Estimation of genetic parameters for growth traits of Japanese flounder <Emphasis Type="Italic">Paralichthys olivaceus</Emphasis> using an animal model

To estimate genetic parameters of growth traits in Japanese flounder Paralichthys olivaceus, full-sib and half-sib families were produced in three consecutive years at the Beidaihe Central Experiment Station in China. Each year 8–28 families were produced. The body weight, body length and body depth at 180, 240, and 360 days of age were measured for 5,224 individuals. Four animal models were used to examine the phenotypic variation of growth traits and were compared using the likelihood ratio test. The results showed that estimates for additive genetic effect heritabilities varied greatly depending on the model, trait and age. The maternal effect had a significant impact on phenotypic variation only for body depth at 180 days of age, which explained 49% of the phenotypic variance. The ratio of full-sib effect to phenotypic variation ranged from 0.09 to 0.22. Growth traits all exhibited low heritability (0.13–0.39), indicating that there is the potential for family selection breeding for these traits in Japanese flounder. Using the full model with the fixed, full-sib family, additive and maternal genetic effects, genetic correlations among the three traits for fish of the same age were estimated to be more than 0.80. Generally, the genetic correlations gradually increased as age increased.     

Relationship between the incidence of latent infections caused by <Emphasis Type="Italic">Monilinia</Emphasis> spp<Emphasis Type="Italic">.</Emphasis> and the incidence of brown rot of peach fruit: factors affecting latent infection

Five field experiments were performed in commercial orchards located in Lleida (Spain) over three growing seasons, 2000–2002, in order to estimate the relationship between the incidence of latent infection caused by Monilinia spp. in peaches and the incidence of post-harvest brown rot. No latent infection was recorded at popcorn and the maximum incidence occurred pre-harvest; in some orchards a second peak was detected during the pit hardening period. Monilinia laxa is the most prevalent species isolated from peaches with brown rot. There was a positive correlation between the incidence of latent infection and that of post-harvest brown rot. The average incidence of latent infection during the crop season explained 55% of the total variation in the incidence of post-harvest brown rot. The effect of temperature (T) and duration of wetness (W) on the incidence of latent infection in peach and nectarine orchards was analysed using multiple regression. The regression analysis indicated that T and W jointly explained 83% of the total variation in the incidence of latent infection. The model predicts no latent infections when T < 8°C, and >22 h wetness are required when T = 8°C but only 5 h at 25°C are necessary for latent infection to occur. The incidence of brown rot and latent infection of peaches caused by M. laxa under controlled experimental conditions were also affected by T and W, as well as by fruit maturity and inoculum concentration. Latent infections were produced in fruit when T was not suitable for the development of brown rot symptoms. In these experiments more than 4–5 h of daily wetness were required after embryo growth in fruit sprayed to run-off with an inoculum concentration higher than 10⁴ conidia ml⁻¹ of M. laxa for brown rot and latent infections to develop. The fitted model obtained from the field data was able to predict the observed data obtained under controlled environmental conditions.     

An integrated approach of remote sensing,GIS and swarm intelligence for zoning protected ecological areas

Interest in protecting ecological areas is increasing because of land uses conflicts and environmental pressures. The optimal zoning of protected ecological areas belongs to a NP-hard problem because it is subject to both box and spatial constraints. A challenge in solving area optimization problems emerges with the increasing size of a study region. In this article, an integrated approach of remote sensing, GIS and modified ant colony optimization (ACO) is proposed for application in zoning protected ecological areas. Significant modifications have been made in the conventional ACO so that it can be further extended to solve zoning problems in large regions. An improved selection strategy is designed to accelerate the progress of sites selection for artificial ants. Another important modification in ACO is to incorporate the neighborhood diffusion strategy into pheromone updating. The optimal objective is to generate protected areas that maximize both ecological suitability and spatial compactness. The modified ACO model has been successfully applied to a case study involving an area of 25,483 cells in Dongguan, Guangdong, China. The experiments have demonstrated that the proposed model is an efficient and effective optimization technique for generating optimal protection. The modified ACO model only requires approximately 119 s for determining near-optimal solutions. Furthermore, the proposed method performs better than other methods, including simulated annealing, genetic algorithm, iterative relaxation, basic ACO, and density slicing.     

A riverscape perspective on habitat associations among riverine bird assemblages in the Lake Champlain Basin,USA

The riverscape perspective recognizes the heterogeneous habitat types within the stream corridor as a single, integrated ecological unit operating across spatial scales. Although there is ample evidence that the riverscape notion is appropriate in understanding the physical phenomena of stream corridors, significantly less attention has focused on its ecological ramifications. To this end, we surveyed riverscape habitat variables and bird community characteristics in the Champlain Valley of Vermont, USA. From the data collected, we used information theoretic methodology (AIC_c) to model relationships between bird community attributes and key habitat variables across the riverscape. Our models with the greatest support suggest that riverine bird communities respond to a suite of characteristics; representing a variety of riverscape habitats at the in-stream, floodplain, and riparian levels. Channel slope, drainage area, percent conifers, and in-stream habitat condition were among the most influential variables. We found that piscivores are potentially important indicators of riverscape condition, responding to a host of variables across the riverscape. Our results endorse a holistic approach to assessing and managing the mosaic of patches in the riverscape and suggest that a riverscape approach has significant conservation potential.     

Determining landscape extent for succession and disturbance simulation modeling

Dividing regions into manageable landscape units presents special problems in landscape ecology and land management. Ideally, a landscape should be large enough to capture a broad range of vegetation, environmental and disturbance dynamics, but small enough to be useful for focused management objectives. The purpose of this study was to determine the optimal landscape size to summarize ecological processes for two large land areas in the southwestern United States. We used a vegetation and disturbance dynamics model, LANDSUMv4, to simulate a set of nine scenarios involving systematically varied topography, map resolution, and model parameterizations of fire size and fire frequency. Spatial input data were supplied by the LANDscape FIRE Management Planning System (LANDFIRE) prototype project, an effort that will provide comprehensive and scientifically credible mid-scale data to support the National Fire Plan. We analyzed output from 2,000 year simulations to determine the thresholds of landscape condition based on the variability of burned area and dominant vegetation coverage. Results show that optimal landscape extent using burned area variability is approximately 100 km² depending on topography, map resolution, and model parameterization. Variability of dominant vegetation area is generally higher and the optimal landscape sizes are larger in comparison to those features determined from burned area. Using the LANDFIRE project as a case study, we determined landscape size and map resolution for a large mapping project, and showed that optimal landscape size depends upon geographical, ecological, and management context. This paper was written and prepared by U.S. Government employees on official time, and therefore is in the public domain and not subject to copyright. The use of trade or firm names in this paper is for reader information and does not imply endorsement by the U.S. Department of Agriculture of any product or service.     

Landscape context and selection for forest edge by breeding Brown-headed Cowbirds

We evaluated support for four alternate hypotheses explaining the distribution of breeding Brown-headed Cowbirds (Molothrus ater) in forests at varying distances from the forest edge in three Midwestern USA landscapes with varying amounts of forest fragmentation (core forest area ranged from 5 to 70%). We focused on breeding cowbirds’ use of forest because of the risk of nest parasitism to forest-dwelling hosts and to identify factors affecting breeding cowbird habitat selection. We compared distances of cowbird locations in the forest from the forest edge (“edge distances”) to distances of random forest locations in the entire landscape or within individual cowbird home ranges. We analyzed 1322 locations of 84 cowbirds across three landscapes. We found support for the landscape context hypothesis that breeding cowbird preference for forest edge varied with landscape context. Ninety percent of cowbird locations were within 150–350 m of forest edge, despite the overall availability of forest at greater distances from edge (as far as 500–1450 m) both within cowbird home ranges and the entire forested landscape. Cowbird preference for edge varied by landscape context largely due to differences in the availability of forest edge. In a highly fragmented forest cowbirds utilized the entire forest and likely viewed it as “all edge.” In less fragmented forests, cowbirds preferred edge. We consider how variation in cowbird edge preference might relate to patterns in host abundance, host diversity, and host quality because cowbird movements indicate they are capable of using forest farther from edges.     

Response of snails and slugs to fragmentation of lowland forests in NW Germany

Habitat fragmentation is a major cause for species loss, but its effect on invertebrates with low active dispersal power, like terrestrial gastropods, has rarely been studied. Such species can not cross a hostile habitat matrix, for which the predictions of island theory, such as positive relations between species richness and patch size, should apply. In order to test this prediction, we studied gastropod species diversity by assessing gastropod assemblage characteristics from 35 sites in 19 fragments of deciduous old-growth forests in the Lower Rhine Embayment, Germany. Assemblages differed between larger (≥700 ha) and smaller forests (<400 ha), those of large forests held a higher percentage of forest species. Although α-diversity was similar between the two forest size classes, small forests often comprised matrix species, resulting in a higher β-diversity. Edge effects on the species richness of matrix species were noticeable up to 250 m into the forest. Hierarchical partitioning revealed that distance to disturbances (external edge, internal edges like roads) explained most assemblage variables, whereas forest size and woodland cover within a 1 km radius from the sites explained only a few assemblage variables. Densities of two forest-associated species, Discus rotundatus and Arion fuscus, decreased with forest size. Yet, forest size was positively correlated with richness of typical forest species and densities of Limax cinereoniger. The latter species seems to need forests of >1,000 ha, i.e., well above the size of most fragments. In conclusion, the prediction is valid only for forest species. The response to fragmentation is species specific and seems to depend on habitat specialization and macroclimatic conditions. Jean-Pierre Maelfait: Deceased.     

Mapping hotspots of multiple landscape functions: a case study on farmland afforestation in Scotland

Many conservation and restoration efforts in developed countries are increasingly based on the premise of recognising and stimulating more ‘multi-functionality’ in agricultural landscapes. Public policy making is often a pragmatic process that involves efforts to negotiate trade-offs between the potentially conflicting demands of various stakeholders. Conservationists’ efforts to influence policy making, can therefore benefit from any tool that will help them to identify other socio-economic functions or values that coincide with good ecological conservation options. Various types of socio-economic objectives have in recent years been mapped across landscapes and so there are now important opportunities to explore the spatial heterogeneity of these diverse functions across the wider landscape in search of potential spatial synergies, i.e. ‘multiple win locations’ or multifunctional ‘hotspots’. This paper explores the potential occurrence of such synergies within the agricultural landscape of northeast Scotland and evaluates an existing woodland planting policy using and combining three different policy objectives. Our results show that there are indeed broad areas of the studied landscape where multiple objectives (biodiversity, visual amenity and on-site recreation potential) could be achieved simultaneously (hotspots), and that the case study which we evaluate (the Farm Woodland Premium Scheme) could be much better spatially targeted with regards to each individual objective as well as with regards to these hotspots of multifunctionality.

Combining top-down and bottom-up dynamics in land use modeling: exploring the future of abandoned farmlands in Europe with the Dyna-CLUE model

Land use change is the result of interactions between processes operating at different scales. Simulation models at regional to global scales are often incapable of including locally determined processes of land use change. This paper introduces a modeling approach that integrates demand-driven changes in land area with locally determined conversion processes. The model is illustrated with an application for European land use. Interactions between changing demands for agricultural land and vegetation processes leading to the re-growth of (semi-) natural vegetation on abandoned farmland are explicitly addressed. Succession of natural vegetation is simulated based on the spatial variation in biophysical and management related conditions, while the dynamics of the agricultural area are determined by a global multi-sector model. The results allow an exploration of the future dynamics of European land use and landscapes. The model approach is similarly suitable for other regions and processes where large scale processes interact with local dynamics.     

Summer spatial patterning of chukars in relation to free water in western Utah

Free water is considered important to wildlife in arid regions. In the western United States, thousands of water developments have been built to benefit wildlife in arid landscapes. Agencies and researchers have yet to clearly demonstrate their effectiveness. We combined a spatial analysis of summer chukar (Alectoris chukar) covey locations with dietary composition analysis in western Utah. Our specific objectives were to determine if chukars showed a spatial pattern that suggested association with free water in four study areas and to document summer dietary moisture content in relation to average distance from water. The observed data for the Cedar Mountains study area fell within the middle of the random mean distance to water distribution suggesting no association with free water. The observed mean distance to water for the other three areas was much closer than expected compared to a random spatial process, suggesting the importance of free water to these populations. Dietary moisture content of chukar food items from the Cedar Mountains (59%) was significantly greater (P < 0.05) than that of birds from Box Elder (44%) and Keg-Dugway (44%). Water developments on the Cedar Mountains are likely ineffective for chukars. Spatial patterns on the other areas, however, suggest association with free water and our results demonstrate the need for site-specific considerations. Researchers should be aware of the potential to satisfy water demand with pre-formed and metabolic water for a variety of species in studies that address the effects of wildlife water developments. We encourage incorporation of spatial structure in model error components in future ecological research.