Results from an indirect fluorescent antibody test using three different strains of Ehrlichia canis

An indirect fluorescent antibody (IFA) test is usually performed to detect antibodies in dogs naturally infected by Ehrlichia canis. In this work, results obtained using three different E. canis strains as antigen (a commercial antigen, the E. canis Oklahoma strain and the E. canis Madrid strain) were compared. One hundred and forty-nine serum samples obtained from dogs living in the centre of Spain were analysed. When qualitative results were evaluated, identical results were detected in 87.2% of samples for the three antigens tested. When comparing antibody titre results, differences between the Madrid strain and the commercial antigen, and between the Madrid and Oklahoma strains were statistically significant (P < 0.0001). No differences were found when comparing the Oklahoma strain with the commercial antigen (P = 0.562). Subtle intra-laboratory variations shown in this study suggest a higher sensitivity of the IFA test when an autochthonous strain is used as antigen.     

Linkage disequilibrium and effective population size in Gir cattle selected for yearling weight

Linkage disequilibrium (LD) plays an important role in genomic selection and mapping of quantitative trait loci (QTL). This study investigated the pattern of LD and effective population size (N_e) in Gir cattle selected for yearling weight. For this purpose, 173 animals with imputed genotypes (from 18 animals genotyped with the Illumina BovineHD BeadChip and 155 animals genotyped with the Bovine LDv4 panel) were analysed. The LD was evaluated at distances of 25–50 kb, 50–100 kb, 100–500 kb and 0.5–1 Mb. The N_e was estimated based on 5 past generations. The r² values (a measure of LD) were, respectively, .35, .29, .18 and .032 for the distances evaluated. The LD estimates decreased with increasing distance of SNP pairs and LD persisted up to a distance of 100 kb (r² = .29). The N_e was greater in generations 4 and 5 (24 and 30 animals, respectively) and declined drastically after the last generation (12 animals). The results showed high levels of LD and low N_e, which were probably due to the loss of genetic variability as a consequence of the structure of the Gir population studied.     

Osteomalacia as a result of phosphorus deficiency in beef cattle grazing subtropical native pastures in Uruguay

We investigated 2 outbreaks of osteomalacia as a result of phosphorus (P) deficiency in herds of lactating beef cows grazing subtropical native pastures in Uruguay. Cows exhibited pica, difficulty to stand and walk, rib fractures, and body weight loss even with adequate forage availability. Osteopenia and severe osteomalacia were observed on gross and histologic examination. The concentrations of bicarbonate-extractable P in soil (4.0, 4.1 mg P/kg), total P in pasture (0.9, 1.1 g P/kg), inorganic P in serum (1.0, 0.71 mmol P/L), and P in bone (73 mg P/mL) were all low. Although injectable and mineral salt supplements provided additional P in both outbreaks, these supplementary amounts were insufficient to prevent P deficiency. The P ingested by the cows from the pasture and supplements would have provided 20–55% of their daily P requirements of ~21 g P/d. Osteomalacia occurred in cattle at the 2 ranches as a result of severe P deficiency in the soil and forage, and inadequate P supplementation. Following diagnosis, control of P deficiency in beef cattle requires estimation of the amount of pasture P ingested and provision of sufficient additional supplementary P to meet the animals’ requirements.     

Ecosystem services from coffee agroforestry in Central America: estimation using the CAF2021 model

The goal of sustainable coffee production requires multiple functions from agroforestry systems. Many are difficult to quantify and data are lacking, hampering the choice of shade tree species and agronomic management. Process-based modelling may help quantify ecosystem services and disservices. We introduce and apply coffee agroforestry model CAF2021 (https://doi.org/10.5281/zenodo.5862195). The model allows for complex systems with up to three shade tree species. It simulates coffee yield, timber and fruit production by shade trees, soil loss in erosion, C-sequestration, N-fixation, -emission and -leaching. To calibrate the model, we used multivariate data from 32 different treatments applied in two long-term coffee agroforestry experiments in Costa Rica and Nicaragua. Without any further calibration, the model was then applied to agroforestry systems on 89 farms in Costa Rica and 79 in Guatemala where yields had been reported previously in farmer interviews. Despite wide variation in environmental and agronomic conditions, the model explained 36% of yield variation in Costa Rica but only 15% in Guatemala. Model analysis quantified trade-offs between yield and other ecosystem services as a function of fertilisation and shading.

     

Arbuscular mycorrhizas and performance of Polylepis australis trees in relation to livestock density

Polylepis australis trees endemic to Argentina dominate the canopy of subtropical high altitude forests. Here, livestock rearing is the main economic activity and is suspect of the low performance of P. australis trees through direct and indirect effects which could include the reduction in arbuscular mycorrhizal fungi (AMF) and their benefit to trees. To elucidate the role of AMF, we compare plant performance indicators, arbuscular mycorrhizal (AM) colonization and AMF communities in 20 trees distributed in two areas of central Argentina which differed in livestock grazing intensity. The area with high livestock density presented more soil degradation and trees with a lower overall plant performance than the area with reduced livestock density. The AM colonization values of P. australis were considerably higher than reported for other tree species and the area with high livestock density had a lower proportion of arbuscules and higher proportion of hyphae, while vesicles and AM colonization – all structure considered together – did not differ between areas. Overall AMF spore number and of most species when considered separately was significantly higher in the area with high livestock density, suggesting a high tolerance and adaptation of AMF to livestock. We conclude that a reduction in livestock improves the performance of P. australis, that this improvement could be mediated by an increase in the proportion of arbuscules, but there does not appear to be any limitation in AM colonization or AMF spore number which could otherwise be limiting forest restoration.     

Arbuscular mycorrhizal colonization of vascular plants from the Yungas forests, Argentina

In Argentina, the Yungas forests are among the ecosystems most affected by human activity, with loss of biodiversity. To assess the mycorrhizal status in these ecosystems, the roots of 41 native plant species belonging to 25 families were collected throughout the year from two sites of the Yungas forests. Roots were washed and stained to study the presence of arbuscular mycorrhizas (AM). Morphological types of arbuscular mycorrhizas (Arum and Paris-type) and colonization patterns were identified and photographed. All plants presented AM colonization. The AM colonization patterns varied from single intracellular aseptate hyphae, coils, appresoria, to vesicles and/or arbuscules. Among the species studied, the Paris-type colonization showed to be dominant. Results confirmed that AM hosts are predominant in the Yungas of South American forests.     

N<Subscript>2</Subscript>-fixation along a gradient of long-term disturbance in tropical mangroves bordering the gulf of Mexico

Microbial processes are key elements in determining the productivity of mangroves, and reductions in these processes reflect the loss of microbial biodiversity and function due to fabricated disturbances. Because nitrogen is a major limiting nutrient for the productivity of these ecosystems, the goal of this study was to determine profiles of inorganic nitrogen combined with several environmental parameters, all in relation to the degree of long-term hydraulic impairment of a tropical, monospecific black mangrove (Avicennia germinans) forest that showed degradation ranging from total loss of mangrove cover to no disturbance. N₂-fixation, oxygen levels, and nitrite contents decreased significantly with the severity of the disturbance, and almost null levels were reached in the completely degraded zone, whereas salinity achieved very high values. Concomitantly, total N, ammonium, and P contents and ammonia volatilization increased significantly. Pore-water temperature and pH increased moderately. Other soil physical properties (sand, silt, clay, organic matter, and total C), which varied among the sampling sites, were not correlated with the level of disturbance. Principal component analyses, including environmental and biological parameters, suggested that the most significant finding was the considerable loss of N₂-fixation with increasing impairment, which was concomitant with significant increases in volatilization of ammonia and salinity. The results show that microbial N-cycling processes are highly sensitive to salinity and to man-made disturbances that modify the water level and flow.     

The relationship of propagule pressure to invasion potential in plants

Summary The invasive potential of a species can be assessed by propagule pressure, which measures the chances for propagules of a species to find a suitable habitat for establishment and reproduction. Seeds, fruits, and vegetative structures that contribute to the propagule pressure are morphologically, physiologically and genetically different from one another, thus each kind should have a specific way of contributing to a successful invasion. In this paper we review plant traits that contribute to the propagule pressure. Seed production provides an estimate of the potential multiplication rate of the weed. However, it is gap-sensing mechanisms of seeds based on dormancy termination and germination requirements, which significantly contribute to the naturalization and invasion processes assuring a successful seedling establishment in environments of high competition. Dispersal of propagules reduces competition, mating with a sibling, and subsequent inbreeding depression, and increases colonization opportunities and range of expansion. Some of those benefits can be achieved in a population by existence of dormancy mechanisms and thus, the existence of a seed bank. Finally, vegetative propagation may ensure expansion of local populations when seedling establishment is low. Broadening the scope of traits that are considered in the breeding programs aimed at commercial production of plant propagules, to include those related to propagule pressure, is essential for adequate evaluation of invasive potential.     

Ontogeny and total sugar content of yacon tuberous roots and other three Smallanthus species (Heliantheae,Asteraceae), insights on the development of a semi-domesticated crop

The ontogeny of the tuberous roots of yacon (Smallanthus sonchifolius), an ancient Andean crop, is described for the first time along with three other wild species of Smallanthus: S. connatus, S. macroscyphus and S. siegesbeckius. Tuberous storage roots are present in the four species. Tuberization results from unusual secondary thickening. A meristematic endodermis maintains the primary cortex by generating cortex cells continuously. Secretory schizogenous canals develop adjacent to the endodermis in opposition to the phloem poles. Phellogen originates in the outer layers of the parenchymatic cortex. The four species develop a parenchymatous pith that stores mainly fructooligosacharides (FOS) and plays an important role in storing water, protecting the plant from drought stress and environmental hazards in the Andean climate. In yacon, domestication has produced a wide pith that stores water, reducing sugars and FOS with low degree of polimerization, that could have eventually made it more palatable as compared to the wild counterparts.