Changes in inorganic and organic solutes in citrus growing under saline stresses

Salinity is a key factor limiting cirrus production in many world areas. The two citrus genotypes sour orange (Citrus aurantium L) and macrophylla (Citrus macrophylla Wester), that differ in their ability to restrict sodium (Na) and chloride (Cl) transport to the shoot under salt stress, were studied to compare the contribution of both inorganic and organic solutes in osmotic adjustment. Plants of both citrus genotypes were grown in isosmotic (0.23 MPa) solutions of different ionic composition (Na, NaCl, Cl, and concentrated macronutrients), and leaf and root solutes were measured to determine their relative contribution to osmotic adjustment. Both leaf water and osmotic potentials decreased in response to imposed stress in the nutrient media, regardless of the isosmotic treatment. Growth reduction was more severe in macrophylla than in sour orange, except for macronutrient treatment. The major components associated with the osmotic adjustment were inorganic solutes (ranging from 65 to 85% of total solutes) and organic solutes (ranging from 15 to 35%, depending on the genotype and the isosmotic treatment). Among these, carbohydrates were the major organic components (6–24%), with glucose the main osmoregulating sugar in Cl‐containing treatments. The contribution of the organic acids and amino acids to the osmotic adjustment of plant under saline stress seemed to be less important in these citrus species.     

Genetic and physiological analysis of tolerance to acute iron toxicity in rice

Background

Fe toxicity occurs in lowland rice production due to excess ferrous iron (Fe²⁺) formation in reduced soils. To contribute to the breeding for tolerance to Fe toxicity in rice, we determined quantitative trait loci (QTL) by screening two different bi-parental mapping populations under iron pulse stresses (1,000 mg L⁻¹ = 17.9 mM Fe²⁺ for 5 days) in hydroponic solution, followed by experiments with selected lines to determine whether QTLs were associated with iron exclusion (i.e. root based mechanisms), or iron inclusion (i.e. shoot-based mechanisms).

Results

In an IR29/Pokkali F₈ recombinant inbred population, 7 QTLs were detected for leaf bronzing score on chromosome 1, 2, 4, 7 and 12, respectively, individually explaining 9.2-18.7% of the phenotypic variation. Two tolerant recombinant inbred lines carrying putative QTLs were selected for further experiments. Based on Fe uptake into the shoot, the dominant tolerance mechanism of the tolerant line FL510 was determined to be exclusion with its root architecture being conducive to air transport and thus the ability to oxidize Fe²⁺ in rhizosphere. In line FL483, the iron tolerance was related mainly to shoot-based mechanisms (tolerant inclusion mechanism). In a Nipponbare/Kasalath/Nipponbare backcross inbred population, 3 QTLs were mapped on chromosomes 1, 3 and 8, respectively. These QTLs explained 11.6-18.6% of the total phenotypic variation. The effect of QTLs on chromosome 1 and 3 were confirmed by using chromosome segment substitution lines (SL), carrying Kasalath introgressions in the genetic background on Nipponbare. The Fe uptake in shoots of substitution lines suggests that the effect of the QTL on chromosome 1 was associated with shoot tolerance while the QTL on chromosome 3 was associated with iron exclusion.

Conclusion

Tolerance of certain genotypes were classified into shoot- and root- based mechanisms. Comparing our findings with previously reported QTLs for iron toxicity tolerance, we identified co-localization for some QTLs in both pluse and chronic stresses, especially on chromosome 1.     

Development and use of a two-gene marker-aided selection system for fertility restorer genes in rice

We have established marker-aided selection strategies for the two major Rf genes (Rf3 and Rf4) governing fertility restoration of␣cytoplasmic-genetic male sterility (CMS) in rice. Polymorphisms between restorer and non-restorer␣lines were observed using RG140/PvuII for Rf3 located on chromosome 1 and S10019/BstUI for Rf4 located on chromosome 10. DNA polymorphisms associated with these two loci in restorer lines of wild abortive (WA), Dissi, and Gambiaca cytoplasm are conserved, suggesting that similar biological processes control pollen fertility in this diverse cytoplasm. Because of their close linkage to Rf genes and distinct banding patterns, STS markers RG140/PvuII and S10019/BstUI are well suited for marker-aided selection, enhanced backcross procedures, and pyramiding of Rf genes in agronomically superior non-restorer lines. The combined use of markers associated with these two loci improved the efficiency of screening for putative restorer lines from a set of elite lines. Positional analyses of Rf4 and the inheritance pattern of the polymorphism in S10019/BstUI suggest that Rf4, governing fertility restoration in WA-CMS in rice, is likely to be the same gene governing fertility restoration in BT- and HL-CMS that has a gametophytic effect, which explains why 100% pollen fertility in hybrids is impossible to attain.     

Evaluation of visible implant elastomer tags for tagging juvenile gilthead seabream (Sparus auratus L.); effects on growth, mortality, handling time and tag loss

The use of the fluorescent visible implant elastomer (VIE) tagging system in juvenile gilthead seabream, Sparus auratus L., between 7 and 18 g was examined. Four different colours (red, green, orange and yellow), three body positions (dorsal, lateral and caudal) and two orientations (horizontal and vertical) were tested. The mean tag application time for each fish was 15.7±0.32 s. There was no mortality associated with the method of tagging. The most visible tag colour was red. Injection orientation had a significant effect on length, width, fragmentation and fluorescent intensity of the tag. Horizontal tagging is recommended because of high fluorescent intensity, low fragmentation and for double tagging. There were no differences in growth between untagged controls and the VIE‐tagged fish.     

Consistency of stress response to repeated handling in the gilthead sea bream Sparus aurata Linnaeus, 1758

Gilthead sea bream Sparus aurata Linnaeus, 1758 were subjected to repeated stresses, namely confinement and handling once a month for 5 consecutive months. Plasma cortisol concentration was determined as a primary stress response, and plasma glucose and osmolality, serum agglutination and growth rate were analysed as indicators of the secondary and tertiary effects of stress. The results of the mean values after the five trials showed that most indicators followed a consistent pattern with time. Cortisol and growth rate were positively correlated, and cortisol and osmolality were negatively correlated after stress. Analysis of the individual responses throughout all 5 months showed that 6–20% of the fish displayed a consistently high or low response depending on the parameter analysed.     

Lighting systems evaluation for indoor living walls

Living walls (LW) are vertical greening systems that are becoming popular due to their multiple social and environmental benefits. When LW are installed indoors, a lightening system is often required to ensure an appropriate plant development. This work assesses the performance of three artificial lighting systems on six indoor LW [0.7 m (wide) × 0.7 m (high)] placed at two distances from the light source. The plant species selected for the tests were Soleirolia soleirolii and Spathiphyllum wallisii, which are frequently used in indoor LW. Three different lamps were used in the experiment: incandescent (IL), fluorescent (FL) and metal halide (MHL) lamps, all of them with an input electric power of ≈250 W. Differences in plant growth were only observed when the LW were close to the light source (about 1 m) but not at greater distances (≈1.5 m). IL had the poorest performance. Despite the lower photosynthetic photon flux density efficiency of FL compared with MHL, FL light enabled plants placed in the upper LW (closer to light source) reached similar size to those grown under MHL. Plant quality attributes were generally not affected by light type or the distance to light source. IL and FL generated higher total water losses (i.e. transpiration plus evaporation) than MHL on a LW basis. When expressed per unit of LW area covered by vegetation, FL and MHL reduced water consumption by 34% and 56%, respectively, as compared to IL. Overall, our results indicate that both FL and MHL outperform IL and have a similar ornamental performance, whereas MHL are more advantageous than FL in terms of water consumption and annual cost.     

Identification of Ensifer strains isolated from root nodules of Medicago hispida grown in association with Zea mays in the Quechua region of the Peruvian Andes

Peasants of the Quechua region of the Peruvian Andes use chacras to grow maize (Zea mays) in innate association with bur clover (Medicago hispida). From a total of 25 bacterial strains isolated from root nodules of bur clover grown in soils from chacras in Allpas (Acobamba, Peru) 7 clustered into 6 Repetitive extragenic palindromic-polymerase chain reactions (REP–PCR) groups. The nearly complete 16S rRNA gene sequence from the representative strains AP1, AP15, AP28, AP29, AP37, and AP70 showed they were closely related to members of the genus Ensifer of the Alphaproteobacteria. Sequencing of the housekeeping atpD, glnII, and recA and the symbiotic nodC genes from each of the six strains revealed they all were similar to those of strains included in Ensifer medicae. The remaining 18 strains were distributed into 8 REP–PCR groups and analyses of the 16S rRNA gene sequences showed that the isolates belong to several phylogenetic groups, being closely related to species of genera Kaistia, Pseudomonas, Achromobacter, Stenotrophomonas, Xanthomonas, Sphyngopyxis, Duganella, and Rheinheimera.     

Diversity of common bean (Phaseolus vulgaris L.) germplasm from Portugal

Common bean (Phaseolus vulgarisL.) is a traditional crop in Portugal, where farmers growvarieties selected and maintained by themselves. A collection of 88landraces of common bean was evaluated for 17 quantitative andqualitative traits and the biochemical marker phaseolin to displaythe degree of variation of this germplasm. Agronomic data weresubjected to cluster analysis and several groups were identified,with three groups clustering most of the landraces. Regardingphaseolin variation the C and T banding patterns are the mostfrequent ones, so the origin of the Portuguese beans is thus probablythe Andean region of South America. These results give informationabout the origin, diversity and breeding value of the Portuguesegermplasm, that could be useful to widen the genetic base ofcurrently cultivated bean varieties in Europe.     

Comparison of iron bioavailability from 15 rice genotypes: studies using an in vitro digestion/caco-2 cell culture model

An in vitro digestion/Caco-2 model was used to compare iron bioavailability from 15 selected Fe-dense and normal genotypes of unpolished rice from the International Rice Research Institute. Iron uptake was determined using Caco-2 cell ferritin formation in response to exposure to a digest of the cooked rice. Iron bioavailabilities from all rice genotypes were ranked as a percent relative to a control variety (Nishiki). Iron concentration in the rice samples ranged from 14 to 39 microg/g. No correlation was observed between Fe uptake and grain-Fe concentration. Furthermore, phytic acid levels were not correlated with Fe bioavailability. Genotypes with low Fe bioavailability (Tong Lan Mo Mi, Zuchein, Heibao, and Xua Bue Nuo) were noticeably more brown to purple in color. The results suggest that certain unknown compounds related to rice grain color may be a major factor limiting Fe bioavailability from unpolished rice.