Prediction of annual tree growth and survival for thinned and unthinned even-aged maritime pine stands in Portugal from data with different time measurement intervals

An annual individual tree survival and growth model was developed for pure even-aged stands of maritime pine in Portugal, using a large data set containing irregularly time-spaced measurements and considering thinning effects. The model is distance-independent and is based on a function for diameter growth, a function for height growth and a survival function. Two approaches are compared for modeling annual tree growth. The first approach directly estimates a future diameter or height using well-known growth functions formulated in difference form. The second approach estimates diameter or height using a function in differential form estimating the increment over a year period. In both approaches, the function parameters were related to tree and stand variables reflecting the competition status of the tree as well as of a thinning response factor. Variable growth and survival rates were assumed in the modeling approaches. An iterative method was used to continuously update tree and stand attributes using a cut-off to convert the survival probability for a living or a dead tree. The individual tree diameter growth model and the survival probability model were fitted simultaneously using seemingly unrelated regression (SUR). Parameters of the height function were obtained separately as the number of observations for height was much lower than the number of observations for diameter, which may affect the statistical inference and the estimation of contemporaneous cross-equation error correlation inherent to the system of equations. PRESS residuals were used to evaluate the predictive performance of the diameter and the height growth functions. Additional statistics based in the log likelihood function and also in the survival probability were computed to evaluate the survival function. The second modeling approach, which integrates components of growth expansion and decline, performed slightly better than the first approach. A variable accounting for the thinning response that was tested proved to be significant for predicting diameter growth, even if the model already included competition-related explanatory variables, namely the basal area of trees larger than the subject tree. However, this thinning response factor was not significant for predicting height growth.     

Does the application of silvicultural management models drive the growth and stem quality of sweet chestnut coppices towards sustainability?

New Forests - The coppice is a very flexible cultural system producing several calibers adapting to the demands of the market. Small-caliber roundwood from sweet chestnut (Castanea sativa Mill.)...     

Assessing seed desiccation responses of native trees in the Caribbean

New Forests - Native trees from the Caribbean were tested for seed desiccation responses, by adapting the “100-seed test” protocol. Ninety-seven seed lots of 91 species were collected...     

Genetic tracking of the brown bear in northern Pakistan and implications for conservation

Asian bears face major threats due to the impact of human activities as well as a critical lack of knowledge about their status, distribution and needs for survival. Once abundant in northern Pakistan, the Himalayan brown bear (Ursus arctos isabellinus) has been exterminated in most of its former distribution range. It presently occurs sparsely, in small populations, the Deosai National Park supporting the largest isolate. This decline might imply a reduction in genetic diversity, compromising the survival of the population. Using a combination of fecal DNA analysis and field data, our study aimed at assessing the size and genetic status of the Deosai population and give guidelines for its conservation and management. Using fecal genetic analysis, we estimated the population to be 40-50 bears, which compares well with the field census of 38 bears. The northern Pakistani brown bear population may have undergone an approximate 200-300-fold decrease during the last thousand years, probably due to glaciations and the influence of growing human population. However, in spite of the presence of a bottleneck genetic signature, the Deosai population has a moderate level of genetic diversity and is not at immediate risk of inbreeding depression. Gene flow might exist with adjacent populations. We recommend careful monitoring of this population in the future both with field observations and genetic analyses, including sampling of adjacent populations to assess incoming gene flow. The connectivity with adjacent populations in Pakistan and India will be of prime importance for the long-term survival of Deosai bears.     

Characterisation of agricultural drainage ditch sediments along the phosphorus transfer continuum in two contrasting headwater catchments

Purpose

This study investigated the phosphorus (P) source, mobilisation and transport potential of ditch bed sediments as well as surrounding field and bank soils in two agricultural headwater catchments with contrasting soil drainage capacities. This information is important for discerning the potential for ditches to attenuate or augment transfers of P from upstream sources and thus for developing appropriate management strategies for these features.

Materials and methods

Phosphorus sources were characterised using the Mehlich3-P, water-soluble P and total P tests. Phosphorus mobilisation potential was characterised using the Mehlich3-AL/P, Mehlich3-Ca/P and DESPRAL P tests. Phosphorus transport potential was characterised using data collected on the presence/absence of surface water in ditches during field surveys and downstream turbidity data.

Results and discussion

Ditch sediments had similar P source contents (Mehlich3-P, water-soluble P and total P) to the surrounding field soils and higher P contents than bank soils. However, calcium contents of sediments in the poorly drained catchment reflected the deep sub-soils rather than the surrounding field and bank soils. Mehlich3-Al/P and Mehlich3-Ca/P contents of ditch sediments in the well (non-calcareous) and poorly (calcareous) drained catchments respectively indicated potential for P retention (above thresholds of 11.7 and 74, respectively). However, sediments were less aggregated than field soils and may mobilise more particulate P (PP) during rain events. Nevertheless, the majority of surveyed ditches dried out from March to September 2011; thus, their potential to mobilise PP may be less important than their capacity to attenuate soluble and PP during this time.

Conclusions

In these and similar catchments, soluble P attenuation and particulate P mobilisation should be maximised and minimised, respectively, for example, by cleaning out the sediments before they become saturated with P and encouraging vegetation growth on ditch beds. This study also highlighted the influence of deep sub-soils on soluble P retention in ditches and thus the utility of characterising soils below depths normally included in soil classifications.

     

Responses of biomass and several photosynthetic indicators to manganese excess in triticale

Triticale (X Triticosecale, Wittmack) is generally accepted as a very rustic crop which can grow in difficult soils such as those with low pH, where aluminum (Al) and/or manganese (Mn) are frequently in excess. The first aim of the present work was to establish the parameters for the future evaluation of Mn excess tolerance. Plants were grown in pots with sand fed with a nutrient solution (pH 4.5) to which MnSO₄ .4H₂O was added. The biomass of plants (cv. Arabian) grown during one monm in a range of Mn concentrations (2,2.75,11, 16.5,22, 33, and 44 ppm) was determined in Experiment I. Subsequently a shorter range (10, 50, 100, and 200 ppm) was chosen and used with four cvs. (Arabian, Beagle, Borba, and TTE 9201) during the complete growth period (Experiment II). During this experiment the effects of Mn concentrations on the net photosynthetic rates, stomatal conductance, photosynthetic capacity, photochemical efficiency of PSII, quantum yield of photosynthetic non cyclic electron transport and leaf content of chlorophylls, and carotenoids in the several cvs. were studied. The final biomass and yield were taken as the ultimate criteria for ranking the cvs. It was concluded that 10 ppm Mn concentration was optimal for the growth and 50 ppm the lowest limit to produce toxicity which indicates that triticale was rather tolerant. All the physiological parameters determined after one month of growth and the performance of the photosystems were negatively affected by the Mn concentrations, but the changes were not sufficient to be used for an early (one month old plants) ranking of the cvs. consistent with the biomass and final grain yield. However, all the results agree that the cv. Arabian was the most sensitive because it suffered the strongest decreases and was affected by 50 ppm Mn concentration. The plants of the cv. TTE 9201 were the least affected as far as photosynthetic parameters are concerned.     

Development of two stable isotope dilution assays for the quantitation of acrolein in heat-processed fats

Two stable isotope dilution assays were developed for the quantitation of acrolein in fats and oils using [(13)C(3)]-acrolein as the internal standard. First, a direct GC-MS headspace method, followed by an indirect GC-MS method using derivatization with pentafluorophenyl hydrazine, was established. Analysis of six different types of oils varying in their pattern of fatty acids showed significant differences in the amounts of acrolein formed after heating at various temperatures and for various times. For example, after 24 h at 140 °C, coconut oil contained 6.7 mg/kg, whereas linseed oil was highest with 242.3 mg/kg. A comparison of the results showed that the extent of acrolein formation seemed to be correlated with the amount of linolenic acid in the oils. Although the acrolein concentrations were lowered in all six oils after frying of potato crisps, linseed and rapeseed oil still contained the highest amounts of acrolein after frying. By applying both methods on different thermally treated fats and oils, nearly identical quantitative data were obtained.     

Chemical characterization of the high molecular weight material extracted with hot water from green and roasted arabica coffee

The polysaccharides present in coffee infusions are known to contribute to the organoleptic characteristics of the drink, such as the creamy sensation perceived in the mouth known as "body", the release of aroma substances, and the stability of espresso coffee foam. To increase the knowledge about the origin, composition, and structure of the polysaccharide fraction, the high molecular weight material (HMWM) was extracted with hot water from two green and roasted ground arabica coffees: Costa Rica (wet processed) and Brazil (dry processed). The polysaccharides present in the green coffees HMWM were arabinogalactans (62%), galactomannans (24%), and glucans, and those found in roasted coffees were galactomannans (69%) and arabinogalactans (28%). The polysaccharides of the HMWM of the roasted coffees were less branched than those of the green coffees. The major green coffee proteins had molecular weights of 58 and 38 kDa, and the 58 kDa protein had two subunits, of 38 and 20 kDa, possibly linked by disulfide bonds. The protein fraction obtained from roasted coffees had only a defined band with < or =14 kDa and a diffuse band with >200 kDa. The majority of the galactomannans were precipitated with solutions of 50% ethanol, and the size-exclusion chromatography of the roasted fractions showed coelution of polysaccharides, proteins, phenolics, and brown compounds. The use of strong hydrogen and hydrophobic dissociation conditions allowed us to conclude that the phenolics and brown compounds were linked by covalent bonds to the polymeric material.     

Evaluation of Nitric Acid Extraction of Elements from Soils and Sediments in Two watersheds in East Tennessee

Determining the total elemental concentrations of soils requires a total dissolution method, in which hydrofluoric acid (HF) is commonly used. However, this method is tedious and risky due to the dangerous reagent HF. This study compared a single acid extraction technique using a nitric acid (HNO₃) extraction method to total dissolution (HF + microwave assisted aqua regia) for evaluating the total elemental concentrations in soils and sediments. The two methods were used to analyze the elemental content of soils and sediments from the Oostanaula Creek and Pond Creek watersheds in East Tennessee. Twenty-one elements (Al, Ba, Ca, Co, Cr, Cu, Fe, K, La, Li, Mg, Mn, Nd, P, S, Si, Sr, Ti, V, Zn, and Zr) were subsequently measured using inductively coupled plasma optical emission spectrometry (ICP-OES). The extraction efficiency for HNO₃ relative to the total was compared and discussed. In general, HNO₃ can extract the elements in absorbed phases and those residing in non-silicate minerals. Six elements (Ba, Co, Fe, Ca, Mn, and P) generated significant correlations between total and HNO₃ in both OC and PC watersheds. Finally, the elements were grouped according to the interrelationships of their total elemental concentrations based on the dendrogram plots, suggesting their geochemical association in soils and sediment forming minerals.