The effect of random and density‐dependent variation in sampling efficiency on variance of abundance estimates from fishery surveys

Abundance indices (AIs) provide information on population abundance and trends over time, while AI variance (AIV) provides information on reliability or quality of the AI. AIV is an important output from surveys and is commonly used in formal assessments of survey quality, in survey comparison studies, and in stock assessments. However, uncertainty in AIV estimates is poorly understood and studies on the precision and bias in survey AIV estimates are lacking. Typically, AIV estimates are “design based” and are derived from sampling theory under some aspect of randomized samples. Inference on population density in these cases can be confounded by unaccounted process errors such as those due to variable sampling efficiency (q). Here, we simulated fish distribution and surveys to assess the effect of q and variance in q on design‐based estimates of AIV. Simulation results show that the bias and precision of AIV depend on the mean q and variance in q. We conclude that to fully evaluate the reliability of AI, both observation error and variability in q must be accounted for when estimating AIV. A decrease in mean q and an increase in the variance in q results in increased bias and decreased precision in survey AIV estimates. These effects are likely small in surveys with mean q ≥ 1. However, for surveys where q ≤ 0.5, these effects can be large. Regardless of the survey type, AIV estimates can be improved with knowledge of q and variance in q.     

Chromium(Ⅵ) Reduction in Wheat Rhizosphere

Reduction of Cr(Ⅵ) to Cr(Ⅲ) were studied in a fresh wheat rhizosphere soil (Kuroboku, high humic andosol) pretreated with a basal fertilizer consisting of (NH4)2SO4, P2O5 and KH2PO4 and with K2Cr2O7 by using a rhizobox system. It was found that rhizosphere exerted a positive effect on Cr(Ⅵ) reduction.Part of the reason was the decrease of pH in the rhizosphere due to application of (NH4)2SO4, implying that application of physiologically acid fertilizers would reduce Cr(Ⅵ) toxicity to plants.     

Gene constitution of South-East Asian native chickens, commercial chickens and jungle fowl using polymorphisms of four calpain genes

The gene constitution of polymorphisms of the four calpain genes (µ‐calpain, m‐calpain, p94, and µ/m‐calpain) were analyzed in South‐East Asian native chickens, White Leghorn and Broiler commercial chickens, and Red and Green jungle fowl. Polymorphisms were detected at all loci in chickens and Red jungle fowl, but only for CAPN1 (µ‐calpain gene) in Green jungle fowl. CAPN2 and CAPN1.5 are linked on chicken chromosome 3, and the genotype for these loci were treated as haplotype. Some combinations of calpain loci were tested using principal component analysis, and the best combination (CAPN1, CAPN3, and CAPN1.5) was determined. The proportion of polymorphic loci (P_poly) and heterozygosity (H?) were 1.00 and 0.316–0.465 in domestic chickens and red jungle fowl, and 0.33 and 0.137 in Green jungle fowl, respectively. G_ST values suggested that the degree of subdivision among native chickens was relatively low except for Thailand, which was highest. Pair‐wise F_ST testing, dendrogram and principal component analysis from the results of calpain loci showed that the four South‐East Asian native and commercial chicken populations were close genetically.     

叶片尾缘加弯板垂直轴风力机转矩特性数值模拟

文章提出一种在叶片尾缘加装弯板改善直线翼垂直轴风力机叶片周围流场,提高风力机转矩特性的方法。选取NACA0024和NACA0012两种直线翼垂直轴风力机常用翼型,利用数值模拟计算包括不加装弯板在内具有7种弯板长度2叶片直线翼垂直轴风力机输出转矩特性和静态起动转矩特性。结果表明,在NACA系列对称翼型尾缘加弯板叶片可在一定程度上改善直线翼垂直轴风力机输出转矩特性和静态起动特性。叶片尾缘加装弯板后可在某些旋转角下改变叶片上下表面压力分布,减少涡旋和流动分离产生,提高叶片气动特性,改善风力机转矩特性。研究发现,弯板长度为弦长40%风力机转矩特性改善效果最好,最大输出转矩系数较无弯板风力机提高17%,静态平均起动转矩提高26.4%。     

Detection of monoclonal integration of bovine leukemia virus proviral DNA as a malignant marker in two enzootic bovine leukosis cases with difficult clinical diagnosis

Monoclonal integration of bovine leukemia virus (BLV) proviral DNA into bovine genomes was detected in peripheral blood from two clinical cases of enzootic bovine leukosis (EBL) without enlargement of superficial lymph nodes. A BLV-specific probe hybridized with 1 to 3 EcoRI and HindIII fragments in these 2 atypical EBL cattle by Southern blotting and hybridization, as well as in 3 typical EBL cattle. The probe also hybridized to a large number of EcoRI and HindIII fragments in 5 cattle with persistent leukosis. These results suggest that the detection of monoclonal integration of BLV provirus into the host genome may serve as a marker of monoclonal proliferation and malignancy in difficult to diagnose EBL cattle.     

Tooth brushing inhibits oral bacteria in dogs

In this study, scaling, polishing and daily tooth brushing were performed in 20 beagle dogs, and the number of oral bacteria was determined using a bacterial counter. The dogs were randomized into the scaling (S), scaling + polishing (SP), scaling + tooth daily brushing (SB) and scaling + polishing + tooth daily brushing (SPB) groups. Samples were collected from the buccal surface of the maxillary fourth premolars of the dogs immediately after scaling and every week thereafter from weeks 1 to 8. Throughout the study, the number of bacteria was significantly lower in the SB and SPB groups compared with the S group. The findings suggest that daily tooth brushing inhibited oral bacterial growth in the dogs.     

The effect of estrogen on phosphorylation of prolactin in the mouse pituitary gland

Several studies have indicated that prolactin (PRL) assumes oligomeric, proteolytically cleaved, phosphorylated and glycosylated forms. Phosphorylated PRL (PPRL) is considered to be the most important posttranslationally modified form in the rat. In the present study, we examined whether or not PRL is present in the mouse pituitary gland in the phosphorylated form. Mouse pituitary PRL was digested with acid phosphatase, resolved by two-dimensional gel electrophoresis, stained with Coomassie brilliant blue, and then immunoblotted against the anti-PRL, anti-phosphoserine and anti-phosphothreonine antibodies. We also examined whether PRL is phosphorylated by protein kinases and semi-quantified the ratios of PPRL to PRL in the pituitary gland. The results indicated that three types of PRL are present in the pituitary glands of both male and female mice. One was non-phosphorylated (isoform 1), and the other two were immunoreactive to anti-phosphoserine (isoform 2) and/or anti-phosphothreonine (isoform 3) antibodies. The ratio between isoforms 2 and 1 of the 30-day-old female mice was higher than that of the 20-day-old female mice. However, the ratios among the three isoforms in the male pituitary glands did not differ with age. The ratio of PPRL to isoform 1 was obviously reduced after ovariectomy (OVX), and it recovered with estrogen replacement. These results suggest that estrogen influences PRL phosphorylation in female mice.     

Effect of ruminal dosing of mechanical stimulating brush on rumination time, ruminal passage rate and rumen fermentation status in Holstein steers fed a concentrate diet

This experiment was conducted to determine the effect of ruminal dosing of a mechanical stimulating brush on rumination time, ruminal passage rate and rumen fermentation status in steers fed a concentrate diet at maintenance level. Animals were dosed three Rumen Faibu (RF) per head through the rumen fistulae (RF treatment) and not dosed (control) in a change‐over design. The organic cell wall content of the concentrate diet was 12.7% of dry matter. Daily time spent on rumination was very short in both treatments with 24 min in RF treatment and 15 min in control. The turnover rate of ruminal fluid in RF treatment was higher than that in control. There were no differences in ruminal pH and total volatile fatty acid concentration between RF treatment and control. Acetic and butyric acid concentrations were not different between the treatments. Propionic acid concentration tended to be higher in the animals on RF treatment than in control animals. The RF dosing in Holstein steers fed a low fiber diet did not affect the rumination time, but increased rumen digesta passage rate and ruminal propionic acid production.