Phoma stem canker (<Emphasis Type="Italic">Leptosphaeria maculans/L. biglobosa</Emphasis>) of oilseed rape (<Emphasis Type="Italic">Brassica napus</Emphasis>): is the G<Subscript>2</Subscript> Disease Index a good indicator of the distribution of observed canker severities?

Several disease indices (DI) have been proposed to assess the severity of phoma stem canker at late growth stages. The DI commonly used in France (called G₂ DI) consists of integrating the distribution of the proportions of plants observed within six canker severity classes into a single index. This index uses arbitrarily chosen coefficients associated to each class of canker severity. A given value of this DI can therefore be obtained with different distributions among the canker severity classes. Consequently, it is important to assess to what extent the G₂ DI is representative of the distribution of plants in canker severity classes. We show in this study that the G₂ DI is a good indicator of the distribution of the observed canker severities, using a dataset from different years, sites and cultivars; this illustrates the robustness of the G₂ DI.     

Salt-free dyeability of thiourea grafted cotton fabric

In this study salt-free dyeing cotton fabric was achieved by grafting thiourea to cotton fibers, where the thiourea grafted cotton fabric (TUGCF) was prepared by epoxidizing cotton fibers with epichlorohydrin in water and subsequently grafting in aqueous solution of thiourea. Fourier transform infrared spectra (FTIR) and XPS of the TUGCF indicated that a great amount of epoxy groups from the epoxidized cotton fibers reacted with amino groups from thiourea. The TUGCF fabric prepared at the optimum condition and subsequently dyed with reactive dyes in the absence of salt displayed significantly enhanced color strength, showing better dyeing properties when compared with the untreated cotton fabric dyed with conventional methods, in terms of washing fastness, rubbing fastness, and levelness. It was found that the dyeing performance of Reactive Red B-3BF followed a Langmuir-type adsorption curve when used to salt-free dye the TUGCF.     

Genetic diversity and population structure of worldwide eggplant (<Emphasis Type="Italic">Solanum melongena</Emphasis> L.) germplasm using SSR markers

Two hundred and eighty-seven worldwide eggplant accessions were examined for genetic diversity and population structure analysis with 45 SSR markers. The results resolved 242 alleles across all the accessions. Gene diversity ranged from 0.104 to 0.832 with an average of 0.558. Polymorphic information content ranged from 0.102 to 0.815 with an average of 0.507. The genetic diversity analysis classified all accessions into four groups, and the data showed that gene exchanges occurred in two groups during germplasm introduction, domestication, and improvement; however, the frequency was low. Population structure analysis classified 269 accessions into two subgroups, and the remaining 18 accessions were defined as admixed. The accessions from the same geographic origin tend to be clustered into same group. These results provide new insights into the exploitation of genetic diversity of germplasm for eggplant breeding program.     

Natural diversity of inflorescence architecture traces cryptic domestication genes in barley (<Emphasis Type="Italic">Hordeum vulgare</Emphasis> L.)

Many-grained mutants occurring spontaneously among their less well-endowed field mates may have appeared to early farmers as fortunate twists of fate foreboding wealth and abundance. In domesticated barley, the number of kernel rows in spike can be tripled by recessive mutant alleles at the Six-rowed spike 1 (vrs1) locus that abolish the suppression of lateral spikelet fertility. In another barley row-type, so called intermedium-spike (int), lateral floret size is often intermediate between six-and two-rowed types. Phenotypic and sequence analyses of our intermedium-spike collection revealed that other genes can increase the size of florets and even stimulate occasional grain setting in lateral spikelets. Here, we show that a complete six-rowed phenotype occurs in a diverse panel of intermedium-spike barley carrying wildtype Vrs1 in the presence of the Int-c.a allele of the intermedium spike-c (int-c) gene, previously considered only as a modifier of lateral spikelet fertility. Int-c.a-type alleles had arisen before domestication and are associated with the enlargement of lateral florets in wild barley, suggesting that natural selection/evolution acts towards reduced lateral floret size. Since Int-c.a cannot overcome the suppression of lateral florets in the genomic background of wild barleys, we infer the existence of other gene loci, at which novel alleles or allelic combinations were selected for after domestication, to increase grain number of barley independently of Vrs1.     

Management Zones Classified With Respect to Drought and Waterlogging

Within-field variations in potential grain yield may be due to variations in plant available soil water. Different water holding capacities affect yield differently in different years depending on weather. By estimating plant-water availability in different weathers, scenarios could be created of how yield potential and thereby fertilizer demand may vary within fields. To test this, measured cereal grain yields from a dry, a wet and an intermediate year were compared with different soil moisture related variables in a Swedish arable field consisting of clayey and sandy areas. Soil water budget calculations based on weather data and maximum plant available water (PAW), estimated from soil type and rooting data, were used to assess drought. A reasonable correlation between estimated and measured soil moisture was achieved. In the dry year, drought days explained differences in yield between the clayey and the sandy soil, but yield was better explained directly by maximum PAW, elevation, clay content and soil electrical conductivity (SEC). Yield correlated significantly with SEC and elevation within the sandy soil in the dry year and within the clayey soil in the wet year, probably due to water and nitrogen limitation respectively. Dense SEC, elevation and yield data were therefore used to divide the field into management zones representing different risk levels for drought and waterlogging. These could be used as a decision support tool for site-specific N fertilization, since both drought and waterlogging affect N fertilization demand.     

Quantification of organic carbon and primary nutrients in litter and soil in a foothill forest plantation of eastern Himalaya

The present study was an effort to understand the amount of litter fall and its subsequent decomposition and quantify the release of available nutrients and soil physicochemical characteristics in plantations of four forest tree species(Lagerstroemia parviflora, Tectona grandis, Shorea robusta and Michelia champaca) in the Chilapatta Reserve Forest of the Cooch Behar Wildlife Division in the Terai zone of West Bengal, India. The most litter(5.61 Mg ha~(-1))was produced by T. grandis plantation and the least(4.72 Mg ha~(-1)) by L. parviflora. The material turnover rate to the soil through decomposition from total litter was fastest during the first quarter of the year and subsequently decreased during the next two quarters. The material turnover rate was only 1 year, which indicates that more than90% of the total litter produced decomposed within a year.The available primary nutrient content in litter varied across the four plantations over the year. The plantations generally did not significantly influence the soil physical characteristics but did significantly influence the availability of primary nutrients and organic carbon at two depths(1–15 and16–30 cm) over the year. The availability of soil primary nutrients in the four plantations also increased gradually from the first quarter of the year to the third quarter and then decreased during the last quarter to the same level as in the first quarter of the year at both depths. The availability for soil organic carbon in the plantations followed a similar trend. The amount of litter produced and the material turnover in the soil in the different plantations differed, influencing the nutrient availability and organic carbon at the plantations. The amount of soil organic carbon was highest for T. grandis(2.52 Mg ha~(-1)) and lowest for L. parviflora(2.12 Mg ha~(-1)). Litter is the source of soil organic matter,and more the litter that is produced by the plantations, the higher will be the content and amount of soil organic carbon in the plantation.     

Pine wilt disease: a short review of worldwide research

This article summarizes the results of the research papers presented at the International Symposium on pine wilt disease (IUFRO Working Party Meeting 4.04.03) held in July 2009, at Nanjing, China. The general topics covered were on pine wilt disease (PWD), its causal organism, the pinewood nematode (PWN) Bursaphelenchus xylophilus, plus other PWN-associated microorganisms that play a significant role in PWD such as bacteria (e.g. Pseudomonas fluorescens). Most of the papers that are reviewed are based on work on PWD-PWN in East Asia and Russia. Specific topics covered include: 1) the fundamental conceptions of PWD development, 2) pathogenicity, 3) host-parasite relationships including the histopathology of diseased conifers and the role of toxins from bacteria-nematode ecto-symbionts, 4) PWN life cycle and transmission, 5) B. xylophilus dissemination models, 6) associations (with other nematodes), 7) diagnostics, 8) quarantine and control of the PWN and 9) biocontrol of the PWN.     

Risk factors associated with feline urolithiasis

Urinary tract diseases are among the main reasons for consultation in veterinary clinics and hospitals. It affects animals of any age, breed and gender. Among the diseases that affect this system, urolithiasis is the second largest cause of clinical signs compatible with feline urinary tract disease. The term urolithiasis refers to the presence of uroliths in any region of the urinary tract, but it is more commonly seen in the bladder and urethra. Uroliths are classified based on the type of mineral present in their composition, therefore, quantitative and qualitative analyzes are important for a better therapeutic approach. The animals may suffer from the disease and be asymptomatic, or show nonspecific clinical signs, making the diagnosis difficult. The disease should not be seen as a single problem, but as a consequence of various disorders. As dietary, metabolic, genetic and infectious causes, as well as factors that potentiate the chance of development of uroliths such as breed, age, sex, age range, obesity, sedentary lifestyle, geographic region and climate. Thus, the knowledge of the factors that influence the formation of uroliths, as well as the understanding of the pathophysiology, are key elements for better alternatives of therapy and prevention. The recognition of these factors helps to identify susceptible populations, minimizing exposure and increasing the protection factors, which facilitates the diagnosis and treatment of patients with urolithiasis. The objective of this paper is to present the main risk factors involved in the formation of urinary lithiasis in felines.     

Growth hormone attenuates branchial HSP70 expression in silver sea bream

In this study the effects of growth hormone (GH) on silver sea bream branchial heat-shock protein 70 (HSP70) expression was investigated using in-vivo and in-vitro experiments. For in-vivo experiments, sea bream were administered recombinant bream GH or the GH secretagogue hexarelin. Pituitary levels of GH were unchanged in fish administered exogenous GH but decreased on hexarelin administration, in comparison with saline controls. Levels of HSP70 were measured using immunoanalysis and it was found that both GH and hexarelin administration caused a significant decrease in branchial HSP70 abundance. For in-vitro analysis, branchial filaments were exposed to a range of GH concentrations (1, 10, and 100 ng/ml) and it was found that HSP70 levels were significantly lowered in all cases. This study adds to the growing body of evidence surrounding the importance of hormones in regulating heat-shock protein expression in fish.