Genetic diversity of apricot revealed by a set of SSR markers from linkage group G1

Eight polymorphic simple sequence repeat (SSR) markers located in the G1 linkage group of apricot (Prunus armeniaca L.) were previously developed and evaluated in a small set of cultivars. Those primers were used for studying variability in 77 apricot cultivars belonging to five different geographical groups, such as Chinese, Asian (Irano-Caucasian and Central Asian), North American, Mediterranean and Western European as well as Middle European cultivars. Six of the markers were polymorphic and revealed a total of 71 alleles ranging from 5 (aprigms11) to 20 (aprigms1) alleles per locus with a mean value of 11.83 alleles per locus. In conclusion, the SSR loci located in the G1 linkage group show a level of polymorphism which is similar to loci dispersed throughout the entire genome. The total number of alleles and the number of unique alleles were the highest in Chinese apricots and the lowest in Middle European cultivars. Heterozygosity also showed a decrease from Asia and China to Middle Europe. No association could have been observed between any SSR markers tested and plum pox virus (PPV) resistant phenotype of cultivars. PPV resistant cultivars did not form a separate clade on the dendrogram obtained by UPGMA cluster analysis. Middle European and Chinese cultivars formed separate clusters while other genotypes formed smaller multiple sub-groups or scattered among different clusters. Our results support previous hypotheses on the origin of PPV resistance in North American apricots. The allele data was also presented in a form that allowed the easy observation of allele frequencies in each geographical group at each locus. Using this data field, differences and similarities between cultivar groups can be easily assessed. The analysis demonstrated the links between the North American and Mediterranean apricot germplasm and confirmed that the Chinese and Eastern European cultivars are distantly related.     

Rearing of coregonid fishes (Coregonidae) in illuminated lake cages: IV. Gonad development in whitefish (Coregonus lavaretus L.) under conditions of cage culture

The paper presents the results of observations on gonad development in whitefish (Coregonus lavaretus L.) in the fourth year of culture in illuminated like cages. Whitefish ovaries attained stage III of maturity. Stage IV of maturity was attained by only a few individual females. Disturbances in the development of the ovary were observed, consisting of asynchronous growth of the oocytes, their partial resorption, and delayed trophoplasmatic growth. Development of male gonads was also disturbed. Different males matured at different times, and their testes were in different stages of maturity. Fishes did not attain sexual maturity by the end of the fourth year of cage culture, so that no spawning could have taken place.     

Seminal plasma proteins of Atlantic halibut (Hippoglossus hippoglossus L.)

Protein content and properties in the seminal plasma of Atlantic halibut (Hippoglossus hippoglossus) were assayed using spectrophotometric and electrophoretic methods. The protein concentration ranged from 6.4 ± 3.1 to 19.4 ± 3.4 mg ml⁻¹ and anti-proteolytic activity from 585.2 ± 104.6 to 2912.4 ± 367.4 U l^−l. A high correlation between anti-proteolytic activity and protein concentration (r = 0.95), and between sperm concentration and osmolality was found (r = 0.92). There was a significant decrease in anti-proteolytic activity from the first to the second sampling, but not in protein concentration. Anti-proteolytic activity and protein concentration were significantly affected by variations in individual males. Electrophoresis revealed four anti-proteolytic bands and individual differences in bands of proteolytic activity, which were subsequently characterized as metalloproteases and serine proteases.     

Forest recovery in set-aside windthrow is facilitated by fast growth of advance regeneration

Key message

The disturbance of a research plot by a windstorm allowed us to study the role of the seedling bank in the regeneration processes. The released advance regeneration dominated among the saplings; taller individuals retained their position until the end of the study. Pioneer species occurred sporadically. Seven years after the disturbance, the windthrow was covered by a dense thicket of young trees.

Context

The dominant role played by advance regeneration in natural regeneration processes after intense wind disturbances is still a matter of dispute.

Aims

We took advantage of a windstorm in one of our research plots to study the role of the seedling bank released by the disturbance in the regeneration processes.

Methods

We collected data in 70 plots, recording the survivorship of seedlings, annual height growth, and signs of browsing. The height ranking was analyzed with Kendall’s concordance coefficient, and the height growth rates were compared using Dunn’s test.

Results

The density of seedlings increased from 6.7/m² in 2008 to 8.1/m² in 2010 and then decreased to 1.2/m² in 2015. The density of saplings increased continuously from 0.14 to 1.9/m². The highest size differentiation occurred in sycamore maple; the individuals which were taller before the windstorm retained their position until the year 2015. The only species that was recruited mainly from germinants was European hornbeam.

Conclusion

The advance regeneration released by the windstorm played a major role in the regeneration process, while pioneer species occurred only sporadically. Seven years after the disturbance, the windthrow was already covered by a dense thicket of young trees.

     

The importance of the riparian ecotone and river hydraulics for sustainable basin-scale restoration scenarios

1. The effect of riparian ecotone functional complexity and stream hydraulics on an upland river ecosystem has been analysed. 2. The amount of nutrients retained by bottom sediment was lowest on a sandy substrate (range: 26–104 mg m⁻² P-PO₄) and highest in wetland bays (range: 558–5368 mg m⁻² P-PO₄). A stream bed covered by Berula erecta had about three times higher retentive nutrient capacity ( x̄ = 584 mg m⁻² day⁻¹) than did a sandy substrate( x̄ = 205 mg m⁻² day⁻¹). 3. The amount of allochthonous organic matter (CPOM) deposited on the stream bed decreased with current velocity. The trophic potential of CPOM, measured as total protein, was significantly correlated with the amount of deposited CPOM (r = 0.863; p<0.00001) and depended on stream order. 4. Both invertebrate and fish biomass in the upland river were significantly correlated with calcium/bicarbonate (benthos: r = 0.858; p<0.006; fish: r = 0.918; p<0.001). 5. Fish biomass, diversity and species richness were highest in pools, lower in riffles and lowest in the run/transition zone. 6. Macroinvertebrate biomass was highest at an intermediate riparian ecotone complexity with an adequate supply of organic matter and incident light. Fish biomass followed the same trend, being lowest in heavily shaded areas and in open channels without riparian vegetation (range: 1–4.5 g m⁻²), but highest in ecotones of intermediate complexity (range: 1.6–92.8 g m⁻²). The ‘cascading effect’ of invertebrate density depletion, which was inversely related to fish biomass, was observed seasonally. 7. The above results indicate that riparian ecotone structure and the heterogeneity of the stream channel may regulate biodiversity, productivity and nutrient retention in the fluvial corridor. These quantitative data help to create alternative scenarios for sustainable river basin management. © 1998 John Wiley & Sons, Ltd.     

A physical map of the 1-gigabase bread wheat chromosome 3B

As the staple food for 35% of the world's population, wheat is one of the most important crop species. To date, sequence-based tools to accelerate wheat improvement are lacking. As part of the international effort to sequence the 17-billion-base-pair hexaploid bread wheat genome (2n = 6x = 42 chromosomes), we constructed a bacterial artificial chromosome (BAC)-based integrated physical map of the largest chromosome, 3B, that alone is 995 megabases. A chromosome-specific BAC library was used to assemble 82% of the chromosome into 1036 contigs that were anchored with 1443 molecular markers, providing a major resource for genetic and genomic studies. This physical map establishes a template for the remaining wheat chromosomes and demonstrates the feasibility of constructing physical maps in large, complex, polyploid genomes with a chromosome-based approach.     

Bound amino acids in humic acids from arable cropping systems

We investigated the varying concentrations of bound amino acids in humic acids (HA) extracted from soils under both crop rotation and continuous cropping of rye. The experiment was created in 1957. Since then, winter rye had been grown continuously and also the sequence of the 7 yr rotation had been started: potato, spring barley, alfalfa, alfalfa, oil seed rape, winter rye, and winter rye. Soils were fertilized with NPK and manure. Continuous cropping of rye increased total acidity of soils and the contents of carboxylic and phenolic groups in HA. The total amounts of the bound amino acids in HA from soils under crop rotation were higher than from continuous cropping of rye. Fertilization with NPK increased the contents of bound amino acids more than manure. Neutral amino acids dominated in all samples of HA, and basic amino acids had the lowest concentrations. In both types of cultivation, glutamic acids, glycine, alanine, valine, and lysine dominated. The proline contents in HA from continuous rye cropping were higher than in HA from soils under crop rotation. The concentrations of β‐alanine and lysine were higher in HA from crop rotation indicating a higher microbial biomass since these compounds are typical constituents of bacteria cell walls.     

Mercury content and its bioconcentration factors in wild mushrooms at Łukta and Morag,northeastern Poland

Total concentrations of mercury were determined using cold-vapor atomic absorption spectroscopy (CV-AAS) in the fruiting bodies of 16 species of wild mushrooms and underlying soil (0-10 cm) substrates collected in the areas of the Communes of Morag and ?ukta in the county of Ostróda in northeastern Poland in 1997-1998. A total of 174 composite samples of caps, 174 stalks, 80 whole fruiting bodies (collectively 1254 specimens), and 252 soils were examined. Among several species of mushrooms analyzed, the greatest concentrations were between 1300 and 71000 ng.g(-1) of dry matter. These levels were found in the caps of Sweating mushroom (Clitocybe rivulosa), King Bolete (Boletus edulis), and Common Puffball (Lycoperdon perlatum) and also were characterized by the highest bioconcentration factors (BCF) for Hg, which ranged between 160 +/- 82 and 110 +/- 34. The cap to stalk quotient for mercury concentrations was approximately 2 for most of the species except Poison Pax (Paxilus involutus), which had a greater concentration in caps than in stalks and a quotient of 4.4 +/- 7.2. Hg concentrations in the underlying soil substrates (0-10 cm layer) ranged between 21 +/- 21 and 390 +/- 130 ng.g(-1) of dry matter. The results showed that the consumption of mushrooms, considered to be the sole dietary source of mercury at the highest or mean element concentrations found, is not hazardous at daily ingestion rates of less than 70 and 210 g of fresh product, which would result in a hazard index value of less than unity.     

Androgenic capability among genotypes of winter and spring barley

Variable efficiency of androgenesis remains a serious problem in many species of cereals. It is still unclear what makes certain genotypes more amenable to androgenesis than others. This study was undertaken to quantify the previously suspected advantage of winter barley genotypes over spring ones with regard to regeneration efficiency in anther culture. The material consisted of 40 barley hybrids originating from Polish breeding companies. The number of androgenic structures per 100 anthers did not differ significantly between analysed groups (119 vs. 152 non‐significant), but the average regeneration of green plants per 100 anthers was five times higher in winter genotypes (6.4 vs. 1.3). The incidence of albinism was lower for the winter than for the spring materials (70% vs. 90%), while the rate of spontaneous chromosome doubling was similar in both groups (58% vs. 56%). The results strongly support the notion that winter genotypes are more amenable to androgenesis and this may be a consequence of their better adaptation to stress conditions.     

Rearing of coregonid fishes (Coregonidae) in illuminated lake cages: I. Growth and survival of Coregonus lavaretus L. and Coregonus peled Gmel.

The paper presents the results of rearing whitefish (Coregonus lavaretus L.) and peled (Coregonus peled Gmel.) in illuminated lake cages during a period of 4 years. In 3 successive years about 97 kg of summer coregonid fry were produced during initial 2-month rearing. Whitefish fry reached a length of 30.0–49.5 mm and an average individual weight of 201 mg–1 g. Peled fry reached 31.0–38.3 mm in length and 300–370 mg in weight. Whitefish survival rates amounted successively to 72.6% in 1977, 51.4% in 1978, and 3.1% in 1979. Survival rates for peled were 57.8%, 63.1% and 6%, respectively. Fishes at the age of 1+ and 2+ years showed high mortalities. Their growth rate was slower than in wild populations, and they did not attain sexual maturity.