Characterization of seabird bycatch in eastern Canadian waters, 1998–2011, assessed from onboard fisheries observer data

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Field evaluation of the single intradermal cervical tuberculin test and the interferon-gamma assay for detection and eradication of bovine tuberculosis in Spain

A field comparison of the interferon-gamma (IFN-gamma) assay and the single intradermal cervical tuberculin (SICT) test for the diagnosis of bovine tuberculosis was conducted. A total of 1136 cattle belonging to 85 herds placed in 'Castilla y León' (northwestern Spain) were chosen, and 21 of these herds were subjected to the diagnostic assays two or three times at intervals of at least 4 months. All the animals positive to any of the tests were slaughtered and tuberculosis was confirmed by culture isolation method (CIM) and further identification by means of PCR. Only 10.6% of cattle reacted with the bovine PPD in the SICT test, a percentage that increased to 12.8% in the IFN-gamma assay. The sensitivity of the IFN-gamma assay compared to CIM was shown to be higher (84.9%) than that of the SICT test (80.2%), but the combination of both tests offered the highest sensitivity (92.9%). The number of false positive reactors (those animals in which CIM was negative) was considerably higher for the IFN-gamma assay than for the SICT test and, conversely, the number of false negative animals (M. bovis isolation but negative immunological result) was higher for the skin test than for the interferon assay. In the herds tested twice, tuberculosis was eradicated after the second cycle of testing in 50%, and in 75% after the third cycle in herds tested three times. The combination of these two techniques instead of separately seems, therefore, to be useful in eradication programmes against bovine tuberculosis.     

Comparison of different European rainbow trout populations under intensive production conditions

Growth and carcass quality of European rainbow trout populations were compared in a full sib family test over five experimental periods. In total, 131 full-sib families of 17 different populations, (i.e. 19 500 fish), were included. A special system for family testing in trout was developed. This consisted of separate hatching of single pair matings, separate rearing of families up to marketable size and common fattening under two stocking densities. Thus, growth was studied separately for the rearing and the fattening period. The observed differences in rearing and fattening weight between and within populations were quite distinct and of significance for production and breeding efficiency. Similar ranking of populations after fattening in different years and under different stocking densities indicated that the final weight was highly genetically controlled. Carcass characteristics determined at marketable size showed somewhat smaller differences between populations. Populations with the highest fattening weight did not generally produce the most valuable carcasses. The results are discussed with respect to their impact on breeding strategies.     

Fungal communities in bulk soil and stone compartments of different forest and soil types as revealed by a barcoding ITS rDNA and a functional laccase encoding gene marker

The soil fungal diversity and community partitioning between the bulk soil and stone compartments was investigated using PCR based approaches targeting the barcoding internal transcribed spacer (ITS) of rDNA and the laccase encoding functional gene as genetic markers. Soil samples were collected from the B-horizon of spruce and beech forests at the Hainich Biodiversity Exploratory, central Germany. The targeted markers were amplified from the respective DNA extracts using general fungal primers and basidiomycete laccase gene specific primers, cloned and sequenced. Differences in the fungal community composition between the two forest types and the soil compartments were indicated by both markers. When the effects of ecological factors were considered, the two markers produced different patterns of results. The ITS rDNA marker revealed communities principally influenced by forest type, while those detected with the functional marker were mainly affected by soil pH. The fungal communities detected by the functional marker in particular, differed significantly between soils and stones, indicating that laccase-producing fungi are specifically adapted to degrade organic matter in soils rather than weathering of stones. The study underlines the fact that coherent and complementary results may be obtained with both genetic markers used.     

Biodegradability of Disinfectants in Surface Waters from Buenos Aires: Isolation of an Indigenous Strain Able to Degrade and Detoxify Benzalkonium Chloride

Biodegradability of chlorhexidine (CH), triclosan (TC), and benzalkonium chloride (CBA) has been tested in 18 surface water sampling points in the urban area of Buenos Aires. Sampling points were located in both the Reconquista and the Matanza-Riachuelo basins as well as in the La Plata River. High tolerance to the three disinfectants was found and indigenous strains capable of degrading CBA and TC were isolated. Neither tolerance nor biodegradation were correlated with sewage pollution. A strain that degrades CBA was identified as belonging to the genus Pseudomonas using the API20NE system and 16SRNA sequencing. In batch assays, the strain was capable of degrading 100, 200, and up to 500 mg L^?1 of CBA in 10, 25, and 46 h respectively with specific growth rates (μ) of 0.56, 0.30, and 0.14 h^?1. The efficiency of the process was between 99.5–98.0% in terms of compound removal and between 93.8–89.1% in terms of chemical oxygen demand (COD). The detoxification of the compound as a result of the biodegradation was assessed using Pseudokirchneriella subcapitata, Vibrio fischeri, and Lactuca sativa as test organisms.     

Cross-sectional study on acrylamide hemoglobin adducts in subpopulations from the European Prospective Investigation into Cancer and Nutrition (EPIC) Study

Acrylamide exposure was investigated in subgroups of the EPIC study population (510 subjects from 9 European countries, randomly selected and stratified by age, gender, and smoking status) using hemoglobin adducts of acrylamide (HbAA) and its primary metabolite glycidamide (HbGA). Blood samples were analyzed for HbAA and HbGA by HPLC/MS/MS. Statistical models for HbAA and HbGA were developed including body mass index (BMI), educational level, and physical activity. A large variability in acrylamide exposure and metabolism between individuals and country groups was observed with HbAA and HbGA values ranging between 15-623 and 8-377 pmol/g of Hb, respectively. Both adducts differed significantly by country, sex, and smoking status. HbGA values were significantly lower in high alcohol consumers than in moderate consumers. With increasing BMI, HbGA in nonsmokers and HbAA in smokers decreased significantly. In the assessment of potential health effects related to acrylamide exposure, country of origin, BMI, alcohol consumption, sex, and smoking status should be considered.     

Comparison of Climate Change Effects on Pome And Stone Fruit Phenology Between Balkan Countries and Bonn/Germany

The objective of the joint project between the two universities of Bonn and Sarajevo was to study the effects of climate change associated with warmer winter and spring temperatures on fruit tree phenology. Changes in flowering date of apple and cherry were correlated with local weather data obtained concomitantly on-site at four locations in the Balkan countries Slovenia, Serbia, B & H and at Bonn, Germany.Phenological data of flower opening (F1; BBCH 61) of apple cv. ‘Golden Delicious’ originated from 55 years at Cacak (44?°N, Serbia) and at Klein-Altendorf, University of Bonn (50?°N), cv. ‘Bobovec’ from the University of Ljubljana (46?°N, Slovenia) and cherry cv. ‘Burlat’ (35 years at Klein-Altendorf, 50?°N) and 20–30 years at Tuzla (44?°N, B & H) and Mostar (43?°N, Bosnia & Herzegovina; B & H).The annual precipitation showed a negligible change in the last 55 years of ±5% in the Balkan countries (e.?g. Cacak, 699?mm), but only ±1.8% at Klein-Altendorf (605?mm) with a slight shift to more winter rainfall.Regression analysis showed an increase in mean temperature of 1.7?°C (annual) and 1.45?°C for the vegetation period at Klein-Altendorf (last 55 years), Germany. In the evaluated Balkan stations, the greatest increase in annual air temperature between two climate phases (until 1987 versus from 1988 until now) was at Ljubljana (1.4?°C) and Cacak (1.2?°C) in contrast to the least increase (0.3?°C) at Tuzla (annual average 10?°C) and an intermediate value (0.9?°C) in the warmer Mostar (annual average 14.5?°C).This recent temperature increase advanced flower opening by 10–14 days for apple such as cv. ‘Golden Delicious’ at Cacak and 7–10 days (last 55 years) at Bonn and 4–5 days (last 35 years) for the early cherry cv. ‘Burlat’ at Klein-Altendorf/Bonn; at Mostar and Tuzla, the effect of climate change was greater with the early cherry cv. ‘Burlat’ (26 days) compared with the difference of the late cherry cultivar (16 days). Before recent climate change (1973–1987), cherry flower was advanced by 10 days in the warmer med climate at Mostar but delayed by 16 days in the cooler Tuzla. The results, i.?e. the flower advancement in the Continental climate but flower delay in the med climate, are discussed with respect to the risk of late frost and countermeasures to combat climate change effects.     

Genetics of resistance in <Emphasis Type="Italic">Luffa cylindrica</Emphasis> Roem. against <Emphasis Type="Italic">Tomato leaf curl New Delhi virus</Emphasis>

Sponge gourd is a popular vegetable grown throughout India. Tomato leaf curl New Delhi virus, the causal virus of tomato leaf curl disease, has recently been reported to be associated with sponge gourd, causing up to 100% crop loss under epidemic conditions. We have collected 30 genotypically diverse genotypes of sponge gourd from different parts of India, screened these for resistance under natural epiphytotic conditions, and then confirmed the results through challenge inoculation with a purified strain of the virus under insect-proof greenhouse conditions. The minimum vulnerability index was recorded in genotype DSG-6 (3.33), followed by DSG 7 (6.0) under the challenge (whitefly-populated) inoculation conditions. Two susceptible genotypes (‘Pusa Sneha’ and NSG-1-11), both possessing desirable fruit characters, were crossed with the two most promising resistant lines (DSG-6 and DSG-7) and the disease reaction of segregating and backcross generations studied through challenge inoculation with a purified strain of virus under insect-proof greenhouse conditions. A chi-square (χ²) test of frequency distribution based on the vulnerability index of the F₂ progenies of the two resistant × susceptible crosses revealed monogenic dominant Mendelian ratio 3(R):1(S) to be the best fit in all crosses. This monogenic dominant model was further confirmed by the 1(R):1(S) ratio found to be best fit for the test cross with the susceptible parent. These results reveal that resistance to Tomato leaf curl New Delhi virus associated with yellow mosaic disease of sponge gourd is controlled by a single dominant gene in the genetic background of the resistant parents (DSG-6 and DSG-7) and that these two lines can be effectively utilized for the development of high-yielding and yellow mosaic disease-resistant varieties/hybrids of sponge gourd. This is the first conclusive identification of a resistant source and the inheritance of resistance against Tomato leaf curl New Delhi virus in sponge gourd.     

Influence of compost of sewage sludge and low-quality water on pesticide uptake by tomato plants grown in an iron mine soil

Purpose

In mine soils, especially from arid or semiarid areas, the use of low-quality water for irrigation is a usual practice. Therefore to fill this gap, different experiments have been carried out to evaluate the effect of compost, pesticide and wastewater on the growth of tomato plants in a mine soil located at an iron extraction area.

Materials and methods

Soils proceeded from Alquife mine wastes whose most outstanding characteristics are alkaline conditions, low organic matter and electrical conductivity and high As concentration. The compost of sewage sludge (CSL) used to amend this soil had a slightly acid pH (6.8), EC 3.0?±?0.07 dS m^-1 (1/10 ratio, m/V) and 10 % organic carbon (OC) content. Irrigation was performed with distilled water (DW) or wastewater (WW) and two pesticides, the insecticide thiacloprid and the fungicide fenarimol, were applied to the soil. Tomato was grown directly from seeds on each pot. Four treatments with addition of pesticides were considered. For comparison purposes, two additional treatments without pesticides were also included.

Results and discussion

Addition of compost of sewage sludge led to a significant and sustained increase of soil OC content and dehydrogenase activity, while irrigation with wastewater had a slight or negligible effect on both properties. The plant species responded negatively to wastewater irrigation when this practice was undertaken with the application of both pesticides. No detectable amounts of thiacloprid, a relatively unstable and polar insecticide, were found in soil. The concentration of fenarimol in soil was higher after amendment with compost, but was not modified by irrigation with wastewater. In tomato shoots, the amounts of both pesticides were inversely correlated with final soil organic carbon, indicating that this soil property is relevant for their plant uptake. Besides, fenarimol concentrations in the soil and the tomato shoots were inversely related (r?=??0.836).

Conclusions

Tomato was not able to grow healthy in Alquife mine soil without compost addition. The irrigation with wastewater only reduced plant growth when used in combination with pesticides. Uptake of both pesticides by tomato plants was negligible according to the low bioaccumulation factor values, but was almost doubled for wastewater irrigation. Caution should be taken with the use of treated wastewater, because it may reduce plant growth in tomato that is a species sensitive to salinity.