Individual heterogeneity in erythrocyte susceptibility to Babesia divergens is a critical factor for the outcome of experimental spleen-intact sheep infections

Susceptibility of sheep erythrocytes to Babesia divergens was investigated in vitro and a high inter-individual variability in their ability to support parasite population development was demonstrated, with some individuals having refractory red blood cells (RBC). As neither changes in growth conditions nor the use of different B. divergens strains influenced the level of susceptibility, the main factor postulated for this variability is the erythrocyte itself. Sheep therefore represent an excellent in vitro model to study the parasite-erythrocyte interaction. In addition, the existence of refractory RBC should help in the identification of the erythrocyte components required for B. divergens development. Experimental infections were carried out on spleen-intact sheep characterized by refractory or fully susceptible erythrocyte types. These differences translated into the successful infection of only those animals with susceptible erythrocytes: infected animals showed no clinical signs, but maintained an asymptomatic persistent infection, as usually observed in the natural bovine host. Sheep therefore represent model organisms that can allow us to study interactions between B. divergens and its vertebrate host at different levels of biological organisation, from the target cell to the intact animal, and represent an experimental infection model of concomitant immunity. Only a low percentage (13%) of the sheep population tested possessed susceptible erythrocytes and the potential role of sheep as a natural host or reservoir of B. divergens is discussed.     

Light-scattering study of the structure of aggregates and gels formed by heat-denatured whey protein isolate and beta-lactoglobulin at neutral pH

The structure of aggregates and gels formed by heat-denatured whey protein isolate (WPI) has been studied at pH 7 and different ionic strengths using light scattering and turbidimetry. The results were compared with those obtained for pure beta-lactoglobulin (beta-Lg). WPI aggregates were found to have the same self-similar structure as pure beta-Lg aggregates. WPI formed gels above a critical concentration that varied from close to 100 g/L in the absence of added salt to about 10 g/L at 0.2 M NaCl. At low ionic strength (<0.05 M NaCl) homogeneous transparent gels were formed, while at higher ionic strength the gels became turbid but had the same self-similar structure as reported earlier for pure beta-Lg. The length scale characterizing the heterogeneity of the gels increased exponentially with increasing NaCl concentration for both WPI and pure beta-Lg, but the increase was steeper for the former.     

Shifts in size,genetic structure and activity of the soil denitrifier community by nematode grazing

Bacterial-feeding nematodes represent an important driver of the soil microbial activity and diversity. This study aimed at characterizing the impact of nematode grazing on a model functional bacterial guild involved in N-cycling, the denitrifiers. Bacterial-feeding nematodes (Cephalobus pseudoparvus) were inoculated into soil microcosms whose indigenous nematofauna had previously been removed. The size, genetic structure and activity of the soil denitrifier community were characterized 15 and 45 days after nematodes inoculation using quantitative PCR of the nirK, nirS and nosZ denitrification genes, fingerprinting of the nirK and nirS genes and denitrification enzyme activity measurements, respectively. A significant impact of C. pseudoparvus was observed on genetic structure of the nirK community, mainly due to shifts in the relative abundance of the dominant populations, but not on the nirS community. The grazing pressure also tended to decrease the density of all denitrification genes as well as that of 16S rRNA genes. Despite being non-significant, the extent of this decline in gene copy numbers ranged between 60 and 80% of the control microcosm genes densities. Finally, compared to non-inoculated microcosms, denitrification activity significantly decreased by 8% in response to the nematodes inoculation. The herewith data showed that predation by a single species of bacterial-feeding nematode can affect the soil denitrifier community.     

A genome-wide association study identifies IL23R as an inflammatory bowel disease gene

The inflammatory bowel diseases Crohn's disease and ulcerative colitis are common, chronic disorders that cause abdominal pain, diarrhea, and gastrointestinal bleeding. To identify genetic factors that might contribute to these disorders, we performed a genome-wide association study. We found a highly significant association between Crohn's disease and the IL23R gene on chromosome 1p31, which encodes a subunit of the receptor for the proinflammatory cytokine interleukin-23. An uncommon coding variant (rs11209026, c.1142G>A, p.Arg381Gln) confers strong protection against Crohn's disease, and additional noncoding IL23R variants are independently associated. Replication studies confirmed IL23R associations in independent cohorts of patients with Crohn's disease or ulcerative colitis. These results and previous studies on the proinflammatory role of IL-23 prioritize this signaling pathway as a therapeutic target in inflammatory bowel disease.     

Effectiveness of quantitative resistance conferred by the genetic background of pepper in the control of root‐knot nematodes and influence onto durability of Me1‐ and Me3‐resistant genes in greenhouse conditions

In pepper (Capsicum annuum), the major genes (R‐genes) Me1 and Me3 confer resistance against root‐knot nematodes (Meloidogyne spp.). The combination of R‐genes and quantitative resistance factors in the same genotype is considered a good breeding strategy for increasing the durability of R‐genes. To ascertain this hypothesis, five pepper inbred lines, differing in their quantitative resistance level, were combined with Me1 or Me3 genes in F₁ hybrids. The resistance of inbred lines and F₁ hybrids was evaluated in a greenhouse with soil naturally infected by M. incognita in two successive growing years. In both years, lines carrying Me3 were less infected by the nematode when combined with quantitative resistance. An increase in nematode infection was observed in the second growing year in lines carrying Me1 or Me3, independently of quantitative resistance. The infection level recorded in inbred lines without R‐genes was similar in both years. The effectiveness of quantitative resistance controlling M. incognita is confirmed in greenhouse conditions, although the durability of Me1 and Me3 when combined with quantitative resistance factors was not seen to increase.     

Spatiotemporal patterns in seedling emergence and early growth of two oak species direct-seeded on abandoned pastureland

? Fine-scale spatial and temporal establishment patterns of direct-seeded oaks on abandoned agricultural land have been little studied despite their potential importance for long-term stand structure.

? Here we periodically monitored seedling emergence and early growth of bur oak (Quercus macrocarpa Michx.) and red oak (Q. rubra L.) on an abandoned pasture, and tested the effects of herbaceous competition, rodents, and soil physicochemical properties.

? Herbaceous competition slightly decreased diameter growth, but rodents had little impact on establishment. Red oak seedlings emerged earlier than bur oak and in a greater proportion (92% vs. 56%). Seedling emergence and early growth of both species showed significant spatial structures that were partly explained by variation in soil physicochemical properties. Bur oak was more responsive to microenvironmental heterogeneity than red oak, yet much of the variation in emergence and growth of both species remained unexplained.

? This suggests that other factors, such as acorn size or genetic variability, may exert equal or greater control than microenvironmental heterogeneity over seedling emergence and early growth of these two oak species on abandoned pastureland.

     

DNA methylation and histone acetylation: genotypic variations in hybrid poplars, impact of water deficit and relationships with productivity

? Several reports on annual plants have already shown the involvement of epigenetic modifiers such as DNA methylation in their adaptation to abiotic stresses.

? Nevertheless, the genotypic variations of epigenetic modifiers, their possible correlations with morphological traits and the impact of water deficit have not been described for perennial plants.

? Six genotypes of Populus deltoides × P. nigra were subjected or not to a moderate water deficit treatment. Various morphological traits such as the height of the plants, their biomass and the total leaf area were measured to characterize the productivity in both conditions. Levels of DNA methylation, histone acetylation and the activities and isoform accumulation of the corresponding enzymes were measured at the shoot apex, the site of morphogenesis. Genotypic variation was observed for the morphological traits and the epigenetic variables and correlations were established among them. Genotypic variation for DNA methylation was detected in hybrid poplars. A positive correlation was demonstrated between DNA methylation percentage and productivity under well watered conditions.

? While there was a general decrease of growth for all genotypes in response to a moderate water deficit, genotypic dependant variations of DNA methylation were found suggesting different strategies among hybrids.

     

Modeling recent bark stripping by red deer (Cervus elaphus) in South Belgium coniferous stands

? Context

Over the past few decades, the impact of large herbivorous ungulates on forest vegetation has been clearly highlighted. Among those impacts, bark stripping of coniferous trees is one of the most damaging. Bark stripping leads to rot development, inducing serious loss of timber value.

? Aims

The present study aimed firstly at evidencing the factors explaining the variations observed in fresh bark peeling rate for spruce and Douglas-fir in southern Belgium and secondly at identifying the key factors to consider when setting up a deer management plan.

? Method

Fresh bark peeling rate was recorded with a systematic sampling survey from 2004 to 2007. The covered territory was then divided into 63 distinct hunting zones of area ranging from 1,000 to 25,000 ha. About 5,000 plots were monitored annually. Each zone was characterized with a large number of explanatory variables. The explanatory variables were integrated firstly into fixed linear models using a stepwise procedure, and then into a mixed model.

? Results

The significant variables included in the model (R ²?=?44 %) are (by decreasing order of importance) red deer densities, proportion of coniferous stands and agricultural areas, snow cover, distance to urban habitats, and species diversity in the understory.

? Conclusion

The models revealed the impacts of several factors on bark peeling: deer density, deer-carrying capacity of the territory, landscape structure, and severity of winter conditions. The adjusted model allowed subtracting the impact of winter conditions in order to produce a relevant indicator for hunting management. In addition, the model was used to assess the sensitivity of a forested area to bark peeling based on its environmental characteristics.     

Growth of planted seedlings inside protective sleeves under strip openings of different widths in a post-agricultural forest

Many second growth forests have poor regeneration and in some spatial and economic context, such as post-agricultural forests, it may be beneficial to increase tree diversity. We planted seedlings of yellow birch (Betula alleghaniensis) and bur oak (Quercus macrocarpa) in strip openings of 3, 6 and 9 m width to control light. Individual mesh sleeves were used to reduce browsing pressure but they also reduced available light for seedlings: a large mesh and a small mesh sleeves were tested in each opening. Available light for seedlings ranged from 5 to 46% of full sunlight. First year growth was almost non-responsive to all treatments for both species, but birch showed strong responses during second year. Birches in the large mesh sleeve and the 9 m opening had the largest height and diameter increments, while those in the small mesh sleeve and the 3 m opening had the smallest increments. Small mesh sleeves increased the height over stem diameter ratio for both species. Treatments affected several other morphometric variables of birch but none of the oak. More time is needed to assert if bur oak can be a candidate species for enrichment planting. We recommend strip openings of 9 m width and large mesh sleeves, for protection against deer browsing, while controlling neighbouring competition, to promote artificial regeneration of hardwood species.     

Water loss regulation in mature Hevea brasiliensis: effects of intermittent drought in the rainy season and hydraulic regulation

Effects of soil and atmospheric drought on whole-tree transpiration (E(T)), leaf water potential (Ψ(L)) and whole-tree hydraulic conductance (K(T)) were investigated in mature rubber trees (Hevea brasiliensis, clone RRIM 600) during the full canopy stage in the rainy season in a drought-prone area of northeast Thailand. Under well-watered soil conditions, transpiration was tightly regulated in response to high evaporative demand, i.e., above reference evapotranspiration (ET(0)) ~2.2 mm day(-1) or maximum vapor pressure deficit ~1.8 kPa. When the trees experienced intermittent soil drought E(T) decreased sharply when relative extractable water in the top soil was?相似文献