Identification of favorable alleles in the <Emphasis Type="Italic">non</Emphasis>-<Emphasis Type="Italic">yellow coloring 1</Emphasis> gene by association mapping in maize

Association mapping was conducted to explore favorable alleles of the chlorophyll-related non-yellow coloring 1 (NYC1) gene under light and dark using an association panel of 146 maize inbred lines. A total of 14 polymorphic sites were identified to be significantly associated with at least one of the chlorophyll-related traits at the seedling stage. Four single nucleotide polymorphisms (SNPs) (S320, S2951, S3901, and S3355) from the NYC1 gene were respectively strongly associated with chlorophyll b (chlb), the ratio of chlorophyll a to chlorophyll b (chl_ratio), chlorophyll a degradation (chla_deg), and total chlorophyll degradation (total_chl_deg). SNPs S320 (C/A) in exon 1, and S2951 (A/G) in intron 8 was related to chlb, with 6.01 and 8.89% of phenotypic variation under light treatment, respectively. Under dark treatment, SNP S3901 (C/T), located in 3′ untranslated region (3′UTR), was associated with chl_ratio, explaining 7.01% of the observed phenotypic variation, whereas SNP S3355 (C/G) in intron 9 explained 6.48 and 5.18% of phenotypic variations in chla_deg and total_chl_deg, respectively. Taken together, these results indicated that the NYC1 gene plays an important role in chlorophyll content and other related traits, and different sites act on chlorophyll metabolism under different light intensities in maize seedlings. Furthermore, these findings improve our understanding of the genetic basis of chlorophyll metabolism under different light conditions.     

Inheritance of race 1.2 Fusarium wilt resistance in four melon cultivars

The resistance to Fusarium oxysporum f.sp. melonis (Fom) race 1.2 has been studied in melons, such as the Portuguese accession ‘BG-5384’ and in the Japanese ‘Shiro Uri Okayama’, ‘Kogane Nashi Makuwa’, and ‘C-211’, since a good characterization of the resistance is necessary before its introgression into commercial varieties. These four melon accessions showed a high level of resistance to races 0, 1, and 2 of Fom, indicating that the partial resistance to the race 1.2 previously detected may not have been race specific. To determine the mode of inheritance of the resistance to Fom race 1.2, the F₁, F₂, BCP_R, and BCP_S generations from the crosses between the four resistant accessions above and ‘Piel de Sapo’, a Fom race 1.2 susceptible melon, were developed. They were subsequently inoculated with two Fom isolates, one from the pathotype 1.2Y and the other from the pathotype 1.2W. The area under the disease progress curve was determined for each inoculated plant, and the data were analyzed. We show that the resistance seen in these accessions is polygenically inherited with a complex genetic control because many epistatic interactions were detected. The three epistatic effects; additivity × additivity, dominance × dominance, and dominance × additivity are present and significant, with differing magnitudes from one cross to the next. The relatively low heritabilities, and these epistatic effects make difficult the improvement of the resistance, from these sources, through a standard selection procedure.     

Analysis of genetic diversity and population structure of confectionery sunflower (<Emphasis Type="Italic">Helianthus annuus</Emphasis> L.) native to Iran

Genetic diversity within and among 50 populations of confectionery sunflower (Helianthus annuus L.) collected from different geographical areas of Iran was evaluated by using microsatellite and retrotransposon markers. The number of alleles (Na) in SSR loci ranged from 2 to 3 with an average of 2.1. The polymorphic bands in retrotransposon markers ranged from 7 in locus CR-UR1 to 15 in locus CR-816 with a mean value of 11.33. Herarchical clustering of individuals (50 × 5 = 250) by neighbor joining method in DARwin5 software subdivided them into three groups. Using Bayesian method in the software pakage of Structure, the studied individuals were subdivided into two sub-populations. Principal coordinate analysis revelaed that the two first components explaine 7.86 and 6.16% of the total variance, respectively. Analysis of molecular variance revealed a higher level of genetic variation within (70%) than between (30%) populations. High molecular variation among individuals within population possibly is due to high allogamy nature of the sunflower plant. Low genetic variation observed between populations could be considered as a consequence of genetic equilibrium that has occurred over the long period of cultivation of confectionery sunflower in this area as well as seed exchange among regions. The traditional assumption that selecting genotypes of different geographical origin will maximize the diversity available to a breeding project does not hold in confectionery sunflower.     

Assessing Allelopathic Index for Estimating Allelopathic potential of Ajowan Extracts

Allelopathy is a procedure in which secondary metabolites are produced by plants. Some plants may beneficially or antagonistically affect other plants through allelochemical compounds which may be released directly or indirectly from live or dead parts and cause allelopathic and phytotoxic effects. The aim of the present study was to investigate the allelopathic possibility of ajowan (Carum copticum) extracts in different concentrations on morphological indices (germination and growth) of wheat (Triticum sativum), barley (Hurdeum vulgare), corn (Zea maize S.C 704), and safflower (Carthamus tinctorius L.) seedlings as proceeding crops and to develop a comprehensive formula for measuring the negative and positive effects of allelochemicals on growth indices such as shoot and root length, as well as the germination percentage on donor plants. It was demonstrated that increasing concentrations of ajowan extracts significantly decreased the Allelopathic Index, percent of germination, and other growth related indices of all seedlings. Based on the proposed Allelopathic Index of experimental plants, it was revealed that ajowan has posed a higher risk to corn and barley especially at the early stages of the growing cycle, while safflower and wheat indicated more tolerance to growth inhibition effects of ajowan in rotational sequence.     

Influence of High Shoot and Root-Zone Temperatures on Growth of Three Wheat Genotypes during Early Vegetative Stages

High temperatures, whether of shoot or root, are reported to affect shoot and root growth of various plant species. The scanty information available on the differential response of wheat genotypes to high shoot and root‐zone temperatures triggered this investigation to study the response and adaptation of shoot and root growth of three wheat genotypes to high shoot and root‐zone temperatures during early growth stages. Three wheat genotypes; Fang (heat tolerant), Siete Cerros (heat sensitive) and Imam (recent cultivar adapted to a hot irrigated environment) were grown in soil and hydroponically. Three shoot/root‐zone temperatures (23/23, 23/35 and 35/35 °C for the soil experiment and 22/22, 22/38 and 38/38 °C for the hydroponic experiment) were applied at three‐leaf growth stage. High root‐zone temperature alone or combined with high shoot temperature reduced xylem sap flow rate, root dry weight, root length and root/shoot ratio. Unexpectedly, shoot fresh and dry weights and relative growth rate (RGR) were not significantly affected by the high root‐zone temperature except for the susceptible genotype, Siete Cerros, after prolonged exposure in the hydroponic experiment. In contrast, high shoot/root‐zone temperature significantly reduced shoot fresh and dry weights from as early as the first week of the hydroponic experiment. The 38/38 °C treatment also caused significant reduction in RGR and net assimilation rate during the first 2 weeks, but no significant differences were found during the last 2 weeks compared with 22/22 °C. Interesting responses were observed among genotypes in terms of shoot and root dry weights and root/shoot ratio at 38/38 °C treatment. The heat‐sensitive Siete Cerros showed the least reduction in these traits during the first 2 weeks while the heat‐tolerant Fang and Imam responded by greatly reducing their shoot and root weights. The situation was almost reversed with the duration of treatments such that Siete Cerros became the most affected genotype while Fang and Imam were better adapted to high shoot/root‐zone temperature. Specific root weight was the exceptional trait that increased under high temperature treatments. Results indicate that despite the reduction in root length and weight observed under high root‐zone temperature, shoot growth was not much affected suggesting that the use of suitable cultivar coupled with proper management could alleviate most of high root‐zone temperature effects during early growth stages.     

Field evaluation and fiber analysis of transgenic cotton

We report the field evaluation of second generation of transgenic cotton expressing Bacillus thuringiensis (Bt) genes cry1Ac and cry2A under CaMV 35S promoter. Sixty-five transgenic lines were grown under RCBD design. Transgenic plants exhibited inherent ability to resist target insect (p < 0.05 and 0.01). Morphological studies showed significant reduction in plant height making them favorable for breeding. Yield was significantly increased for the transgenic lines. Fiber analysis showed improved gin turn out 40% for transgenic lines in comparison to 32% for non-transformed lines. Fibre quality of transgenic lines was not affected when compared with non transgenic lines. Inheritance pattern for transgenic lines suggests the need of further studies to understand the complex molecular mechanisms for resistance management and biosafety studies to develop new Bt cotton varieties.     

Identification of QTLs for rice grain size and shape of Iranian cultivars using SSR markers

Grain size is a main component of rice appearance quality. In this study, we performed the SSR mapping of quantitative trait loci (QTLs) controlling grain size (grain length and breadth) and shape (length/breadth ratio) using an F₂ population of a cross between two Iranian cultivars, Domsephid and Gerdeh, comprising of 192 individuals. A linkage map with 88 markers was constructed, which covered 1367.9 cM of the rice genome with an average distance of 18 cM between markers. Interval mapping procedure was used to identify the QTLs controlling three grain traits, and QTLs detected were further confirmed using composite interval mapping. A total of 11 intervals carrying 18 QTLs for three traits were identifed, that included five QTLs for grain length, seven QTLs for grain breadth, and six QTLs for grain shape. A major QTL for grain length was detected on chromosome 3, that explained 19.3% of the phenotypic variation. Two major QTLs for grain breadth were mapped on chromosomes 3 and 8, which explained 34.1% and 20% of the phenotypic variation, respectively. Another two major QTLs were identified for grain shape on chromosomes 3 and 8, which accounted for 27.1% and 20.5% of the phenotypic variance, respectively. The two QTLs that were mapped for grain shape coincided with the major QTLs detected for grain length and grain breadth. Intrestingly, gs2 QTL specific to grain shape was detected on chromosome 2 that explained 15% of the phenotypic variation.     

长枝木霉TICC鉴定及其生物学特性研究

从土壤中分离得到1株木霉T1CC,为明确其分类地位及其生物学特性,对该菌进行形态学鉴定和分子鉴定,并对其生长培养基、光照、温度、碳源、氮源、微量元素和pH等生物学特性进行研究.鉴定结果显示,该菌株为长枝木霉(Trichoderm longibrachiatum).生物学特性结果表明:菌株T1CC在PDA上生长量最大,查氏培养基和基本培养基上生长量最小;不同光照条件下,菌丝生长无明显差异,但在连续光照条件下可明显促进孢子产生;在15～40℃范围能够生长产孢,在35℃时菌丝生长最快,但产孢量在25～35℃最大;果糖最能促进菌丝生长,果糖、可溶性淀粉最有利于产孢;谷氨酸对菌丝生长和孢子产生都有促进作用;Cu最能促进菌丝生长,而zn、K和Mg则对菌丝生长有一定抑制作用,Cu最有利于产孢,zn对产孢明显抑制;在pH/值在2～10范围内均可生长,在pH为5时为生长最佳,在pH值3～7范围内最有利于产孢.