Distinct antigen recognition pattern during zoonotic visceral leishmaniasis in humans and dogs

Leishmania infantum is a causative agent of endemic zoonotic visceral leishmaniasis (VL) in regions of South America and the Mediterranean. Dogs are the major reservoirs for L. infantum in these regions, and control of disease in dogs could have a significant impact on human disease. Although dogs share many symptoms of VL with humans as a result of L. infantum infection, they also show some unique clinical manifestations, which are often a combination of visceral and cutaneous leishmaniasis, suggesting different mechanisms of disease development in dogs and humans. Here, we compare antibody responses of dogs and humans with VL to various defined leishmanial antigens. Parasite lysate and K39, the two most commonly used antigens for serodiagnosis of VL, detected the highest levels of antibodies in both humans and dogs with VL, whereas the recognition patterns of these antigens were distinct between the hosts. Among other defined antigens tested, LmSTI1 and CPB detected higher levels of antibodies in dogs and humans, respectively. These results indicate there is a difference between humans and dogs in antigen recognition patterns during VL. We infer that different strategies may need to be used in development of vaccines and diagnostics for humans and for dogs. In addition, we show a correlation between antibody titers to several antigens and severity of clinical symptoms during canine VL.     

Frequency and spectrum of mutations induced by radiations in some varieties of bread wheat

1. 1.
   The frequency and types of mutations induced by different dosages of X-rays, fast and thermal neutrons and beta particles from P³² and S³⁵ were studied in two fully awned (C. 591 and H. 167) and two awnless strains (N.P. 809 and H. 389) of bread wheat.     

Development of Strains with Yellow Seedcoat in Indian Mustard (Brassies juncea Czern. & Coss.)

A mutant with yellow seedcoat colour was isolated by Nayar (1968) in the mustard variety‘Rai-5′. This mutant was crossed to the national check cultivar ‘Varuna’ in order to develop improved strains with yellow seedcoat. Four such strains with yellow seeds were evaluated for their seed yield, yield components and percent oil. Two strains TM-9 and TM-17 were more productive than ‘Varuna’ in seed yield. All the yellow seeded strains showed higher oil percentage as compared to ‘Varuna’. The seedcoat in the yellow seeded strains accounts for 14-15% of the seed weight as compared to 18% in the black seeded ‘Varuna’. The higher proportion of the cotyledons and embryo accounts for the increased oil percentage in the yellow seeded types.     

Diversity analysis of sheep breeds from Southern peninsular and Eastern regions of India

Information is presented on the genetic diversity and relationship among six Indian sheep breeds/populations belonging to the Southern peninsular and Eastern agroecological zones, based on microsatellite markers. Parameters of genetic variation, viz., allele diversity, observed heterozygosity, gene diversity and population inbreeding estimates, were calculated for the six breeds. The allele diversity ranged from 6.40 to 7.92, whereas the gene diversity varied from 0.617 to 0.727. The highest allele and gene diversity was observed for Nellore sheep, while the lowest was exhibited by Garole breed. Within population inbreeding estimate (F _IS) revealed a significant deficit of heterozygotes in Deccani, Madgyal, Nellore and Garole, whereas Ganjam and Chhotanagpuri sheep showed an excess of heterozygotes. The contribution of each breed to the total diversity of the breeds was quantified by the Weitzman approach. The marginal loss of diversity incurred with removal of Nellore and Garole breeds was higher (>27%), whereas removal of Deccani breed resulted in lowest loss of diversity (3.84%) from the set. Estimation of the genetic differentiation (F _ST) and genetic distance (D _A) between the pairs of breeds revealed a close relationship between Deccani and Madgyal sheep (F _ST = 0.017; D _A = 0.080) and greatest demarcation between Madgyal and Garole breeds (F _ST = 0.110; D _A = 0.622). The information generated would help in shaping genetic management and conservation programs for the sheep breeds under consideration.     

Superior CMS (<Emphasis Type="Italic">Ogura</Emphasis>) lines with better combining ability improve yield and maturity in cauliflower (<Emphasis Type="Italic">Brassica oleracea</Emphasis> var. <Emphasis Type="Italic">botrytis</Emphasis>)

Three CMS lines, Ogu1A, Ogu2A and Ogu3A were selected among ten lines after BC₇ based on superior commercial, floral and seed setting traits. Introgression of sterile Ogura cytoplasm in cauliflower nuclear background reduced the flower size but did not affect commercial and seed setting traits drastically. Line × Tester analysis was done by taking these three CMS lines free from floral deformities as female parent with nine diverse lines of snowball cauliflower as tester. The parent Ogu2A exhibited highest GCA effect for curd yield (4.51) and harvest index (1.97) while Ogu1A exhibited highest GCA for earliness (−2.73). The parent, Ogu2A exhibited significant GCA for curd length (0.39) while, none of the CMS lines showed significant GCA for curd diameter and depth. Heterosis for curd yield was highest in the hybrid, Ogu2A × Kt-22 (63.5%) followed by Ogu1A × WF (36.9%) and Ogu1A × Kt-15 was the best hybrid for earliness followed by Ogu3A × Kt-22 with heterosis of −14.4% and −11.7%. However, the number of heterotic hybrids for yield and earliness was low indicating narrow genetic base of the snowball cauliflower.     

Bioenergetic considerations in cereal breeding for protein improvement

The bioenergetic implications of changing cereal grain protein concentrations and amino acid compositions by plant breeding are examined. It is shown that increased inputs of carbon assimilates and nitrogen are necessary when increasing protein concentration in cereal grains while maintaining high yields. Also, energetic requirements for obtaining endosperm proteins with a high lysine content in genotypes of maize and barley are slightly higher than in normal lysine stocks. The implications for plant breeding are discussed.     

Seed globulins of Cajanus cajan

Seed globulins ofCajanus cajan a widely cultivated legume were purified and characterised. About 78% of the seed proteins were salt soluble, out of which 61% were globulins which were further separated into three fractions. The fraction was insoluble at pH 4.7 and consisted of two subfractions. Fraction and were soluble at pH 4.7. All the fractions were characterised as glycoproteins by cesium chloride centrifugation. The proteins consisted of subunits which were not held together by covalent disulphide linkages. Amino acid analysis of the different globulin fractions showed that the fraction was comparatively rich in sulphur amino acids.     

Pattern of methane emission and water productivity under different methods of rice crop establishment

Methane (CH₄) emission and water productivity were estimated in an experiment conducted during wet (rainy) season of 2010 at the research farm of Indian Agricultural Research Institute, New Delhi, India. Treatments comprising three methods of crop establishment viz., conventional transplanting (CT), system of rice intensification (SRI) and double transplanting (DT) were laid out in randomized block design with four replications. Scented rice (Oryza sativa L) variety ‘Pusa Basmati 1401’ was transplanted in puddle field. In CT and SRI 21 and 12-day-old seedlings, respectively, were transplanted while in DT overall 45-day-old seedlings were transplanted. In CT and DT flooded conditions while in SRI saturated conditions were maintained. Results indicated that among the methods of crop establishment, CT had maximum cumulative CH₄ emission (32.33 kg ha^?1) followed by DT (29.30 kg ha^?1) and SRI (19.93 kg ha^?1). Temporal CH₄ flux fluctuated between 79.7 and 482.0 mg m^?2 day^?1 under CT; 46.0 and 315.0 mg m^?2 day^?1 in SRI and 86.7 and 467.3 mg m^?2 day^?1 in DT. Considerable temporal variations in the individual CH₄ fluxes were observed. Flux of CH₄ was generally higher in early stage of crop and peaked about 21 days after transplanting coinciding with tillering stage of crop. CH₄ flux declined gradually from 75 days after transplanting and stabilized at the harvest stage of rice in all the three methods of transplanting. Global warming potential was highest in CT (807.4 kg CO₂ ha^?1) and lowest in SRI (498.25 kg CO₂ ha^?1). However, a reverse trend was observed with carbon efficiency ratio. The water savings to the extent of six irrigations was recorded in SRI over CT. A saving of 27.4 % irrigation water and 18.5 % total water was recorded in SRI over CT while the corresponding values of DT over CT were 14.5 and 9.8 %. Water productivity of SRI (3.56 kg/ha mm) was significantly higher as compared to DT (2.87 kg/ha mm) and CT (2.61 kg/ha mm).     

Genotyping by sequencing of rice interspecific backcross inbred lines identifies QTLs for grain weight and grain length

Grain weight and grain length are the most stable components of rice yield and important indicators of consumer preference. Considering the potentials of wild rice and to enhance the rice yields to meet the increasing demands, 185 Backcross Inbred Lines (BILs) in the background of O. sativa ssp. indica cv. PR114, including 63 rufi-BILs derived from O. rufipogon IRGC104433 and 122 glumae-BILs from O. glumaepatula IRGC104387 were evaluated for mapping QTLs for yield and yield component traits using Genotyping by Sequencing (GBS). Phenotypic evaluation of BILs in three seasons spanning two locations revealed significant differences compared with recurrent parent. BILs which did not show significant differences for any trait under investigation, or similar based on pedigree, were excluded from GBS. Some glumae-BILs had to be excluded from mapping QTLs due to less sequence information. A custom designed approach for GBS data analysis identified 3322 informative SNPs in 55 rufi-BILs and 3437 informative SNPs in 79 glumae-BILs. QTL mapping identified one QTL for thousand grain weight (qtgw5.1), two for grain width (qgw5.1, qgw5.2) and one for grain length (qgl7.1) in rufi-BILs. In the glumae-BILs, three QTL for thousand grain weight (qtgw2.1, qtgw3.1, qtgw6.1) and two for grain length (qgl3.1, qgl7.1) were identified. Most of the grain weight and width QTL showed positive additive effect contributed by wild species allele, whereas the grain length QTL showed positive additive effect contributed by recurrent parent allele. Based on their physical position, none of the QTLs were found similar to previously cloned QTLs. QTLs for grain traits identified from low yielding wild relatives of rice reveals their significance in improving further the rice yields and widen the genetic base of cultivated rice.