Landscape composition is the major driver of the taxonomic and functional diversity of tropical frugivorous birds

Landscape Ecology - Anthropogenic land use and cover changes impact biodiversity worldwide. However, ecological groups are differently affected by landscape composition and configuration....     

First molecular detection of canine herpesvirus 1 (CaHV-1) in the Eastern Brazilian Amazon

BackgroundCanine herpesvirus type 1 (CaHV-1) infects dogs and is associated with neonatal deaths and reproductive, ocular, neurological, and respiratory problems. In Brazil, reports of CaHV-1 have been restricted to the southeast and south regions, particularly in municipalities in the state of Rio Grande do Sul.ObjectivesTo assess the presence and variability of CaHV-1 in canine populations in the state of Pará, North Brazil.MethodsBiological samples from 159 dogs from 4 municipalities in the State of Pará were evaluated using polymerase chain reaction and phylogenetic analyses, with the target being the viral enzyme, thymidine kinase.ResultsCaHV-1 was detected in 13 dogs (8.2%), with 2 animals being from the municipality of Santa Bárbara do Pará, 8 from Algodoal Island, 2 from Salinópolis, and one from Capanema. The study sequences revealed 100% identity among themselves and 64% to 100% identity with the other nucleotide sequences from Australia, Brazil, United Kingdom, and United States, including 100% identity with the 2002 isolate from Australia. The 1996 isolate from France was grouped in a branch that was different from the sequence of this study.ConclusionsThis study presents the first molecular detection of CaHV-1 in dogs from the Amazon region in northern Brazil. The nucleotide identity between the strains and cytosine insertion in the sequences isolated in this study suggests at least 2 strains of CaHV-1 circulating in Brazil (Pará and BTU-1).     

Influence of land use (savanna,pasture, Eucalyptus plantations) on soil carbon and nitrogen stocks in Brazil

In Brazil, most Eucalyptus stands have been planted on Cerrado (shrubby savanna) or on Cerrado converted into pasture. Case studies are needed to assess the effect of such land use changes on soil fertility and C sequestration. In this study, the influence of Cerrado land development (pasture and Eucalyptus plantations) on soil organic carbon (SOC) and nitrogen (SON) stocks were quantified in southern Brazil. Two contrasted silvicultural practices were also compared: 60 years of short‐rotation silviculture (EUC_SR) versus 60 years of continuous growth (EUC_HF). C and N soil concentrations and bulk densities were measured and modelled for each vegetation type, and SOC and SON stocks were calculated down to a depth of 1 m by a continuous function. Changes in SOC and SON stocks mainly occurred in the forest floor (no litter in pasture and up to 0.87 kg C m^?2 and 0.01 kg N m^?2 in EUC_SR) and upper soil horizons. C and N stocks and their confidence intervals were greatly influenced by the methodology used to compute these layers. C/N ratio and ¹³C analysis showed that down to a depth of 30 cm, the Cerrado organic matter was replaced by organic matter from newly introduced vegetation by as much as 75–100% for pasture and about 50% for EUC_HF, poorer in N for Eucalyptus stands (C/N larger than 18 for Eucalyptus stands). Under pasture, 0–30 cm SON stocks (0.25 kg N m^?2) were between 10 and 20% greater than those of the Cerrado (0.21 kg N m^?2), partly due to soil compaction (limit bulk density at soil surface from 1.23 for the Cerrado to 1.34 for pasture). Land development on the Cerrado increased SOC stocks in the 0–30 cm layer by between 15 and 25% (from 2.99 (Cerrado) to 3.86 (EUC_SR) kg C m^?2). When including litter layers, total 0–30 cm carbon stocks increased by 35% for EUC_HF (4.50 kg C m^?2) and 53% for EUC_SR (5.08 kg C m^?2), compared with the Cerrado (3.28 kg C m^?2), independently of soil compaction.     

Changes in sorghum production,soil P forms and P use efficiency following long-term application of manure,compost and straw in a Ferric Lixisol

Low phosphorus availability in cultivated soils limits sustainable crop production in sub‐Saharan Africa. This study aimed at evaluating the effect of long‐term application of different types of organic amendments on soil P forms, P use efficiency and sorghum yields. A long term experiment established in 1980 at Saria in Burkina Faso, comparing the effects of manure, compost and sorghum straw was used. Manure and compost significantly increased organic P and resin‐P by about 35% and 64%, respectively after 10 and 32 years of sorghum cultivation, and HCl‐P after 32 years of cultivation compared to the control. Manure significantly increased NaHCO₃-Pi and NaOH-Pi by 63% and 26%, respectively compared to the control. Sorghum straw had little effect on measured soil P forms. Manure and compost were the best in increasing sorghum grain yield, which effect were strongly correlated to soil pH, carbon and nitrogen. The partial factors productivities of P resulting from the application of studied organic amendments were similar and low, but significantly higher than that of the control treatment. Organic amendments with high P content, maintaining soil carbon and pH could be used to improve soil P availability, sorghum yield and reduce the demand for mineral phosphorus fertilizers.     

Environmental drivers of community diversity in a neotropical urban landscape: a multi-scale analysis

Context

Many aquatic communities are linked by the aerial dispersal of multiple, interacting species and are thus structured by processes occurring in both the aquatic and terrestrial compartments of the ecosystem.

Objectives

To evaluate the environmental factors shaping the aquatic macroinvertebrate communities associated with tank bromeliads in an urban landscape.

Methods

Thirty-two bromeliads were georeferenced to assess the spatial distribution of the aquatic meta-habitat in one city. The relative influence of the aquatic and terrestrial habitats on the structure of macroinvertebrate communities was analyzed at four spatial scales (radius = 10, 30, 50, and 70 m) using redundancy analyses.

Results

We sorted 18,352 aquatic macroinvertebrates into 29 taxa. Water volume and the amount of organic matter explained a significant part of the taxa variance, regardless of spatial scale. The remaining variance was explained by the meta-habitat size (i.e., the water volume for all of the bromeliads within a given surface area), the distance to the nearest building at small scales, and the surface area of buildings plus ground cover at larger scales. At small scales, the meta-habitat size influenced the two most frequent mosquito species in opposite ways, suggesting spatial competition and coexistence. Greater vegetation cover favored the presence of a top predator.

Conclusions

The size of the meta-habitat and urban landscape characteristics influence the structure of aquatic communities in tank bromeliads, including mosquito larval abundance. Modifications to this landscape will affect both the terrestrial and aquatic compartments of the urban ecosystem, offering prospects for mosquito management during urban planning.

     

Synthetic Aperture Radar (SAR) images improve habitat suitability models

Context

The ability to detect ecological networks in landscapes is of utmost importance for managing biodiversity and planning corridors.

Objectives

The objective of this study was to evaluate the information provided by a synthetic aperture radar (SAR) image for landscape connectivity modeling compared to aerial photographs (APs).

Methods

We present a novel method that integrates habitat suitability derived from remote sensing imagery into a connectivity model to explain species abundance. More precisely, we compared how two resistance maps constructed using landscape and/or local metrics derived from AP or SAR imagery yield different connectivity values (based on graph theory), considering hedgerow networks and forest carabid beetle species as a model.

Results

We found that resistance maps using landscape and local metrics derived from SAR imagery improve landscape connectivity measures. The SAR model is the most informative, explaining 58% of the variance in forest carabid beetle abundance. This model calculates resistance values associated with homogeneous patches within hedgerows according to their suitability (canopy cover density and landscape grain) for the model species.

Conclusions

Our approach combines two important methods in landscape ecology: the construction of resistance maps and the use of buffers around sampling points to determine the importance of landscape factors. This study was carried out through an interdisciplinary approach involving remote sensing scientists and landscape ecologists. This study is a step forward in developing landscape metrics from satellites to monitor biodiversity.

     

Oxidation of methane in the rhizosphere of rice plants

Oxidation of CH₄ in the rhizosphere of rice plants was quantified using (1) methyl fluoride, a specific inhibitor of CH₄ oxidation, and (2) measuring changes in plant-mediated CH₄ emission after incubation under air, N₂, or 40% O₂. No significant rhizospheric CH₄ oxidation was observed from rice plants in the ripening stage. CH₄ emission from rice plants 1 week before panicle initiation increased by 40% if CH₄ oxidation in the rhizosphere was blocked. The growth stage of the rice plant is an important factor determining the rhizospheric CH₄ oxidation. Fluctuation of rhizospheric CH₄ oxidation during the growing season may help to explain the observed seasonal CH₄ emission patterns in field studies. Measurements from four rice varieties showed that one variety, Pokkali, had higher rhizospheric CH₄ oxidation. This was probably because Pokkali was in an earlier growth stage than the other three varieties. Both in the early and in the late growth stages, incubation under N₂ caused a much stronger CH₄ flux than inhibition of CH₄ oxidation alone. Apparently, N₂ incubation not only blocked CH₄ oxidation but also stimulated methanogenesis in the rhizosphere. Incubation under a higher O₂ atmosphere (40% O₂) than ambient air decreased the CH₄ flux, suggesting that increasing the oxidation of the rice rhizosphere may help in reducing CH₄ fluxes from rice agriculture. The O₂ pressure in the rhizosphere is an important factor that reduces the plant-mediated CH₄ flux. However, inhibition of methanogenesis in the rhizosphere may contribute more to CH₄ flux reduction than rhizospheric CH₄ oxidation.