Evaluation of a microwave method for dry matter determination in faecal samples from weaned pigs with or without clinical diarrhoea

Microwave drying as a procedure for determination of faecal dry matter in weaned pigs was evaluated and clinical relevant cut-off values between faecal consistency scores were determined. Repeatability and reproducibility were evaluated. Overall coefficient of variation was 0.03. The 95% confidence limits for any future faecal subsample examined by any operator in any replica were ± 0.85% faecal dry matter. Robustness in relation to weight of wet faeces was evaluated. The weight categories were 0.5, 1.0, 1.5, 2.0 and 3.0 g. Samples of 0.5 g gave significantly different mean faecal dry matter content compared to weighing of 1.0-3.0 g. Agreement with freeze-drying was evaluated. Lin's concordance correlation coefficient was 0.94. On average the faecal dry matter values was 1.7% (SD=1.99%) higher in freeze dried compared to micro waved samples. Non-parametric ROC analyses were used to determine optimal faecal dry matter cut-off values for clinical faecal consistency scores. The 4 consistency scores were score 1=firm and shaped, score 2=soft and shaped, score 3=loose and score 4=watery. The cut-off values were score 1: faecal dry matter content >19.5%, score 2: faecal dry matter content ≤ 19.5% and >18.0%, score 3: faecal dry matter content ≤ 18.0% and >11.3%, score 4: faecal dry matter content ≤ 11.3%. In conclusion, the microwave procedure has an acceptable repeatability/reproducibility and good agreement with freeze drying can be expected. A minimum of 1.0 g of wet faeces must be used for analyses. Faecal dry matter cut-off values between 4 different clinical consistency scores were determined.     

Transmission of intestinal helminths in Danish sow herds.

Faecal samples from sows and their litters, all untreated with anthelmintics, were examined in eight sow herds, ranging from very intensive to very traditional management. Four helminth genera were recorded, namely Oesophagostomum sp., Ascaris suum, Trichuris suis and Strongyloides ransomi. The herds with the most intensive management were only infected with A. suum, while the more traditionally managed herds were infected with three or four species. In one herd, the sows showed a small relative increase in the excretion of Oesophagostomum eggs during lactation, but in general there was no consistently observable peri-parturient increase in faecal egg output. Furthermore, faecal examination of 5-12-week-old pigs indicated that sow-to-piglet transmission was important in the traditionally managed herds, while it was negligible in the intensive herds. A seasonal variation in the excretion of Oesophagostomum sp. and A. suum eggs was observed in the youngest pigs in the traditional herds, with the highest faecal egg counts occurring in the summer and autumn. However, this pattern became indistinct during the fattening period and did not exist in the sows, except for A. suum infections in the heavily infected traditional herds. The helminths egg excretion in the intensive herds did not show any seasonal variation.     

Evaluation of four commercial serum ELISAs for detection of Mycobacterium avium subsp. paratuberculosis infection in dairy cows

During the first 3 months of 2006, a study was performed on four dairy cattle herds with a history of clinical paratuberculosis, to evaluate different enzyme-linked immunosorbent assays (ELISAs). Serum samples obtained from 326 animals were analysed using four ELISAs to detect antibodies to Mycobacterium avium subsp. paratuberculosis (MAP). Kappa (kappa) concordance coefficients in pairwise comparisons of the ELISA outcomes ranged up to 0.22 (linear kappa) and 0.25 (quadratic kappa). When the borderline positives obtained were considered as negatives, kappa values remained low (kappa up to 0.19). Having performed the serological tests, faecal samples were then obtained from 55 animals (including all animals testing positive in two or more ELISAs) from the same herds. Faecal culture and faecal polymerase chain reaction (PCR) for the detection of MAP were negative in all cases. The results indicate that neither the currently available serum ELISAs nor faecal culture and PCR are effective for the early detection of MAP in dairy cattle.     

Evaluation of inter-observer agreement when using a clinical respiratory scoring system in pre-weaned dairy calves

AIM: To determine inter-observer agreement for a clinical scoring system for the detection of bovine respiratory disease complex in calves, and the impact of classification of calves as sick or healthy based on different cut-off values.

METHODS: Two third-year veterinary students (Observer 1 and 2) and one post-graduate student (Observer 3) received 4 hours of training on scoring dairy calves for signs of respiratory disease, including rectal temperature, cough, eye and nasal discharge, and ear position. Observers 1 and 2 scored 40 pre-weaning dairy calves 24 hours apart (80 observations) over three visits to a calf-rearing facility, and Observers 1, 2 and 3 scored 20 calves on one visit. Inter-observer agreement was assessed using percentage of agreement (PA) and Kappa statistics for individual clinical signs, comparing Observers 1 and 2. Agreement between the three observers for total clinical score was assessed using cut-off values of ≥4, ≥5 and ≥6 to indicate unhealthy calves.

RESULTS: Inter-observer PA for rectal temperature was 0.68, for cough 0.78, for nasal discharge 0.62, for eye discharge 0.63, and for ear position 0.85. Kappa values for all clinical signs indicated slight to fair agreement (<0.4), except temperature that had moderate agreement (0.6). The Fleiss’ Kappa for total score, using cut-offs of ≥4, ≥5 and ≥6 to indicate unhealthy calves, was 0.35, 0.06 and 0.13, respectively, indicating slight to fair agreement.

CONCLUSIONS AND CLINICAL RELEVANCE: There was important inter-observer discrepancies in scoring clinical signs of respiratory disease, using relatively inexperienced observers. These disagreements may ultimately mean increased false negative or false positive diagnoses and incorrect treatment of cases. Visual assessment of clinical signs associated with bovine respiratory disease needs to be thoroughly validated when disease monitoring is based on the use of a clinical scoring system.     

Prevalence of selected enteropathogenic bacteria in Hungarian finishing pigs

The aim of this study was to obtain prevalence estimates about the most important enteropathogenic bacteria: Lawsonia intracellularis, Brachyspira hyodysenteriae, Brachyspira pilosicoli, Salmonella enterica and Clostridium perfringens A and C in Hungarian farrow-to-finish pig herds. A total of 31 herds were selected, from where six pooled faecal samples, each containing three individual rectal faecal samples were collected from fattening pigs of 5-6 months of age. All 186 samples were examined by polymerase chain reaction (PCR) for the presence of the pathogens mentioned above. Lawsonia intracellularis was found in 29 herds (93.55%) and in 108 samples (58.06%); B. hyodysenteriae in 14 herds (45.16%) and in 23 samples (12.37%); B. pilosicoli in 19 herds (61.29%) and in 53 samples (28.49%); S. enterica in 17 herds (54.83%) and in 40 samples (21.50%). We detected the presence of C. perfringens A in 19 herds (61.29%) and in 46 samples (24.73%), while C. perfringens C was found in 8 herds (25.81%) and in 11 samples (5.91%). All examined herds were infected with one or more of these agents. Herds with diarrhoea in the mid- to late finishing phase had almost 10 times higher prevalence of B. hyodysenteriae than herds without such a history.     

A serological survey to determine the prevalence of infection with Treponema hyodysenteriae in Western Australia

A serological survey to detect antibody titres against Treponema hyodysenteriae was conducted on pigs from 106 herds in Western Australia. Titres indicating a positive result in the tests were determined by examining 400 sera from 4 herds known to be free of swine dysentery, and sera from immunised or experimentally infected pigs. Samples of serum from 40 bacon-weight pigs from each of the 106 herds were then collected at 2 abattoirs. Each serum was tested in enzyme-linked immunosorbent assays (ELISA) against the lipopolysaccharide of T hyodysenteriae of serogroups A, B and E, respectively. To assist in evaluating the test, 19 herds were resampled and retested, and faecal samples from 17 herds were cultured for T hyodysenteriae. Thirty-five of the 106 herds (33%) had serological evidence of infection when only one batch of sera from each herd was tested. The ELISA to detect T hyodysenteriae infection in herds using 40 sera was estimated as having a sensitivity of 77.3% and a specificity of 81.8% based on the owners' opinion of their herds disease status. Prevalence of infection within herds ranged from 2.5% to 47.5%, with a mean of 18%.     

Prevalence of intestinal pathogens in Danish finishing pig herds

Our aim was to determine the prevalence of the intestinal bacteria: Lawsonia intracellularis, Brachyspira hyodysenteriae, Serpulina intermedia, Brachyspira innocens, Brachyspira pilosicoli, pathogenic Escherichia coli (serogroups O138, O139, O141 and O149) and Salmonella enterica in Danish finishing pig herds. A total of 79 herds was randomly selected and visited during 1998. From each herd, 20 faecal samples were collected from individual pigs weighing 30–50 kg. Furthermore, 10 pooled pen samples were collected and examined for S. enterica. In total, 1580 faecal samples and 790 pen samples were collected and examined by polymerase chain reaction (PCR) or culture. L. intracellularis was found in 74 herds (93.7%), B. hyodysenteriae in two herds (2.5%), S. intermedia in 10 herds (12.7%), B. innocens in 27 herds (34.2%), B. pilosicoli in 15 herds (19.0%), pathogenic E. coli in 19 herds (24.1%) and S. enterica in eight herds (10.1%). The within-herd prevalences of L. intracellularis and B. hyodysenteriae were 25–30%; the within-herd prevalences of the other agents were 5–10%. Three herds (4%) were not infected with any of the bacteria and 25 herds (32%) were only infected with L. intracellularis.     

The role of intestinal volatile fatty acids in the Salmonella shedding of pigs

Factors affecting colonization of the intestinal tract by salmonellas were studied in two pig herds. In herd H 18% of the faecal samples taken from live pigs and 30% of the colon content samples collected at slaughter contained salmonellas. In contrast, the 50 faecal samples taken from pigs of herd L were negative and only 2% of the colon contents collected at the yielded salmonellas. An antibacterial effect inhibiting salmonella multiplication was demonstrable in vitro in colon contents from pigs of herd L. No such effect was found to exist in samples taken from pigs of herd H. The antibacterial effect is due to the non-dissociated volatile fatty acid (VFA) molecules present in the colon content. As the degree of VFA dissociation depends on the pH of the environment, at lower pH values (pH 6.1 +/- 0.2) of the colon contents from herd L the ratio of non-dissociated VFA molecules is higher and the resulting antibacterial effect is stronger than in samples from herd H (pH 7.1 +/- 0.3).     

Salmonella serotypes present on a sample of Irish pig farms

A survey of the prevalence of Salmonella species infection was conducted on 59 Irish farrow-to-finish pig herds. Faecal samples were collected from the pens of first-stage weaners (growing pigs approximately three to 10 weeks of age), second-stage weaners (approximately 10 to 17 weeks of age) and fatteners, and from the dry sow and farrowing sow houses. The prevalence of infection was estimated to within 5 per cent with a 95 per cent confidence interval. Thirty of the 59 herds were infected, 12 with Salmonella Typhimurium only, eight with Salmonella Derby only and seven with both S Typhimurium and S Derby; serotypes London, Livingstone and Infantis were each isolated from a single herd. Farms in Ireland are assigned to one of three infection categories on the basis of the antibody levels in samples of meat juice taken at slaughter. When a herd was classified as either positive or negative on the basis of the isolation of Salmonella from at least one faecal sample there was no association between the herd's category as determined by meat juice serology and the probability of the isolation of Salmonella from the faecal samples. However, there were differences in prevalence between pigs at different stages of production in herds of different categories. Farrowing sow houses in moderately infected (category 2) herds had significantly lower infection rates (P < or = 0.05) than other herd categories and other stages of production. Pigs from first-stage weaner pens in slightly infected (category 1) herds were more likely to be infected with Salmonella than pigs at any other stage of production or category of herd.     

Prevalence of helminth infections in swine in Denmark

During 1982-1984 the occurrence of helminths in 66 sow herds was determined by examining faecal samples from swine of different age groups. Ascaris suum was found in 88% of the herds, while Oesophagostomum spp. and Trichuris suis were found in 58 and 23% of the herds, respectively. Strongyloides ransomi and Hyostrongylus rubidus was not identified in any of the herds. The occurrence of both A. suum and Oesophagostomum spp. was strongly related to the age of the animals. A. suum was most frequently found in growing pigs (30% of the fatteners and 25% of the gilts), whereas only 11-19% of the animals of the adult stock were excreting eggs. In contrast the prevalence of Oesophagostomum spp. increased with the age of the hosts, from 10% of the fatteners to 35 and 44% of the sows and boars, respectively. T. suis occurred only very sporadically, with the highest prevalence being 3% in the gilts. In comparison to previous Danish surveys the present mean prevalences of A. suum and Oesophagostomum spp. were low. Extremely low herd prevalences were found among large herds with intensive management and housing. In these herds, the pigs were infected at a later stage in life than pigs in more traditionally managed herds.     

Prevalence of Treponema hyodysenteriae in healthy pigs.

The prevalence of Treponema hyodysenteriae in faecal samples from healthy pigs of various ages in different farrowing units was investigated.Samples from herds designated as Category I were processed within 2 hrs. of sampling. Samples from herds designated as Category II were transported 2 to 3 days before cultivation procedures started. T. hyodysenteriae was demonstrated in 53.7 % to 93 % of the samples collected from Category I herds. No marked difference in the frequency of positive samples from the various age groups of pigs was found. In Category II herds, the organism was demonstrated in 10 % of the samples.The degree of beta-haemolysis shown by isolated strains was grouped into 3 groups: weak, moderate and strong. Strongly betahaemolytic strains, supposedly enteropathogenic, were demonstrated in all Category I herds. Such strains were found in 4.6 % to 25 % of the positive samples in these herds. In Category II herds, 2 out of 17 positive samples harboured strongly beta-haemolytic strains of T. hyodysenteriae.The amount of growth of T. hyodysenteriae on primary plates inoculated with sample material originating from the 2 categories of herds was mostly moderate or abundant. Strongly beta-haemolytic isolates originating from Category I herds produced abundant growth on primary plates in approx. 60 % of samples harbouring such strains. In samples from Category I herds with strains producing weak or moderate beta-haemolysis sparse and moderate amount of growth of the organism was predominant.     

Biosecurity in 116 Danish fattening swineherds: descriptive results and factor analysis

Biosecurity measures are important for the herd's protection against diseases and also to provide nationwide protection against the introduction of exotic diseases. In this paper, we describe the farmers’ choices and routines regarding biosecurity in Danish fattening herds.

Overall, 116 Danish swine fattening herds in three areas of different pig density were interviewed.

Of these herds, 78% purchased weaners from one sow herd only, whereas 10% purchased from >5 sow herds during 1 year. Large herds (>500 finishers) purchased weaners more often than smaller herds (≤500 finishers). Only two swine producers purchased weaners from a market. Almost all herds (95%) received weaners from one sow herd at one time, and only one herd received from >5 sow herds in one batch. Twenty-one percent did not use an effective barrier between the loading area and the stables when delivering pigs for slaughter. Entry rooms (in which clothing and boots are changed) were common at the farm, and the numbers of visitors were generally low (<10 visitors a year).

Factor analysis was performed to find underlying structures of the biosecurity measures in the herd; four factors were chosen (eigenvalue > 3.10). A site scoring high on factor 1 was a large SPF herd, which received weaners from a single source, had biosecurity requirements for the transport vehicles, and had a high level of biosecurity for visitors. A site scoring high on factor 2 was a multi-site farm, which had personnel working on more than one of the sites, only received weaners from one sow herd, had delivering herds placed close to the participating site, and transported animals themselves. A site scoring high on factor 3 was a site which hired commercial transport for slaughter, was situated far from the abattoir and had a high level of biosecurity when loading pigs. A production site scoring high on factor 4 was a large site, which used all-in/all-out management, washed and disinfected between each group, and purchased many weaners.     

Seroprevalence and antibiotic sensitivity of serotypes of Salmonella enterica in Greek pig herds

Blood samples were taken from 50 pigs in each of 59 farrow-to-finish production herds and from 40 pigs in each of four of five registered multiplying herds. Samples of feed and faeces were also collected from 17 of the production herds and from the four multiplying herds. The sera were tested for antibodies to Salmonella enterica by the Danish mix-ELISA, and the organisms were isolated, serotyped and sensitivity tested by standard techniques. The average within-herd seroprevalence was 3.4 per cent and at least one pig tested seropositive in 21 of the 59 herds. In the multiplying herds, only a single seroreactor was detected. Salmonellae were isolated from only five of 95 feed samples, from two of the 17 herds sampled, Salmonella tennessee in four of five samples from one herd and an untypable strain in one of five samples from another. Four infected faecal samples were detected in four herds; they harboured Salmonella typhimurium, Salmonella bredeney or Salmonella london. No salmonellae were isolated from the samples of feed and faeces taken from the multiplying herds. The S london and S typhimurium had a low sensitivity to streptomycin, kanamycin and neomycin, and the S typhimurium also had low sensitivity to amoxycillin, ticarcillin, piperacillin, amoxycillin + clavulanic acid, cefalotin and cefoperazone. The other isolates were sensitive to all the antimicrobial agents tested.     

Prevalence of and risk factors for influenza in southern Ontario swine herds in 2001 and 2003

This research included 2 prevalence studies and a risk-factor investigation conducted in 2001 at 93 sites with sows only, finishers only, or both. In 2001, 1300 serum samples from sows in 65 herds and 720 serum samples from finisher pigs in 72 herds were tested for antibodies to swine influenzavirus (SIV) of H1N1 subtype with an enzyme-linked immunosorbent assay (ELISA). In 2003, 1140 serum samples from sows in 76 herds were tested for antibodies to SIV of H3N2 subtype with a hemagglutination-inhibition assay based on A/Swine/Colorado/1/77 and A/Swine/Texas/4199-2/98 isolates. The apparent pig-level H1N1 seroprevalence in 2001 was 61.1% and 24.3% in sows and finishers, respectively. The apparent pig-level seroprevalence in 2003 for H3N2 A/Sw/CO/1/77 and A/Sw/TX/4199-2/98 in sows was 0.6% and 0.7%, respectively. The factors associated with sow-herd H1N1 positivity included pig or farm density at different geographic levels, an external source of breeding pigs, number of animals on site, and decreasing proximity to other barns. Higher-parity sows had higher odds of seropositivity, but there was significant random variability in this association among herds. The odds of finisher-herd SIV positivity were higher with large herd size, high pig farm density, and farrow-to-finish type of farm. Finisher herds were SIV-positive only if source sow herds were positive. Simultaneously, 45% of finisher herds were SIV-negative although sow source herds were positive.     

Actinobacillus pleuropneumoniae in Thai pig herds. Prevalence of serum antibodies and relation to performance

The aim of the study was to investigate the prevalence of Actinobacillus pleuropneumoniae infections in market weight pigs in Thailand. ELISA systems employing purified lipopolysaccharide antigens were used to detect antibodies in 549 serum samples collected from pigs of 22 herds. Relevant cut-off values were established from three herds defined seronegative. Serum antibodies were detected to all serotypes except serotype 10. Almost 60% of the samples were seropositive to at least one serotype and 45% of the pigs were seropositive to more than one serotype. Antibodies to the cross-reacting serotypes 1, 9 or 11 were found in 29% of the pigs. Other common serotypes included the cross-reacting serotypes 3, 6 or 8 (26% seropositive pigs) and serotype 5a (also 26%). Antibodies to serotypes 2, 5b and 12 were low in prevalence (<10%). Three herds were regarded to be seronegative and six to have a low pathogen load with respect to the prevalence of seropositive pigs. The remaining 13 herds had a high incidence of pigs with antibodies to A. pleuropneumoniae, dominated by serotypes 1-9-11 and 5a (n = 6), serotypes 3-6-8, and 5a (n = 4) or 1-9-11, 3-6-8, 5a and 4-7 (n = 3). A low pathogen load with respect to A. pleuropneumoniae, as well as small herd size and age-segregated rearing, tended to improve the performance of growers.     

A comparative examination of swine sera for antibody to Aujeszky virus with the conventional and a modified virus-serum neutralization test and a modified direct complement fixation test.

Sera of pigs from élite breeding herds, of boars and sows collected at slaughter-houses, and of pigs from herds known to be infected, were examined for antibody to Aujeszky virus. The conventional and a modified virus-neutralizing antibody (VNA) test and a modified direct complement fixation (CF) test were employed. In simultaneous titrations of positive sera the modified VNA test gave titers approx. 4 log2 units above the titers obtained by the conventional test. The conventional VNA test was found insufficiently sensitive. Unspecific neutralization in the modified VNA test was infrequent in serum dilution 1/2 and rare in dilution 1/4. The GF tests on sera of slaughter sows and animals from known infected herds showed a remarkable consistency with the VNA tests. Inconsistent results were obtained with but few sera. Abt. 5 % of the sera could not be examined because of complement fixation with control antigen.     

Herd diagnosis of low pathogen diarrhoea in growing pigs – a pilot study

Background

The major indication for antibiotic use in Danish pigs is treatment of intestinal diseases post weaning. Clinical decisions on antibiotic batch medication are often based on inspection of diarrhoeic pools on the pen floor. In some of these treated diarrhoea outbreaks, intestinal pathogens can only be demonstrated in a small number of pigs within the treated group (low pathogen diarrhoea). Termination of antibiotic batch medication in herds suffering from such diarrhoea could potentially reduce the consumption of antibiotics in the pig industry. The objective of the present pilot study was to suggest criteria for herd diagnosis of low pathogen diarrhoea in growing pigs.Data previously collected from 20 Danish herds were used to create a case series of clinical diarrhoea outbreaks normally subjected to antibiotic treatment. In the present study, these diarrhoea outbreaks were classified as low pathogen (<15% of the pigs having bacterial intestinal disease) (n =5 outbreaks) or high pathogen (≥15% of the pigs having bacterial intestinal disease) (n =15 outbreaks). Based on the case series, different diagnostic procedures were explored, and criteria for herd diagnosis of low pathogen diarrhoea were suggested. The effect of sampling variation was explored by simulation.

Results

The diagnostic procedure with the highest combined herd-level sensitivity and specificity was qPCR testing of a pooled sample containing 20 randomly selected faecal samples. The criteria for a positive test result (high pathogen diarrhoea outbreak) were an average of 1.5 diarrhoeic faecal pools on the floor of each pen in the room under investigation and a pathogenic bacterial load ≥35,000 per gram in the faecal pool tested by qPCR. The bacterial load was the sum of Lawsonia intracellularis, Brachyspira pilosicoli and Escherichia coli F4 and F18 bacteria per gram faeces. The herd-diagnostic performance was (herd-level) diagnostic sensitivity =0.99, diagnostic specificity =0.80, positive predictive value =0.94 and negative predictive value =0.96.

Conclusions

The pilot study suggests criteria for herd diagnosis of low pathogen diarrhoea in growing pigs. The suggested criteria should now be evaluated, and the effect of terminating antibiotic batch medication in herds identified as suffering from low pathogen diarrhoea should be explored.

Electronic supplementary material

The online version of this article (doi:10.1186/2046-0481-67-24) contains supplementary material, which is available to authorized users.