A novel source of resistance to the two-spotted spider mite in Lycopersicon pimpinellifolium (Jusl.) Mill.: its genetics as affected by interplot interference

We have previously found an accession of Lycopersicon pimpinellifolium (Jusl.) Mill. (`TO-937') that appeared to resist attack by the two-spotted spider mite (Tetranychus urticae Koch). L. pimpinellifolium is a very close relative of the cultivated tomato (Lycopersicon esculentum Mill.) and thereby a potential source of desirable traits that could be introgressed to the crop species. The objective of this study was to investigate the genetics of the resistance present in `TO-937'. Resistance to infestation by the spider mite was quantified in 24-plant plots of L. pimpinellifolium accessions `TO-937' and `PE-10', L. pennellii accession `PE-45', L. esculentum cultivars `Moneymaker', `Roma' and `Kalohi' (reported to be partially resistant: Stoner & Stringfellow, 1967), and the interspecific F₁ cross, L. esculentum `Moneymaker' × L. pimpinellifolium `TO-937'. Only `TO-937', the F<sub>1</sub>, and`PE-45' were found to be resistant. Resistance of `TO-937' was complete when evaluated in two small greenhouses completely planted with `TO-937' so as to simulate the genotypic homogeneity usual in commercial crops. Generations (P₁, P₂, F₁, F₂, BC₁P₁, and BC₁P₂) of a P₁ (susceptible) × P₂ (resistant) cross (`Moneymaker' × `TO-937') were studied for resistance in a single-plant per plot design. Resistance of `TO-937' was inherited with complete dominance and appeared to be controlled by either two or four genes according to whether segregation in the F₂ or the BC₁P₁, respectively, were considered. However, calculation of the number of genes involved in the resistance was complicated by negative interplot interference due to the high frequency of resistant genotypes within most of the generations. This revised version was published online in July 2006 with corrections to the Cover Date.     

Epistasis in an Andean × Mesoamerican cross of common bean

The objective of this investigation was to check if epistasis is present in Andean × Mesoamerican beans crosses using triple test cross (TTC) method. The parents of the segregating population were Carioca–MG (Mesoamerican) and BRS Radiante (Andean). In July 2005, F₂ progenies (backcrossed with the parents and F₁ generation) were evaluated at two locations for three characters: number of pods plant⁻¹, number of grains plant⁻¹ and grain weight plant⁻¹. The presence of epistasis was detected for all yield components. In the partitioning of epistasis in additive x additive (i) and dominant x dominant (j) and dominant × additive (l) it was observed that, for the traits number of pods/plant and number of grains/plant, only epistasis of the type (j) + (l) were significant. For the trait grain mass/plant, all types of epistasis were significant.     

Development and variability analysis of microsatellite markers in peach

A genomic DNA library enriched with AG/CT repeats has been developed from the peach cultivar ‘Merrill O'Henry’. The enrichment method was efficient, with 61% of the clones obtained carrying a microsatellite sequence and a yield of one polymorphic microsatellite every 2.17 sequenced clones. From 35 microsatellites detected, 24 were polymorphic in a set of 25 cultivars including 14 peaches and 11 nectarines. A total of 82 alleles were found with the polymorphic microsatellites, with an average of a 37% of observed heterozygosity. Microsatellites with a high number of repeats were generally those having the largest number of alleles. All cultivars except two (‘Spring Lady’ and ‘Queencrest’) could be individually distinguished with the markers used. Just three selected microsatellites were enough for the discrimination of 24 out of the 25 possible genotypes. Cluster analysis grouped all nectarines in a single cluster. Peaches, with 75 of the 82 alleles found, were more variable than nectarines, with only 64. Microsatellites appear to be powerful and suitable markers for application in peach genetics and breeding.     

Genetic instability of bermudagrass (Cynodon) cultivars 'Tifgreen' and 'Tifdwarf' detected by DAF and ASAP analysis of accessions and off-types

DNA amplification fingerprinting (DAF) and arbitrary signatures from amplification profiles (ASAP) were used to evaluate the genetic stability of two important bermudagrass (Cynodon) cultivars, the interspecific cross Tifgreen and its somatic mutant Tifdwarf, and study genetic diversity and origin of derived bermudagrass off-types that exhibit patches of contrasting morphology and performance. Mini-hairpin primers produced complex and reproducible DAF and ASAP profiles with high levels of polymorphic DNA, and established genetic relationships between 11 Tifgreen and 8 Tifdwarf turf plot accessions and 16 off-types. DAF analysis revealed an average 14.1 ± 5.6 (SE) polymorphic bands/primer within cultivar accessions. In contrast, the higher resolving power of ASAP detected 24.5 ± 2.1 polymorphic bands/primer. Similarly, DAF and ASAP produced 13.0 ± 5.5 (SE) and 20 ± 2.8 polymorphic bands/primer within off-types, respectively. Phenetic analysis using cluster (UPGMA) and ordination (PCO) techniques showed that both Tifdwarf and Tifgreen were genetically unstable. The analysis showed that almost all cultivar accessions and one-half of the off-types studied were genetically distinct, but very close to each other. In this case, genetic variation was probably the result of somatic mutations. The other off-types and some Tifgreen accessions represented a genetically distant and diverse bermudagrass group of interspecific hybrid (n=27) origin. Off-types were probably the result of sod contamination. Results complement a previous study that established that the interspecific Tifway bermudagrass was genetically stable whereas derived off-types were contaminants rather than somatic mutants. Tifgreen and Tifdwarf showed genetic instabilities that were readily detected by DNA amplification with mini-hairpin primers. The present study offers a direct molecular alternative capable of evaluating the genetic stability of selected cultivars. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic and statistical models for estimating genetic parameters of maize seedling resistance to Fusarium graminearum Schwabe root rot

Root lodging is an important problem in corn fields. Fungi recovered from roots include seedling blight and stalk rot pathogens. The objective of this work was to study the inheritance of maize seedling resistance to pathogens causing maize lodging. The Fusarium graminearum strain, 241 Fr1, was isolated from maize lodged plants and identified as the most pathogenic isolate for root rotting. Nine inbred lines of maize and their diallel F₁ crosses plus control genotypes were studied. Seedlings were inoculated at the stage of four-leaves. Disease severity was measured as percentage of the root rotted area. Highly significant differences between inoculated and non-inoculated genotypes were found. Four genetic models and two statistical approaches—the mixed model for the best linear unbiased prediction (BLUP) and the general linear model (GLM)—were used for the analysis. Favorable heterosis of resistance of hybrids over inbreds was the most important effect detected. The general combining ability (GCA) effects were significant for all genetic models and statistical methods studied, and a good agreement existed among the GCA estimates by the different methods. The type of gene action, either additive or dominance, showed a large variation among the parental inbreds and hybrids. Selection of additive effects based exclusively on inbred lines is not sufficient to confer resistance to hybrids, additional selection should be practiced on hybrids to look for favorable dominance effects. This revised version was published online in July 2006 with corrections to the Cover Date.     

Heritability and correlations among traits in four-way soybean crosses

Recurrent selection programs can use several crossing arrangements to synthesize basic populations for breeding purposes. This study evaluated heritability and correlations among traits in forty-five populations of F_2[4] and F_2:3[4] generations obtained throughout four-way crosses [4] between two dialells among ten semi-late and ten late maturity soybean (Glycine max L. Merrill) genotypes. The generation advance was made by the TSHD (Thinned Single Hill Descent) method and all individual plants were evaluated for the following traits: number of days to flowering (NDF) and maturity (NDM), plant height at flowering (PHF) and maturity (PHM), agronomic value (AV) and seed yield (YLD). Four-way crosses associated with TSHD method provided high genetic variability in the populations with little or no reduction from F_2[4] to F_2:3[4]. The ‘narrow sense’ heritability estimated using correlations between F_2[4] and F_2:3[4] plants was lower than but closely related to broad-sense estimates. The populations 21(IAC-4 × IAC-9) × (GO79-1039 × Paranagoiana) and 23 (IAC-4 × Santa Rosa) × (GO79-1039 × Tropical) were the most productive with high variability in F_2[4] and/or F_2:3[4] generations. Genotypic correlations measured were generally high, positive and consistent for the two generations except for those related to AV and YLD. These results indicate that the use of four-way crosses can be an efficient method to increase the genetic base of populations for recurrent selection or cultivar development. Significant AV × YLD correlations indicated visual selection can be used as additional selection criteria for improving populations. This revised version was published online in August 2006 with corrections to the Cover Date.     

New self-incompatibility alleles in apricot (Prunus armeniaca L.) revealed by stylar ribonuclease assay and S-PCR analysis

Apricot (Prunus armeniaca L.) shows gametophytic self-incompatibility controlled by a single locus with several allelic variants. An allele for self-compatibility (S_C) and seven alleles for self-incompatibility (S₁–S₇) were described previously. Our experiments were carried out to ascertain whether the number of allelic variants of apricot S-locus was indeed so small. Twenty-seven apricot accessions were analysed for stylar ribonucleases by non-equilibrium pH gradient electrofocusing (NEpHGE) to determine their S-genotype. To validate the results of electrofocusing, the applicability of the S-gene-specific consensus PCR primers designed from sweet cherry sequences was tested. NEpHGE revealed 12 bands associated with distinct S-alleles in newly genotyped cultivars. Cherry consensus primers amplified 11 alleles out from 16 ones, which indicated that these primers could also recognize most of the S-RNase sequences in apricot, and provided an efficient tool to confirm or reject NEpHGE results. By combining the protein and DNA-based methods, complete or partial S-genotyping was achieved for 23 apricot accessions and nine putatively new alleles (provisionally labelled S₈–S₁₆) were found. Their identity needs to be confirmed by pollination tests or S-allele sequencing. This study provides evidence that similarly to other Prunus species, the S-locus of apricot is more variable than previously believed.     

Morphological characterization of kale populations from northwestern Spain

Crops belonging to the genus Brassicaare widely grown in Galicia (northwesternSpain). Kales (Brassica oleracea L.convar. acephala (DC.) Alef.) are oneof the most important Brassica cropsin this region where landraces aretraditionally grown by farmers on smallplots for either human or animal food.Fifteen kale populations from northwesternSpain were evaluated in two locations andtwo planting dates (early and late). Theobjectives were i) to study theirmorphological diversity, ii) to determinetheir relationships, and iii) to evaluatetheir morphological and agronomiccharacteristics that could be incorporatedto breeding programs in the future.Significant differences were found amongpopulations for all traits while genotype ×environment interaction was not significantfor most of them. Cluster and principalcomponent analysis were performed todetermine relationships among landraces andto obtain information on the usefulness ofthe characters for the definition ofgroups. The phenogram showed five groups,two groups including most of thepopulations and three small independentgroups. Groups of landraces were associatedwith the geographical origin and withmorphological differences amongpopulations, mainly with the length oftheir vegetative phase: north and earlypopulations (cluster A) and south and latepopulations (cluster B). Morphologicaldiversity was higher in coastal populationsthan in inland populations. As conclusion,the populations evaluated in this workdisplay a wide diversity of traits whichenable us to select and combine someinteresting landraces for important traitsin order to obtain improved varieties.     

Morphological and molecular characterization of melon accessions resistant to Fusarium wilts

Fusarium wilt incited by Fusarium oxysporum f. sp. melonis (F.o.m) is one of the most widespread and devastating melon diseases. While resistance to physiological races 0, 1, and 2 is relatively frequent in different botanical varieties, sources of resistance to race 1,2 are restricted to a few Far-Eastern accessions. In this work, the results of a screening for resistance to F.o.m. race 1,2 among 32 accessions are presented. Three Japanese accessions (‘Kogane Nashi Makuwa’, ‘C-211’, and ‘C-40’) showed the highest resistance levels, but useful levels of resistance were also detected in one Russian ‘C-160’ and two Spanish (‘C-300’ and ‘Mollerusa-7’) accessions. These resistant materials, together with other accessions previously described as resistant to F.o.m. races 0, 1, and/or 2 have been morphologically and molecularly characterized. Based on cluster analysis, these accessions have been grouped according to the botanical subspecies they belong to. Assessment of genetic diversity indicated that the resistant accessions to races 0, 1 and 2, are scattered along the established clusters. On the other hand, high levels of resistance to the race 1,2 could be found only among accessions belonging to Cucumis melo subsp. agrestis, nevertheless, a certain degree of resistance to this race could also be found within some accessions belonging to subsp. melo. As far as we know, this is the first report of resistance to F.o.m race 1,2 found out from the Far-Eastern melon material. Based on fruits characteristics, it appears that several inodurus and cantalupensis accessions could be exploited in breeding programs as resistance sources to F.o.m races 0, 1 and/or 2 for the improvement of these melon types. The accessions with the highest levels of resistance to the race 1,2 appeared to be very distant both molecularly and morphologically from the commercial types. Nevertheless ‘C-160’, ‘C-300’, and ‘Mollerusa-7’ classified as var. inodorus are morphologically very similar to the Spanish commercial types and might be used as resistant sources in breeding these melon types.