Growth,survival, body composition and amino acid profile of Macrobrachium borellii against the limitation of feeds with different C:N ratios with comments about application in integrated multi‐trophic aquaculture

One way to attain more sustainable aquaculture systems is through the species diversification and optimization of the feed input, such as obtained by integrated multi‐trophic aquaculture (IMTA). Macrobrachium borellii is a native freshwater prawn that reunites many useful features to be implemented in an IMTA. The aim of this study was to gather information about to which extent M. borellii can survive, grow and maintain body composition against feed limitation. The C:N ratios of feedstuffs were variable in order to simulate a hypothetical scenario of an integrated culture with fish of different trophic habits. The nutritional aspects (amino acid profile and proximal composition) of feeds and prawns were also analysed. Macrobrachium borellii could grow, survive and maintain the proximal content and C:N ratio of its muscle tissue with all feedstuffs but exhibited higher biomass gain and specific growth rate consuming feeds with lower C:N ratios. In this view, the integration of this prawn with omnivore or carnivore fish species should be recommended. The amino acid profile exhibited little variation before and after the experimental period, and was rich in lysine, leucine and arginine. In this study, it was also discussed the nutritional aspects of M. borelliii as a valuable by‐product to human and animal nutrition.     

Geostatistical visualisation and spatial statistics for evaluation of the dispersion of epidemic highly pathogenic avian influenza subtype H5N1

The aim of this study was to evaluate a range of statistical and geostatistical methods for their usefulness in providing insights into how highly pathogenic avian influenza (HPAI) subtype H5N1 might spread through a national population of village poultry. The insights gained allow the generation of disease dispersion hypotheses. The case study data set consisted of 161 outbreaks of HPAI subtype H5N1 in village poultry reported in Romania between October 2005 and June 2006. Reports of village outbreaks (%) occurred in three waves: October-December (14%), February-March (16%), and May-June (68%). Risk mapping - based on variography and kriging - was used to visualize the evolution of the epidemic. Outbreaks first appeared in eastern and southern Romania, particularly within an area that forms part of the Danube River Delta. The largest phase of the epidemic affected villages in all parts of central, southern, and eastern Romania, but outbreaks were clustered in central Romania. Outbreaks spread in an east to west direction. By using geostatistical visualisation and spatial statistics, the evolution of the epidemic could be characterised into two parts: disease introduction, local spread, and sporadic outbreaks, and long-distance disease spread with rapid epidemic propagation. This is consistent with the hypothesis that the environment and landscape (specifically the Danube River Delta) played a critical role in the introduction and initial spread of HPAI subtype H5N1 during the autumn and winter of 2005, and that the movement of poultry might have introduced the infection into central Romania during the spring and summer of 2006. Further research focusing on the spatio-temporal interface between the two parts of the epidemic might reveal how and why it progressed from a confined, local epidemic to a large, national epidemic. Such information would assist efforts to limit the global spread of HPAI subtype H5N1.     

Parentage assignment in hybrid abalones (Haliotis rufescens × Haliotis discus hannai) based on microsatellite DNA markers

Parentage analysis in aquaculture determines genealogical relationships between broodstock and progeny when the parents are unknown. Thus, parentage analysis is a useful tool to establish pedigree reports in molecular‐assisted selection programs. Here, we evaluated 10 heterologous microsatellite markers for parentage assignment in abalone hybrids produced from 43 abalone broodstocks of red abalone (Haliotis rufescens) and Japanese abalone (H. discus hannai). The allele frequencies, exclusion probabilities and broodstock contributions were calculated using CERVUS, PAPA and GERUD software. The polymorphic information content (PIC) values showed that most of the microsatellite loci were highly informative (>0.7) and more than 90% of parentage assignment was possible with a minimum of 5–6 microsatellite markers. Parentage assignment for hybrid and pure‐red progeny showed a better performance than pure‐Japanese progeny. This result could be due to the high level of allele loss in the parental genotypes. In addition, results indicated that only two sires contributed over 80% and 90% of red and hybrid progenies, respectively. This study gives a new molecular tool to support marker‐assisted selection in abalone hybrids produced in Chile.     

SNP discovery and gene annotation in the surf clam Mesodesma donacium

The main objective of this research was to identify single‐nucleotide polymorphisms (SNPs) from an Expressed Sequences Tags (EST) data set generated by 454 pyrosequencing in the soft clam Mesodesma donacium. A total of 180 159 ESTs were yielded from a M. donacium cDNA library. De novo assembly was performed using stringent calling parameters, producing 10 178 contigs and 41 765 singletons. Here, a total of 2594 SNPs were discovered related to 613 consensus sequences, achieving a frequency of 1 SNPs per 260 bp. SNP variants showed that A/G, A/T and C/T were the most abundant among the identified polymorphisms. We validated a total of 12 SNPs loci by HRMA for annotated genes such as heat shock protein‐70 and the translation elongation factor 1‐alpha. The Gene Ontology analysis regarding molecular function level revealed that sequences with SNPs were mainly classified to protein and nucleotide binding, as well hydrolase activity, ion binding and oxidoreductase activity. Further, biological processes like cellular and metabolic process, biogenesis, localization and biological regulation were highly annotated. The most expressed genes were related to the mitochondrial electron transport chain, senescence‐associated protein, ubiquitin and actin. Interestingly, some relevant genes related to immune response and biomineralization showed a high abundance, such as tumor necrosis factor (TNF)‐alpha‐receptor‐like protein, serine protease inhibitor, heat shock protein, aragonite‐binding protein and ferritin. This study contributes to relevant genes associated with functional polymorphisms and gives an overview for future genetic investigations.     

Hybridization between Haliotis rufescens and Haliotis discus hannai: evaluation of fertilization,larval development,growth and thermal tolerance

Two introduced abalone species are currently produced in Chile, red abalone Haliotis rufescens and Japanese abalone Haliotis discus hannai. However, red abalone accounts for 99% of total production, while the Japanese abalone has not adapted well to Chilean coastal waters. This study reports the hatching, growth and thermal tolerance performance in interspecific hybrids produced between red (R) and Japanese (J) abalone. Our results show that egg age and sperm concentration were critical factors to produce hybrids. The cross R♀ × J♂ showed a fertilization rate of 55.3 ± 3.5% using 20‐min‐old eggs and sperm concentrations of 14 × 10⁶ cells mL^?1, while the reciprocal cross (J♀ × R♂) was not successful. Further, larval development stages were similar in RR, JJ and RJ hybrid abalones. Among the experimental trials, settlement rate varied from 12.3% to 18.6% and final survival from 20.1% to 31.7%, being the RJ hybrid rates intermediate between parental species. The final shell lengths were similar between RR and RJ hybrids, but significantly higher in JJ abalones. In addition, thermal tolerance was ascertained due its pivotal role for the abalone physiology. Thus, RJ hybrids showed the highest HSP70 gene expression and offers new possibilities to expand Chilean abalone production in warm waters zones.     

Regeneration of volatile compounds in Fuji apples following ultra low oxygen atmosphere storage and its effect on sensory acceptability

The aim of this work was to assess whether extra time spent under AIR conditions after storage in an ultra low oxygen (ULO) atmosphere could allow the regeneration of volatile compound emission without negatively affecting quality parameters and the consumer acceptability of Fuji apples. Fruits were stored for 19 and 30 weeks at 1 degrees C and 92% RH under ULO atmosphere conditions (1 kPa O 2:1 kPa CO 2) or under ULO conditions followed by different periods (2 and 4 weeks) in cold AIR atmosphere (ULO + 2w or ULO + 4w, respectively). Standard quality and emission of volatile compounds were analyzed after storage plus 1 and 7 days at 20 degrees C. Sensory attributes and acceptability were also determined after 7 days at 20 degrees C. The extra period of 30 weeks in an AIR atmosphere after ULO storage resulted in an increase in the concentration of the compounds that most contribute to the flavor of Fuji apples. These fruits were relatively well accepted by consumers despite a slight decline in firmness and acidity.     

Long-term storage of Pink Lady apples modifies volatile-involved enzyme activities: consequences on production of volatile esters

Pink Lady apples were harvested at commercial maturity and stored at 1 degrees C and 92% relative humidity under either air or controlled atmosphere conditions (2 kPa O 2:2 kPa CO 2 and 1 kPa O 2:1 kPa CO 2) for 27 weeks. Data on the emission of volatile compounds and on the activity of some related enzymes in both skin and flesh tissues were obtained during subsequent shelf life at 20 degrees C. Major effects of storage atmosphere and poststorage period were observed on the emission of volatile esters and their precursors. Changes in the production of volatile esters were partly due to alterations in the activity of alcohol o-acyltransferase, but the specific esters emitted by fruit after storage also resulted largely from modifications in the supply of the corresponding substrates. Samples stored under air were characterized by higher availability of acetaldehyde, whereas those stored under CA showed enhanced emission of the alcohol precursors ethanol and 1-hexanol (2 kPa O 2) and 1-butanol (1 kPa O 2), with accordingly higher production of ethyl, hexyl, and butyl esters. Multivariate analysis revealed that a large part of the observed differences in precursor availability arose from modifications in the activity of the enzymes considered. Higher pyruvate decarboxylase activity in air-stored fruit possibly accounted for higher acetaldehyde levels in these samples, while storage under 1 kPa O 2 led to significantly decreased lipoxygenase activity and thus to lessened production of 1-hexanol and hexyl esters. Low acetaldehyde availability together with enhanced hydroperoxide lyase and alcohol dehydrogenase levels in these fruits are suggested to have led to higher emission of 1-butanol and butyl esters.     

An integrated approach to assess carbon credit from improved forest management

Fossil fuel consumption in recent decades has caused the rise of CO₂ concentration in the atmosphere, with negative consequences on the environment and human health. This study develops a methodological framework to quantify carbon credits from carbon-oriented forest management and evaluates the economic sustainability of their sale. Application of the framework to two forest compartments with long-lasting active management in the Western Italian Alps showed the feasibility of the methodology and provided insights on its replication in other contexts. Particularly, the Carbon-oriented scenario led to a reduction of both the extracted wood volume (10% and 6.5% CASE1 and CASE2, respectively) and Net Present Value (32% and 29%), leading to a carbon credit price of 19.6 € MgCO_2eq^?1? and 44.1 € MgCO_2eq^?1 to counteract these losses.

This work allows us to highlight the factors needed to design and evaluate alternative forest management options while considering the consequences of climate change. Moreover, the hypothesized scenarios include an economic remuneration of the positive externalities provided by sustainable forest management.

Finally, the proposed workflow entails undeniable environmental benefits while contrasting climate change but still looks undesirable with respect to the traditional timber-oriented management in compartments where high-quality wood products can be obtained.     

Validation of a critical nitrogen dilution curve for hybrid ryegrasses

One of the challenges of modern grassland systems is to minimize nitrogen (N) fertilization without negatively affecting the forage yield. Therefore, critical N dilution curves (Nc = a_c W^?b) have been developed in different species to improve N fertilization management. The aim of this study was to validate a critical N dilution curve for hybrid ryegrasses. Two field experiments were conducted in southern Chile. Treatments were the factorial combination of two hybrid ryegrasses (Shogun and Trojan cultivars) and seven N fertilization rates (0, 50, 100, 200, 350, 525 and 700 kg N/ha). Factors were arranged in a split‐plot design, where forage species were assigned to main plots and N rates to subplots that were randomized into four blocks. A wide range in forage yield and plant N concentration was observed (yield: 0.16 and 3.9 Mg DM/ha and N: 1.6% and 5.1%). The variations in these traits were principally explained by the N levels and harvest times. Relative yield responses of both cultivars were significantly (p < 0.001, R² = 0.81–0.87) related to the nitrogen nutrition index (NNI) calculated with different critical N dilution curves. However, the NNI calculated with N dilution curves from annual ryegrass best described the relative yield response of hybrid ryegrass. Therefore, this validated critical N dilution curve (%N_c = 4.1W^?0.38) will serve as a useful diagnosis tool for improving the N fertilization management of grazing systems for hybrid ryegrasses.