Demand for forest ecosystem services: a comparison study in selected areas in the Czech Republic and China

European Journal of Forest Research - Ecosystem services are investigated from many perspectives, but there are very few studies comparing the perception of forest and demand for forest ecosystem...     

Local knowledge and management of simpukng (forest gardens) among the Dayak people in East Kalimantan,Indonesia

Among the Dayak people in East Kalimantan, simpukng (“forest gardens”) are an important component of their traditional farming systems. Simpukng is managed secondary forests in which selected species of fruits, rattan, bamboo, timber and other plants are planted. While most are owned by families and passed down from one generation to the next, some are managed on a communal basis. Complex customary Dayak rules exist that control the use and inheritance of these forests that help to avoid over-exploitation of resources. There is clear gender division of labour among Dayak in the management of simpukng that provide a range of products – for household consumption and sale and for customary rituals – fruits, vegetables, medicines, fire wood, honey, rattan, bamboos, and timber. Local knowledge about the more highly valued species are discussed. These indigenous forest garden systems are currently under threat from large-scale mining and logging activities; conflicts between local and external agencies are unfortunately frequent. This paper examines the development and management of simpukng in four Dayak villages in East Kalimantan and their implications on sustainable management of natural resources, with particular emphasis on the role of local knowledge of some of the more highly valued species and the current challenges faced by these communities in maintaining their traditional agroforest management practices.     

Calcitriol Treatment Attenuates Uric Acid-Induced Kidney Injury via Super Oxide Dismutase-1 (SOD-1) Upregulation and Fibrosis Reduction

Background:Hyperuricemia induces nephropathy through the mediation of oxidative stress, tubular injury, inflammation, and fibrosis. The high uric acid level is associated with the reduction of vitamin D levels. However, the reno-protective effects of this vitamin in hyperuricemia condition remain unknown. This study aimed to elucidate calcitriol treatment in a uric acid-induced hyperuricemia mice model. Methods:Uric acid (125 mg/kg BW) was administered intraperitoneally for 7 (UA7) and 14 (UA14) days. Calcitriol (0.5 g/kg BW) was intraperitoneally injected for the following seven days, after 14 days of uric acid induction (UA14VD7 group). The control group received NaCl 0.9%, by the same route. Serum creatinine was measured using calorimetric method, and uric acid levels were assessed using enzymatic calorimetric assay. Tubular injury and fibrosis were assessed using PAS and Sirius red staining. RT-PCR and qRT-PCR were carried out for the analyses of SOD-1, Collagen-1, and TGF-1 mRNA expression in the kidney. Immunostaining of SOD-1 was performed to detect its expression in the kidney. Results:Uric acid and creatinine levels markedly increased in UA14 groups, followed by an exacerbation of tubular injury. RT-PCR revealed the upregulation of Collagen-1 and TGF-1, along with the downregulation of SOD-1. Calcitriol treatment attenuated the injury with reducing uric acid and creatinine levels, as well as tubular injury. This was associated with lower Collagen-1 and TGF-1 mRNA expression compared to the UA7 and UA14 groups. SOD-1 was upregulated in epithelial cells in the UA14VD7 group. Conclusion:Calcitriol treatment after uric acid induction may attenuate kidney injury through upregulation of SOD-1 and downregulation of Collagen-1 and TGF-1 gene expression. Key Words: Fibrosis, Hyperuricemia, Kidney injury, Superoxide dismutase-1, Vitamin D     

In silico screened Mycobacterium avium subsp. paratuberculosis (MAP) recombinant proteins upregulated under stress conditions are immunogenic in sheep

Mycobacterium avium subsp. paratuberculosis (MAP) is the causative agent of Johne's disease (JD) in ruminants. MAP is known to enter a dormant phase outside the host, typically on soil. In vitro experiments have reported regulation of certain MAP genes when exposed to stressors similar to what is thought to produce dormancy. It is believed that in vivo regulation of dormancy genes and associated proteins by MAP may play a role in evading the host defence mechanisms and induce the host immune response against these dormancy-related proteins. Five proteins encoded by dormancy-related genes that were previously found to be upregulated under stress conditions and predicted through in silico analysis to possess immune epitopes (three hypothetical proteins and two proteins involved in fatty acid metabolism) were selected. Recombinant proteins were produced, purified and evaluated by indirect enzyme-linked immunosorbent assay (ELISA) for immunogenicity using a panel of sera obtained from sheep unexposed and exposed to MAP. The antibody levels of the exposed group were significantly higher than the unexposed group (P<0.001). Individually, the five proteins were found to discriminate between sera from sheep exposed to MAP compared to unexposed sheep. At 91% diagnostic specificity, the diagnostic sensitivity of the recombinant antigen ELISA ranged from 24% to 42% and AUC(ROC) from 0.7015 to 0.8405.     

Protein digestibility-corrected amino acid scores (PDCAAS) for soy protein isolates and concentrate: criteria for evaluation

Protein quality, as determined by the PDCAAS method, is a measure of a protein's ability to provide adequate levels of essential amino acids for human needs. PDCAAS is calculated using an amino acid profile and true digestibility of a food protein. Soy protein is recognized as a high quality plant protein, but published PDCAAS values may vary based on the soy protein ingredient as well as the reproducibility and accuracy of the testing methods. Comparison of PDCAAS values for four differently processed soy ingredients, including three isolated soy proteins (ISP) and one soy protein concentrate (SPC), was made using two different laboratories with evaluation of the impact of the reproducibility and accuracy of amino acid profiles. PDCAAS calculations, using amino acid values from one laboratory, yielded a truncated PDCAAS of 1.00 for all four ingredients, while a second laboratory provided statistically significantly lower scores (0.95-1.00). We conclude that analytical method error can be a significant contributor to PDCAAS differences and can be mitigated by the application of amino acid nitrogen recovery correction factors.     

Epigenetic regulation – contribution to herbicide resistance in weeds?

Continuous use of herbicides has resulted in the evolution of resistance to all major herbicide modes of action worldwide. Besides the well‐documented cases of newly acquired resistance through genetic changes, epigenetic regulation may also contribute to herbicide resistance in weeds. Epigenetics involves processes that modify the expression of specific genetic elements without changes in the DNA sequence, and play an important role in re‐programming gene expression. Epigenetic modifications can be induced spontaneously, genetically or environmentally. Stress‐induced epigenetic changes are normally reverted soon after stress exposure, although in specific cases they can also be carried over multiple generations, thereby having a selective benefit. Here, we provide an overview of the basis of epigenetic regulation in plants and discuss the possible effect of epigenetic changes on herbicide resistance. The understanding of these epigenetic changes would add a new perspective to our knowledge of environmental and management stresses and their effects on the evolution of herbicide resistance in weeds. © 2017 Society of Chemical Industry     

Influence of foliar application of mineral nutrients at different growth stages of guava

Foliar application of nutrients enhances efficient use along with quick response. The experiment was undertaken to study the effect of foliar application of mineral nutrients viz., boron (B), zinc (Zn), calcium (Ca), and potassium (K) sprayed at different growth stages viz., at fruit set and at two weeks after fruit set of guava (Psidium guajava L.). Increase in plant canopy and minimum seed index was in Zn (0.03%) sprayed at fruit set. Fruit size, sugar: acid, and organoleptic score were better in K (0.5%) sprayed at two weeks after fruit set. Increased yield in Zn (0.01%) and pectin enhancement with B (0.03%) was found at two weeks after fruit set, respectively. Minimum physiological loss in weight of fruits was with Ca (0.5%) sprayed at two weeks after fruit set. In general, for most of the desirable characters 0.5% potassium (K) spray at 2 weeks after fruit set had better results.     

A retrotransposon-based probe for fingerprinting and evolutionary studies in rice (Oryza sativa)

A genomic DNA fragment (pAA7-2) amplified by a random amplified polymorphic DNA primer from the rice cultivar IR68 was used to assess the genetic variation and genetic relationships among the species of genus Oryza. A Southern hybridization experiment of diverse upland rice accessions using a single restriction enzyme HindIII generated unique DNA fingerprint for each accession. The differential hybridization pattern reflecting the copy number variation of pAA7-2 in a collection of wild species and cultivated species of rice provided insight about the genetic relationships among them. All AA genome species exhibited clear banding pattern suggesting presence of fewer copies of this sequence. Strongest hybridization signal was obtained in species belonging to BB, CC, GG, BBCC, CCDD genomes, whereas weakest hybridization signal was visible in EE, FF, and HHJJ genome species. Oryza brachyantha was the most divergent species. Clear difference in banding pattern was evident between Oryza schlechteri and Oryza coarctata belonging to HHKK genome. Although pAA7-2 had no repetitive sequences often associated with hypervariable loci, homology to a putative unclassified expressed retrotransposon distributed over several rice chromosomes was responsible for the complex banding patterns. There were more sites homologous to pAA7-2 sequence in corn and sorghum genome compared with the rice genome. The study demonstrates the potential of pAA7-2 as a powerful molecular tool for DNA fingerprinting, genetic diversity, phylogenetic, and evolutionary studies in Oryza sativa and its wild relatives and other grasses.     

Insect growth-regulating effects of <Emphasis Type="BoldItalic">Withania somnifera</Emphasis> in a polyphagous pest, <Emphasis Type="BoldItalic">Spodoptera litura</Emphasis>

Treatment of sixth instar larvae and pupae of the polyphagous pest Spodoptera litura Fabr. (Lepidoptera: Noctuidae) with an acetone extract of leaves of Ashwagandha, Withania somnifera L. (Solanaceae), caused toxicity, molt disturbances, formation of larval–pupal, pupal–adult intermediates and adultoids. Our results suggest that W. somnifera acts as an insect growth regulator causing disruption of the endocrine mechanism regulating molting and metamorphosis.     

Correlation between morphological,chemical and RAPD markers for assessing genetic diversity in Withania somnifera (L.) Dunal

Genetic diversity among 14 Withania accessions were studied using morphological, chemical, and RAPD (Rapid Amplification of Polymorphic DNA) markers. On the basis of morphological variation and maximum assimilation of chemical constituents, wild accessions were considered elite as compared to cultivated. The molecular study showed that a total of 12 DNA fragments were amplified with five random decamer primers 75% of which were polymorphic. Genetic similarity matrix based on the Dice index detected coefficients ranging from 0.556 to 0.941. These coefficients were used to construct a dendrogram using unweighted pair group method with arithmetic mean (UPGMA). These accessions were clustered into two major groups; the first group included AGB-009, AGB-012, AGB-042, AGB-030, AGB-053, AGB-019, AGB-017, AGB-002, and AGB-003; the second included AGB-025, AGB-001, AGB-036, AGB-015, and AGB-055. The highest similarity among the Ashwagandha accessions was observed between AGB-009 and AGB-030, AGB-009 and AGB-012, AGB-042 and AGB-030, AGB-025 and AGB-001, AGB-036 and AGB-015, AGB-015 and AGB-055 and between AGB-015 and AGB-055. The most distant populations in the dendrogram were AGB-053 and AGB-055. The combination of morphological, chemical, and molecular markers assessment will be useful in studying the genetic diversity of Withania for identification, conservation, breeding, improvement activities, and in order to achieve elite type in terms of bioactive metabolites.