Construction of a genetic linkage map with SSR,AFLP and morphological markers to locate QTLs controlling pathotype-specific powdery mildew resistance in diploid roses

Disease resistance is a sought-after trait in plant breeding programmes. One strategy to make resistance more durable is to increase the number of resistance genes, thereby increasing the number of pathotypes withstood. One of the most important diseases on roses is powdery mildew (PM) (Podosphaera pannosa). Recent studies show that pathotypes of PM and different types of resistances in roses exist. The results of this study aim to contribute to PM resistance in roses by the development of pathotype-specific markers on a genetic map. A diploid rose population (90 genotypes) derived from a cross between Rosa wichurana and Rosa ‘Yesterday’ was used to construct a genetic linkage map encompassing 20 AFLP primer combinations, 43 SSR, and 2 morphological markers. By applying the F1 pseudo test cross population strategy, two parental linkage maps were constructed (parent ‘Yesterday’ 536 cM; parent R. wichurana 526 cM). Both parental maps consisted of seven linkage groups with an average length of 70 cM (Kosambi) corresponding to the seven haploid rose chromosomes. These new maps were used to identify QTLs controlling disease resistance. The offspring population was screened for resistance to two PM pathotypes, R–E and R–P. QTLs for controlling pathotype-specific disease resistance were mapped by applying Kruskal–Wallis rank-sum tests and simple interval mapping. With two pathotypes analysed, nine QTL loci were detected on linkage groups 2, 3, 5 and 6, explaining 15–73% of the phenotypic variance for pathotype-specific disease response. The genetic maps developed here will be useful for future rose breeding, pathotype-specific resistance research and development of a consensus map for roses.     

Modeling hydrogen peroxide bleaching to predict optical properties of bleached hardwood CMP

Due to the variations in opacity and brightness of peroxide bleached pulp at Mazandaran Wood and Paper Industries Company (MWPI), empirical models were developed to predict chemimechanical pulp (CMP) brightness and opacity from peroxide bleaching conditions and to drive the optimum operating conditions. To overcome the inconsistency problem, a multi-variate regression analysis method was used for model building. The models were then validated using a new data set from the bleach plant at MWPI, assessing the models’ predictive ability and performance. The results show that there is a relationship between bleaching variables and such dependent variables as pulp brightness and opacity. In addition to the hydrogen peroxide charge and pulp initial brightness, the initial opacity had a significant reverse effect on the final CMP brightness. It was also found that the concentration of total Na⁺ in the CMP tower was the most important variable affecting the final pulp opacity. The validation results demonstrated that these models can be employed as useful tools for process optimization purposes.     

A Historic Review of the Role of CD4+ T-Cell Subsets in Development of the Immune Responses against Cutaneous and Visceral Leishmaniases

The heterogeneity of CD4⁺ T cells has been investigated since the late 1970s, when their Th1 and Th2 subsets were coined. Later studies on the cutaneous form of the Leishmaniasis were focused on the experimental models of Leishmania major infection using the susceptible BALB/c and the resistant C57BL/6 mice. At the early 21^st century, the T_reg subpopulation was introduced and its role in concomitant immunity, responsible for lifelong resistance of the host to the reinfection was proposed. Subsequent studies, mainly focused on the visceral form of the infection pointed to the role of IL-17, produced by Th17 subset of CD4⁺ T cells that along the neutrophils were shown to have important yet equivocal functions in protection against or exacerbation of the infection. Altogether, the current knowledge indicates that the above four subsets could orchestrate the immune, the regulatory and the inflammatory responses of the host against different forms of leishmaniases. Key Words: Immunity, Leishmaniasis, T-Lymphocytes     

Effect of Cattle Manure and Sulfur on Yield and Oil Composition of Pumpkin (Cucurbita pepo var. Styriaca) Inoculated with Thiobacillus thiooxidans in Calcareous Soil

The effect of cattle manure and sulfur fertilizer on seed yield and oil composition of pumpkin (Cucurbita pepo var. Styriaca) under inoculated with Thiobacillus thiooxidans was investigated in a factorial study based on a randomized complete block design. Experimental factors consisted of cattle manure (M) (M₀: 0, M₁: 10; and M₂: 20 t ha^?1), sulfur (S) (S₀: 0, S₁: 250; and S₂: 500 kg ha^?1) and T. thiooxidans (B): inoculated (B₁) and non-inoculated (B₀). Results demonstrated that the application of T. thiooxidans, cattle manure, and S fertilizer decreased the soil pH. The largest number of seed per fruit (367), highest fruit yield (70.57 t ha^?1), seed iron (Fe) content (16.26 mg 100 g^?1), and seed yield (111 kg ha^?1) was obtained when 20 t ha^?1 manure was applied in combination with 500 kg ha^?1 S inoculated with T. thiooxidans. In this condition, the content of S, Fe, phosphorus (P), and nitrogen (N) in plant shoots was increased by 44.8%, 22.58%, 33.89%, and 10.38%, respectively, compared to the control. Moreover, the highest content of seed protein was observed in 10 t ha^?1 manure and 500 kg ha^?1 S fertilizer inoculated with T. thiooxidans. When 250 kg ha^?1 S fertilizer was applied, 20 t ha^?1 manure decreased seed P content sharply. At the rate of 500 kg ha^?1 S fertilizer, the highest content of seed P was obtained from 20 t ha^?1 manure. Totally, 20 t ha^?1 cattle manure, along with 500 kg ha^?1 S fertilizer as well as T. thiooxidans inoculation, improved oil and seed yield of medicinal pumpkin.     

Participatory rural appraisal to identify needs and prospects of market-oriented dairy industries in Bangladesh

We assessed resources, challenges and prospects of the dairy industries in four districts of Bangladesh (Mymensingh, Satkhira, Chittagong and Sirajganj) with the participation of 8 to 12 dairy farm families in each district. We used ten participatory rural appraisal (PRA) tools, namely social mapping, semi-structured interview, activity profiles, seasonal calendar, pie charts, mobility diagram, matrix ranking, preference ranking and scoring, system analysis diagram and focus group discussion in 57 PRA sessions from September through October 2002. Dairying contributed more to family income (63 to 74%) and utilized a smaller portion of land than did crops. Twenty seven to 49% of cattle feed is rice straw. Only Sirajganj and Chittagong had limited, periodic grazing facilities. Fodder (Napier; Pennisetum purpureum) cultivation was practiced in Sirajganj and Satkhira. Fodder availability increased milk production and decreased disease occurrence. Friesian crossbred cows were ranked best as dairy cattle. The present utilization of veterinary and AI services was ranked highly. Farmers outside the milk union desired milk purchasing centres as the most required service in the future. They identified veterinary and AI services as inadequate and desired significant improvements. The PRA tools effectively identified resources, constraints, opportunities and farmers’ perspectives related to the dairy industries in Bangladesh.     

Effects of nanoclay on physical and mechanical properties of wood-plastic composites

Effects of nanoclay (NC) on physical and mechanical properties of wood-plastic composite (WPC) were studied here. Virgin, recycled, and mixed (50/50% of virgin/recycled) polyvinyl chloride (PVC) were used as the matrix in the WPC. Specimens with three NC contents of 1.5%, 3%, and 5% were manufactured; they were then compared with control specimens. Totally, 12 treatments were manufactured. The physical and mechanical properties were measured in accordance with the ASTM standards. The highest properties were found in specimens made from virgin PVC. Addition of recycled PVC resulted in significant decrease in all properties. NC improved all physical and mechanical properties studied in the present research project; the highest properties were observed in specimens with 5% of NC content. The improvement in properties was as a result of formation of bonds between the hydroxyl groups of NC with the wood flour components. It was concluded that NC would significantly improve the properties in all the three PVC types of virgin, recycled, and mixed. From an industrial point of view, it was concluded that mixing virgin and recycled PVC can be recommended not only to decrease production costs, but also to partially solve the problem of PVC residue which are not bio-degradable.     

Radiosensitivity and repair kinetics of gamma-irradiated leukocytes from sporadic prostate cancer patients and healthy individuals assessed by alkaline comet assay

Background: Impaired DNA repair mechanism is one of the main causes of tumor genesis. Study of intrinsic radiosensitivity of cancer patients in a non-target tissue (e.g. peripheral blood) might show the extent of DNA repair deficiency of cells in affected individuals and might be used a predictor of cancer predisposition. Methods: Initial radiation-induced DNA damage (ratio of Tail DNA/Head DNA), dose-response curves and kinetics of DNA repair in leukocytes from healthy volunteers and prostate cancer patients were assessed using alkaline comet assay after exposure to ⁶⁰Co gamma rays. Results: Results showed that higher levels of baseline and gamma rays induced DNA damage in leukocytes of prostate cancer cases than in controls. A similar dose response was obtained for both groups. After a repair time of 24 h following in vitro irradiation, samples from the healthy individuals showed no residual DNA damage in their leukocytes, whereas prostate cancer patients revealed more than 20%. Although similar initial radiosensitivity was observed for both groups, the repair kinetics of radiation induced DNA damage of leukocytes from prostate cancer cases and healthy subjects were statistically different. Conclusion: These results support the hypothesis that men affected by prostate cancer may have a constitutional genomic instability. Key Words: Leukocytes, DNA damage, Radiosensitivity, Prostate cancer, Comet assay     

The application of polyamines by pressure or immersion as a tool to maintain functional properties in stored pomegranate arils

Pomegranate fruits were treated with putrescine (Put) or spermidine (Spd) at 1 mM either by pressure infiltration or by immersion and then were stored at 2 degrees C for 60 days. Samples were taken biweekly and were further stored 3 days at 20 degrees C for shelf life study. The treatments were effective on maintaining the concentration of ascorbic acid, total phenolic compounds, and total anthocyanins in arils at higher levels than in control samples. In addition, the two ways of polyamine application increased the levels of total antioxidant activity (TAA) during storage, especially when polyamines were applied by pressure infiltration. Moreover, Spd showed the best results on increasing TAA through maintenance of total phenolic compounds.     

Variation of tolerance to manganese toxicity in Australian hexaploid wheat

High concentrations of manganese (Mn), iron (Fe), and aluminium (Al) induced in waterlogged acid soils are a potential constraint for growing sensitive wheat cultivars in waterlogged‐prone areas of Western Australian wheat‐belt. Tackling induced ion toxicities by a genetic approach requires a good understanding of the existing variability in ion toxicity tolerance of the current wheat germplasm. A bioassay for tolerance to high concentration of Mn in wheat was developed using Norquay (Mn‐tolerant), Columbus (Mn‐intolerant), and Cascades (moderately tolerant) as control genotypes and a range of MnCl₂ concentrations (2, 250, 500, 750, 1000, 2000, and 3000 μM Mn) at pH 4.8 in a nutrient solution. Increasing solution Mn concentration decreased shoot and root dry weight and intensified the development of toxicity symptoms more in the Mn‐intolerant cv. Columbus than in Norquay and Cascades. The genotypic discrimination based on relative shoot (54% to 79%) and root dry weight (17% to 76%), the development of toxicity symptoms (scores 2 to 4) and the shoot Mn concentration (1428 to 2960 mg kg^–1) was most pronounced at 750 μM Mn. Using this concentration to screen 60 Australian and 6 wheat genotypes from other sources, a wide variation in relative root dry weight (11% to 95%), relative shoot dry weight (31% to 91%), toxicity symptoms (1.5 to 4.5), and shoot Mn concentration (901 to 2695 mg kg^–1) were observed. Evidence suggests that Mn tolerance has been introduced into Australian wheat through CIMMYT germplasm having “LERMO‐ROJO” within their parentage, preserved either through a co‐tolerance to Mn deficiency or a process of passive selection for Mn tolerance. Cultivars Westonia and Krichauff expressed a high level of tolerance to both Mn toxicity and deficiency, whereas Trident and Janz (reputed to be tolerant to Mn deficiency) were intolerant to Mn toxicity, suggesting that tolerance to excess and shortage of Mn are different, but not mutually exclusive traits. The co‐tolerance for Mn and Al in ET8 (an Al‐tolerant near‐isogenic line) and the absence of Mn tolerance in BH1146 (an Al‐tolerant genotype from Brazil) limits the effectiveness of these indicator genotypes to environments where only one constraint is induced. Wide variation of Mn tolerance in Australian wheat cultivars will enable breeding genotypes for the genetic solution to the Mn toxicity problem.