Identification of unknown apple (<Emphasis Type="Italic">Malus</Emphasis> × <Emphasis Type="Italic">domestica</Emphasis>) cultivars demonstrates the impact of local breeding program on cultivar diversity

Apple (Malus?×?domestica Borkh.) trees, either abandoned or cared for, are common on the North American landscape. These trees can live for decades, and therefore represent a record of large- and small-scale agricultural practices through time. Here, we assessed the genetic diversity and identity of 330 unknown apple trees in northern Minnesota with 9 simple sequence repeat (SSR) markers. The unknown (not identified by cultivar name) trees were compared to >?1000 named cultivars in the U.S. Department of Agriculture Plant Genetic Resources Unit Malus collection and also to each other to identify repeated genotypes. Overall, the 330 unknown trees had high diversity (average H_e?=?0.75), and consisted of 264 unique genotypes. A total of 76 of the unknown trees were matched to 20 different named cultivars, and these cultivars were mainly derived from either the local breeding program at the University of Minnesota, or were Russian cultivars imported for horticulture in the northern US. This study demonstrates the importance of local breeding programs, and also the challenges associated with identifying clones in a genetically diverse crop like apple.     

Brook trout occupancy in rivers and streams of the Mixedwood Plains Ecozone,Ontario

Brook trout (Salvelinus fontinalis) are an iconic freshwater salmonid native to northeastern North America. They prefer cold, clean rivers and lakes, and have been culturally, socially and economically valued for decades. Overharvest and deforestation associated with European settlement in southern Ontario, Canada led to notable declines in brook trout abundance in rivers and streams by the late 1800s. Today, they are threatened by further habitat degradation, non-native species, and climate change. In this study, we document brook trout occupancy in rivers and streams of the Mixedwood Plains Ecozone in southern Ontario, between 1970–1980 and 2000–2010. We used generalised linear models to determine occupancy variation between the two time periods at five spatial scales spanning multiple watershed levels. We detected a decline in occupancy between time periods for the tertiary (from 23% to 17%) and quaternary (from 35% to 22%) watershed scales. In the Credit River-Sixteen Mile Creek watershed, mean occupancy decreased to a third of past estimate (from 31% to 10%). For a subset of 86 sites with overlapping sampling in both periods no temporal trend was detected, but a post-hoc analysis indicated low statistical power (0.07), which suggested that more intensive sampling would be needed to better quantify brook trout occupancy changes at this scale. The occupancies quantified for the past period in our study may serve as benchmarks for brook trout restoration efforts.