM Nagao K Ujino Y Inoue N 《Journal of agricultural and food chemistry》2005,53(24):9629-9633
We investigated the effect of dietary combination of conjugated linoleic acid (CLA) and docosahexaenoic acid (DHA) to attenuate CLA-induced fatty liver in C57BL/6N mice. Mice were fed semisynthetic diets that contained either 6% high linoleic safflower oil (HL-SAF), 4% HL-SAF + 2% CLA, or 3.5% HL-SAF + 2% CLA + 0.5% DHA for 4 weeks. This 4 week feeding of CLA showed hepatic lipid accumulation concomitant with the decrease in adipose tissue weight in mice. However, 0.5% supplementation of DHA to the CLA diet could alleviate fatty liver without decreasing the antiobesity effect of CLA. The CLA diet promoted fatty acid synthesis in the liver, but DHA supplementation significantly attenuated the increase in enzyme activity induced by CLA. On the other hand, serum adipocytokines, leptin and adiponectin, were drastically decreased by CLA feeding, and DHA supplementation did not affect those levels. These results show that DHA supplementation to the CLA diet can attenuate CLA-induced fatty liver through the reduction of hepatic fatty acid synthesis without affecting adipocytokine production in C57BL/6N mice. 相似文献
49.
对日本北海道西南部的两个不同土地利用方式流域的几场降雨中的悬移质输沙量进行了观测。一个流域完全被森林所覆盖 ,另一个流域农业用地占 35%。这个地区主要种植日耕型的高原作物 ,该作物系喂养菜牛的饲料。从 1 997年 5月到 1 998年 1 0月 (不包括 1 997年 1 1月至1 998年 4 相似文献
50.
Quahir Sohail Tomoe Inoue Hiroyuki Tanaka Amin Elsadig Eltayeb Yoshihiro Matsuoka Hisashi Tsujimoto 《Breeding Science》2011,61(4):347-357
Few genes are available to develop drought-tolerant bread wheat (Triticum aestivum L.) cultivars. One way to enhance bread wheat’s genetic diversity would be to take advantage of the diversity of wild species by creating synthetic hexaploid wheat (SW) with the genomic constitution of bread wheat. In this study, we compared the expression of traits encoded at different ploidy levels and evaluated the applicability of Aegilops tauschii drought-related traits using 33 Ae. tauschii accessions along with their corresponding SW lines under well-watered and drought conditions. We found wide variation in Ae. tauschii, and even wider variation in the SW lines. Some SW lines were more drought-tolerant than the standard cultivar Cham 6. Aegilops tauschii from some regions gave better performing SW lines. The traits of Ae. tauschii were not significantly correlated with their corresponding SW lines, indicating that the traits expressed in wild diploid relatives of wheat may not predict the traits that will be expressed in SW lines derived from them. We suggest that, regardless of the adaptability and performance of the Ae. tauschii under drought, production of SW could probably result in genotypes with enhanced trait expression due to gene interactions, and that the traits of the synthetic should be evaluated in hexaploid level. 相似文献