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171.
Blair L. Waldron Michael D. Peel Steven R. Larson Ivan W. Mott J. Earl Creech 《Euphytica》2017,213(3):67
High fertilizer prices and improved environmental stewardship have increased interest in grass-legume mixed pastures. It has been hypothesized, but not validated, that the ecological combining ability between grasses and legumes can be improved by breeding specifically for mixture performance. This experiment examined the predicted efficiency of selection in a grass monoculture environment to indirectly improve tall fescue (Lolium arundinaceum (Schreb.) Darbysh.) forage mass in a grass-legume mixture. Heritability, genetic and rank correlations, and selection efficiencies were estimated for forage mass in a tall fescue half-sib population grown as spaced-plants overseeded with either turf-type tall fescue (monoculture) or alfalfa (mixture). Heritability for tall fescue forage mass in monoculture ranged from 0.32 to 0.70 and were always similar or greater than those in mixture (range 0.27–0.55) for four successive harvests and annual total. Genetic correlations between monoculture and mixture tall fescue forage mass varied with values of 0.48, 0.92, ?0.31, 0.70, and 0.25 in June, July, August, October, and annual total, respectively. Indirect selection efficiencies exceeded or approached direct selection for mixtures only in July and October (1.29, and 0.73, respectively). Whereas, indirect selection efficiencies were low in June, August, and annual forage mass (0.58, ?0.31, and 0.28, respectively). Moreover, low Spearman’s rank correlations (?0.03 to 0.35) indicated differing half-sib family performance between the monoculture and mixture environments. Results indicate that direct selection should be used to improve tall fescue forage mass in a grass-legume mixture, and support the hypothesis of increasing ecological combining ability by breeding for mixtures per se. 相似文献
172.
Adam Martin-Schwarze Jarad Niemi Philip Dixon 《Journal of Agricultural, Biological & Environmental Statistics》2017,22(4):465-480
Abundance estimates from animal point-count surveys require accurate estimates of detection probabilities. The standard model for estimating detection from removal-sampled point-count surveys assumes that organisms at a survey site are detected at a constant rate; however, this assumption can often lead to biased estimates. We consider a class of N-mixture models that allows for detection heterogeneity over time through a flexibly defined time-to-detection distribution (TTDD) and allows for fixed and random effects for both abundance and detection. Our model is thus a combination of survival time-to-event analysis with unknown-N, unknown-p abundance estimation. We specifically explore two-parameter families of TTDDs, e.g., gamma, that can additionally include a mixture component to model increased probability of detection in the initial observation period. Based on simulation analyses, we find that modeling a TTDD by using a two-parameter family is necessary when data have a chance of arising from a distribution of this nature. In addition, models with a mixture component can outperform non-mixture models even when the truth is non-mixture. Finally, we analyze an Ovenbird data set from the Chippewa National Forest using mixed effect models for both abundance and detection. We demonstrate that the effects of explanatory variables on abundance and detection are consistent across mixture TTDDs but that flexible TTDDs result in lower estimated probabilities of detection and therefore higher estimates of abundance.Supplementary materials accompanying this paper appear on-line. 相似文献
173.
Hacer Handan Altinok Canan Can Mahmut Alper Altinok 《European journal of plant pathology / European Foundation for Plant Pathology》2018,150(3):609-621
Fusarium oxysporum f. sp. melongenae (Fomg), causal agent of Fusarium wilt of eggplant, is a serious pathogen in open fields and greenhouses. Inter-simple sequence repeat (ISSR) banding profiles, sequence analyses of inter-transcribed-spacer (ITS), translation elongation factor 1-alpha (TEF-1α), and actin (actA) DNA regions were employed in this study to determine genetic diversity and population structure of Fomg isolates obtained from Turkey. For ISSR study, (ACTG)5, (GACAC)3, (GACA)4, (GATA)4, HVH(TG)7 and (CA)8RG primers were selected from a set of 16. Discriminative ability of the primers revealed with various indices including polymorphic information content (PIC), and mean PIC value was calculated as 0.26. The ISSR data revealed 31 loci belonging to 202 Fomg isolates and 14 of them were found to be polymorphic. The isolates on neighbor joining ISSR tree were grouped into two major clusters which separated Fomg and outgroup isolates. Population structure was investigated based on bayesian modeling and results indicated five subpopulations (K = 5, ?K = 205.42). Mean genetic and geographical distances among sampling locations revealed only a weak and insignificant correlation (r = 0.583, P = 0.06). Phylogenetic analyses were carried out with ITS, TEF-1α and actA DNA regions with a selected subset of 30 Fomg, along with one non-host and one outgroup isolates. Since ITS region were not able to provide a meaningful separation, TEF-1α and actA sequences of each organism were concatenated individually to build a dendrogram. The clustering tree successfully separated the Fomg, non-host and outgroup isolates in which all Fomg were located on the same branch, forming a monophyletic group in the dendrogram. 相似文献
174.
Thomas H. Galley Frederico M. Batista Richard Braithwaite Jon King Andy R. Beaumont 《Aquaculture International》2010,18(3):315-325
The blue mussel Mytilus
edulis is a commercially important species whose fishery and culture generally relies on natural spat collection. Hatchery-production
could provide an alternative source of seed, enabling reliable expansion of the industry. Mussel spawning and larval rearing
trials were carried out to optimise elements of hatchery production. Culturing fertilised eggs at low density (20–200 eggs cm−2) rather than high density (400–720 eggs cm−2) significantly improved the quality of first veliger larvae and differences in this improvement were evident between the
eggs from different females (maternal effects). Veliger larval growth at 17 or 21°C was significantly faster than growth at
14°C. Feeding veliger larvae an identical total ration either daily or at 2–3 day intervals did not significantly affect their
growth. Different microalgal diets (1: Isochrysis sp. (clone T-ISO), 2: Chaetoceros
calcitrans forma pumilus, 3: C. muelleri, 4: mixed Isochrysis sp. (clone T-ISO) and C. calcitrans f. pumilus, and 5: mixed Isochrysis sp. (clone T-ISO) and C. muelleri) were tested on veliger larval growth and mixed diets outperformed single-species diets. 相似文献
175.
Moytri RoyChowdhury Yulin Jia Aaron Jackson Melissa H. Jia Robert Fjellstrom Richard D. Cartwright 《Euphytica》2012,184(1):35-46
The Pi-z gene in rice confers resistance to a wide range of races of the rice blast fungus, Magnaporthe oryzae. The objective of this study was to characterize Pi-z in 111 rice germplasm accessions using DNA markers and pathogenicity assays. The existence of Pi-z in rice germplasm was detected by using four simple sequence repeat (SSR) markers (RM527, AP4791, AP5659-1, AP5659-5) closely
linked to Pi-z, and was verified using pathogenicity assays with an avirulent strain (IE1k) and two virulent races (IB33 and IB49). Among
111 germplasm accessions evaluated, 73 were found to contain the Pi-z gene using both SSR markers and pathogenicity assays. The remaining 38 germplasm accessions were found to be inconsistent
in their responses to the blast races IB33, IEIk and IB49 with expected SSR marker alleles, suggesting the presence of unexpected
SSR alleles and additional R gene(s). These characterized germplasm can be used for genetic studies and marker-assisted breeding for improving blast resistance
in rice. 相似文献
176.
Yalong Liu Ping Wang Genxing Pan David Crowley Lianqing Li Jinwei Zheng Xuhui Zhang Jufeng Zheng 《Journal of Soils and Sediments》2016,16(5):1460-1471
Purpose
Rice paddy soils undergo pedogenesis driven by periodic flooding and drainage cycles that lead to accumulation of organic matter and the stratification of nutrients and oxygen in the soil profile. Here, we examined the effects of continuous rice cultivation on microbial community structures, enzyme activities, and chemical properties for paddy soils along a chronosequence representing 0–700 years of rice cropping in China.Materials and methods
Changes in the abundance and composition of bacterial and fungal communities were characterized at three depths (0–5, 5–10, and 10–20 cm) in relation to organic carbon, total nitrogen, dissolved organic carbon, microbial biomass carbon/nitrogen, and activities of acid phosphatase, invertase, and urease.Results and discussion
Both soil organic carbon and total nitrogen increased over time at all three depths, while pH generally decreased. Microbial abundance (bacteria and fungi) and invertase and urease activity significantly increased with the duration of rice cultivation, especially in the surface layer. Fungal abundance and acid phosphatase activity declined with depth, whereas bacterial abundance was highest at the 5–10-cm soil depth. Profiles of the microbial community based on PCR-DGGE of 16S rRNA indicated that the composition of fungal communities was strongly influenced by soil depth, whereas soil bacterial community structures were similar throughout the profile.Conclusions
Soil bioactivity (microbial abundance and soil enzymes) gradually increased with organic carbon and total nitrogen accumulation under prolonged rice cultivation. Microbial activity decreased with depth, and soil microbial communities were stratified with soil depth. The fungal community was more sensitive than the bacterial community to cultivation age and soil depth. However, the mechanism of fungal community succession with rice cultivation needs further research.177.
Laboratory rearing of insects for scientific research ensures a constant supply of insects. However, laboratory colonies may
diverge genetically and/or phenotypically from wild populations due to selection pressures in their artificial environment.
This study examined how variation in a colony ofTrichoplusia ni influenced reproducibility over time of bioassays of toosendanin (a limonoid extracted from the bark ofMelia azedarach). In four of five experiments insect growth was reduced significantly (P=0.05) by the presence of toosendanin in the diet. The fifth experiment showed the same trend, but the effect was not significant.
Mean larval mass of both control and treated insects also varied greatly among experiments. The considerable variability observed
in this population highlights the importance of replicating experiments in time, and not just space, to confirm reproducibility
of treatment effects.
http://www.phytoparasitica.org posting Jan. 23, 2007. 相似文献
178.
Plant diversity of secondary forests in response to anthropogenic disturbance levels in montane regions of northeastern China 总被引:4,自引:0,他引:4
The effects of anthropogenic disturbances on forest structure and plant diversity of secondary forest ecosystems were evaluated
based on the classification by site factors in the montane regions of northeastern China. Forty-five sample plots containing
720 sub-plots of overstory species (8 m × 8 m), 1,440 quadrats of understory species (2 m × 2 m), and 1,440 quadrats of herbaceous
layer species (1 m × 1 m) were clustered into five groups (G1, G2, G3, G4 and G5) by site variables with Hierarchical Cluster
Analysis. Meanwhile, the disturbance levels corresponding to the five groups were determined according to the factors influencing
human disturbances (D0-G2, D1-G1, D2-G3, D3-G5, and D4-G4). Species diversities of overstory, understory, herbaceous layer
and overall species were evaluated using species number, Margalef index, Pielou index, Shannon–Wiener index, and Simpson index;
and β-diversities (Whittaker index, Cody index). Basal area of stands exhibited a decreasing trend along the disturbance level
due to a gradual increase in the extraction of timber by the human disturbances. The indices of species diversity suggested
that overstory and understory species were distributed evenly among the groups or disturbance levels. There were no absolutely
dominant tree species in the secondary forest ecosystems. The differences in site factors and the current disturbance intensities
were not intense enough to lead to loose changes in overstory and understory species. The species diversity indices exhibited
the maximum values at D3 (G5) for herbaceous layer species; this may suggest that the current disturbance intensities were
intense enough to lead the changes of herbaceous layer species. Three rare and endangered species (Juglans mandshurica, Fraxinus mandshurica and Acanthopanax senticosus) were found within the secondary forests. These rare and endangered species appeared in each clustered group or disturbance
level, which suggested that the current disturbance intensity in the study area was not strong enough to influence the distribution
of rare and endangered species. The current disturbances in the secondary forests may not lead to a decrease in stability
and complexity of the overstory and understory species, but the higher disturbance level may be intense enough to change the
habitat fitness for the herbaceous species.
Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized authors. 相似文献
179.
Anne Ganteaume Mercedes Guijarro Marielle Jappiot Carmen Hernando Corinne Lampin-Maillet Pedro Pérez-Gorostiaga José A. Vega 《Annals of Forest Science》2011,68(3):531-541
• Introduction
Wildfires are considered the most important disturbance in the Mediterranean Basin, and some are propagated over long distances due to lift-off and ignition of firebrands. 相似文献180.
Haunshi S Shanmugam M Padhi MK Niranjan M Rajkumar U Reddy MR Panda AK 《Tropical animal health and production》2012,44(5):969-973
The present study was conducted to evaluate two Indian native chicken breeds, namely, Aseel and Kadaknath for fertility, hatchability,
genetic parameters of juvenile growth traits, and semen quality traits at the onset of sexual maturity. The fertility was
similar in Aseel (86.96%) and Kadaknath (85.15%); however, a relatively higher hatchability was observed in Kadaknath (77.94%)
than Aseel (70.74%). Heritability estimates of body weights at 4 weeks of age were almost similar in Aseel (0.37) and Kadaknath
(0.39), while the estimate of body weight at 6 weeks of age was higher in Aseel (0.42) than Kadaknath (0.31). The heritability
estimate of shank length at 6 weeks of age was lower in Aseel (0.16) compared to Kadaknath (0.35). The age at first egg in
the flock was comparable in Aseel (148 days) and Kadaknath (150 days). Aseel breed with significantly (P ≤ 0.001) higher body weight, absolute and relative testes weights had significantly higher semen volume (P ≤ 0.05) and sperm motility (P ≤ 0.01) but had lower seminal plasma cholesterol level (P ≤ 0.05) as compared to Kadaknath. It can be concluded that there is a scope for genetic improvement of these two native breeds
for juvenile growth traits since heritability estimates of these traits were relatively high. 相似文献