New method for a two-step hydrolysis and chromatographic analysis of pectin neutral sugar chains

A new method for the determination of the main neutral sugars in pectin has been developed. The sample preparation involves a mild chemical attack followed by an enzymatic hydrolysis. The completeness and nondestructive character of the method are demonstrated by comparison of the results obtained with different acids such as H2SO4, HCl, and trifluoroacetic acid (TFA) at different concentrations (2, 1, or 0.2 M) at two temperatures (80 or 100 degrees C). The chemical hydrolysis of pectin neutral sugar chains with strong acid (1 or 2 M) and high temperature (100 degrees C) shows that the liberation of the pectin sugars is not realized at the same rate for each sugar. Different optimum conditions are thus obtained. However, the chemical pectin hydrolysis with 0.2 M TFA at 80 degrees C is characterized by the liberation of pectin neutral sugar side chains without any degradation within 72 h of hydrolysis. Under these conditions, the liberation of some pectin sugars, essentially galactose, glucose, and rhamnose, was not complete. An enzymatic hydrolysis is necessary to obtain a complete release of all the sugars. The combination of the two treatments, a chemical hydrolysis realized with diluted acid (0.2 M) for 72 h at low temperature (80 degrees C) on one hand and an enzymatic hydrolysis on the other hand, allow a total liberation of pectin sugars. The quantitative analysis of the carbohydrates is realized with accuracy, high selectivity, and sensitivity with high-performance anion-exchange chromatography with pulsed-amperometric detection. The sugars can be analyzed without any derivatization with a limit of quantification of 0.1 mM.     

THE HYDROLYTIC EXTRACTION OF CARBOHYDRATES FROM SOIL BY SULPHURIC ACID

The parameters of the extraction and hydrolysis of soil carbohydrates by methods involving 24N H₂SO₄ and N H₂SO₄ were studied for a sandy granitic loam. Sugars were measured by alkaline ferricyanide, orcinol, anthrone (hexoses), orcinol-ferric chloride (pentoses), cysteine-sulphuric acid (methyl pentoses), glucose oxidase (glucose), and also by analysis of the individual sugars by paper chromatography. After shaking the soil with 24N H₂SO₄ at 20° C a further period of treatment with N H₂SO₄ at 100° C was required to obtain maximum hydrolysis of the soil carbohydrates. This period decreased from 17 h to 5 h as the time with 24N H₂SO₄ increased from 2 to 16 h. NH₂SO₄ at 100° C alone was less efficient. The extraction of pentoses by 24N H₂SO₄ reached a maximum within 8 h, and methyl pentoses within 4 h, both declining thereafter. The release of hexoses was continuing after 40 h. The best compromise involved extraction with 24N H₂SO₄ for 16 h followed by hydrolysis with N H₂SO₄ for 5 h. By this treatment yields of pentoses and methyl pentoses were respectively 99 and 92 per cent of the maximum obtainable.     

Determination of neutral sugars in soil by capillary gas chromatography after derivatization to aldononitrile acetates

We have quantified ribose, rhamnose, arabinose, xylose, fucose, mannose, glucose, and galactose in soil by gas chromatography (GC) simultaneously after converting to aldononitrile acetate derivatives. A recommended single-hydrolytic step by 4 M trifluoroacetic acid (TFA) at 105 °C for 4 h was more effective for releasing soil neutral sugars from non-cellulosic carbohydrates and better suited to our purification procedure compared with the sulphuric acid hydrolysis. Linearity of the GC detection for each neutral sugar was in the range of 10-640 μg ml⁻¹ and the recovery of neutral sugars from the spiked soil samples ranged from 76% to 109.7%. The coefficients of variation of the neutral sugars in four soils were lower than 2.0% for the instrument and 4.6-7.6% for the whole determination procedures. Compared with the trimethylsilyl (TMS) derivatization, the recovery of our newly modified method was more satisfactory and the reproducibility of ribose was improved significantly. Moreover, the aldononitrile acetate derivative was more stable than TMS derivative. Therefore, it is a promising approach suitable for a routine use in the quantitative analysis of soil neutral sugars, since it is fast, sensitive, and reproducible.     

Studies on the properties of organic matter in buried humic horizon derived from volcanic ash

To investigate the relationship between age and the sugar composition in hydrolysates of the surface horizon and buried humic horizons with age up to 28,000 years B.P., the neutral sugars and amino sugars in soil hydrolysates were determined.

The ratios of total sugar carbon content to total carbon content of soil ranged from 2.68 to 4.13 percent. These values showed no distinct relationship with age.

Rhamnose, fucose, arabinose, xylose, mannose, galactose, glucose, g1ucosamine and galactosamine were present in the hydrolysates of all soil samples.

The polysaccharides of soil samples which have been buried for shorter periods were dominated by glucose, while those of soil samples buried for longer periods were dominated by mannose.

The proportion of hexoses showed a tendency to increase with age, while that of pentoses showed a tendency to decrease with age.     

Changes of lignin phenols and neutral sugars in different soil types of a high-elevation forest ecosystem 25 years after forest dieback

Long-term effects of forest disturbance 25 yr ago on lignin and non-cellulosic polysaccharide pools in an unmanaged high-elevation Norway spruce (Picea abies L. [Karst.]) forest were investigated by comparing three dieback sites with three adjacent control sites with non-infested spruce on identical soils. Samples were taken from the forest floor and the mineral soil; one Ah horizon sample per site was physically fractionated into density and particle size fractions. Additionally, changes in the above- and belowground input of lignin and non-cellulosic polysaccharides after forest dieback were quantified. Lignin and its degree of structural alteration in plant and soil samples were assessed by CuO oxidation and subsequent analysis of the lignin phenols. Non-cellulosic polysaccharides were determined after hydrolysis with trifluoroacetic acid (TFA), derivatisation of their neutral sugar monomers by reduction to alditols, and subsequent acetylation. The total plant-derived input of lignin and non-cellulosic polysaccharides to the soil was similar for the dieback and the control sites. The chemical composition of the input has changed considerably after forest dieback, as shown by significantly higher syringyl/vanillyl (S/V) ratios and significantly lower (galactose+mannose)/(arabinose+xylose) (GM/AX) ratios. This indicates a changed plant input and a higher contribution of microbial sugars. Contents of lignin phenols in the forest floor and coarse particle size fractions of the A horizons were significantly smaller at the dieback sites (p<0.01). Moreover, larger acid-to-aldehyde ratios of vanillyl units (Ac/Al)_v indicated an increased degree of lignin phenol alteration. Also contents of neutral sugars were significantly (p<0.01) smaller in the forest floor, but not in the A horizons of the dieback sites. The GM/AX mass ratios as well as the (rhamnose+fucose)/(arabinose+xylose) (RF/AX) ratios in the forest floor and coarse particle size fractions of the mineral topsoil were significantly (p<0.01) larger after forest dieback, indicating a larger relative contribution of microbial sugars. In general, the lignin phenol and neutral sugar pools of all three soil types exhibited similar response patterns to the changed site conditions. Our results demonstrate that the lignin and neutral sugar pools of humic topsoil horizons are highly sensitive to forest disturbances. However, the two compounds show different patterns in the mineral soil, with the major neutral sugar pool being stabilized against changes whereas the lignin phenol pool decreases significantly.     

THE ORIGIN OF SOIL POLYSACCHARIDE: TRANSFORMATION OF SUGARS DURING THE DECOMPOSITION IN SOIL OF PLANT MATERIAL LABELLED WITH 14C

Incubation of soil with ¹⁴C-rye straw for 448 days resulted in the evolution of about 50 per cent of the carbon of the substrate as CO₂ The two main sugars of the straw, glucose and xylose, were degraded to approximately the same extent (70 per cent). The same results were obtained whether the soil was derived from granitic or basic igneous parent material. There was very little transformation of the substrate to galactose, mannose, arabinose, rhamnose, or fucose, and a much slower rate of degradation than with soil incubated with ¹⁴C-glucose over a similar period. Hydrolysis of the soil samples by a preliminary treatment with 5 N H₂SO₄, before treatment with 24 N H₂SO₄, followed by heating with N H₂SO₄ did not release significantly greater amounts of sugar than treatment with 24 N H₂SO₄ and N H₂SO₄ alone. Separate analysis of the hydrolysates showed that 90 per cent of each of galactose, mannose, arabinose, xylose, rhamnose, or fucose had been extracted by 5 N H₂SO₄, but only 50 per cent of the glucose. Fractionation of the straw-soil mixture after 224 days incubation showed that the specific activity of the glucose was higher in the humin fraction than in the fulvic acid, as would be expected if the remaining ¹⁴C were still in the form of unchanged plant material. This evidence that plant polysaccharide persists in soil could explain the presence of much of the xylose in the soil organic matter.     

Evolution of composition and content of soil carbohydrates following forest wildfires

The time evolution of the content and composition of carbohydrates was studied in the surface layer of forest soils non-affected and affected by wildfires. The low- and high-severity fires caused an immediate reduction of the C present as carbohydrates of 34% and 47–55%, respectively, which was due to the decrease of both hexoses and pentoses in two hydrolysis fractions (hydrolysate-A, non-cellulosic polysaccharides; hydrolysate-B, cellulosic polysaccharides). Carbohydrates tended to recover with time; however, values had still not reached the amounts found in the corresponding unburnt samples after 12–15 months. No difference between the unburnt and burnt samples was observed in the distribution of the neutral sugars in the hydrolysates over time. On a percentage basis, 72–92% of the total neutral sugars was extracted in hydrolysate-A (59 ± 7% hexoses; 24 ± 7% pentoses) and the rest, 8–28%, in hydrolysate-B (15 ± 5% hexoses; 2 ± 1% pentoses). The contribution of hexoses and pentoses to the neutral sugar pool was different between the two hydrolysis fractions being the hexoses/pentoses ratio higher for hydrolysate-B than for hydrolysate-A. The results also showed that the proportion of soil C present as carbohydrates-C rather than the total carbohydrates content should be used for monitoring short- and medium-term changes induced by fire in soil organic matter quality.     

THE ORIGIN OF THE PENTOSE FRACTION OF SOIL POLYSACCHARIDE

Incubation of soil with monosaccharide for 224 days resulted in the evolution of about 80 per cent of the substrate carbon as CO₂ and the transformation of 3 per cent to soil sugars whether the substrate was ¹⁴C-glucose or xylose and whether the soil was pH 7.4 or pH 5.0. There was no detectable change in the total amounts of individual sugars in the soil during incubation. ¹⁴C-glucose and xylose gave the same distribution of radioactivity among the soil sugars : hexoses and 6-deoxy-hexoses were initially well labelled, with glucose having twice the specific activity of the other sugars. As the incubation progressed some activity appeared in the pentoses (the activity in xylose became very low within the first 14 days of the ¹⁴C-xylose incubation) and that in the hexoses slowly declined, with glucose no longer predominant. Nevertheless after 448 days the hexoses were still 3–4 times more radioactive than the pentoses. The activity in rhamnose did not decline with time so that eventually it became the most strongly labelled sugar. Incubation of soil with glucose and ¹⁴C-acetate showed very little transformation of the acetate to sugars indicating that glucose is not metabolized to C₂ compounds before it is transformed to other sugars. Ammo-acids in soil incubated for 7 days with ¹⁴C-glucose had much lower levels of radioactivity than hexoses or 6-deoxy-hexoses. It is concluded that if soil pentose originates by microbial synthesis it must accumulate slowly by a long process of selective decomposition of a mixture of polysaccharides.     

A comparison of acid hydrolyses for the determination of carbohydrate content in soils

Abstract

Four Italian surface soils were used to compare four different acid hydrolyses for the determination of the total content of carbohydrates in soils. Soil hydrolyses in 0.25M and 1M H₂SO₄ and by mechanical shaking for 16 h released carbohydrates as efficiently as the 8 h soil hydrolysis under reflux. Degradation of released carbohydrates was probably the cause of the low values given by the hydrolysis in 72% H₂SO₄ for 15 min followed by a 16 h shaking in 0.5M H₂SO₄. This study confirms that the carbohydrate determination based on the colorimetric phenol‐sulphuric acid method is more accurate than the colorimetric anthrone‐sulphuric acid method. Moreover, soil characteristics may influence the accuracy and precision of results depending on the hydrolysis procedure as it was shown by the soils rich in organic carbon and clay.     

Sugar analysis with the shaffer‐somogyi micro‐analysis,high performance liquid chromatography and enzymatic analysis in crop samples

Abstract

To evaluate the reliability of the Shaffer‐Somogyi (SS) micro‐analysis of reducing sugars, extracts of 14 dried crop samples were analyzed before and after hydrolysis in 0.05 N ^H ₂SO₄with this method, with High Performance Liquid Chromatography (HPLC) and with an enzymatic glucose and fructose assay. The values, obtained with the SS micro‐analysis were for many samples higher than those, obtained with HPLC, suggesting that other compounds than sugars, present in certain plant tissues, respond in this non‐specific method. Enzymatic analysis tended to give lower values for sugar content than HPLC. It is recommended, that routine analysis of crop samples with the SS micro‐analysis is preceeded by analysis with HPLC to assess the contribution of non‐sugars to the outcome of the former.     

Contribution of lignin and polysaccharides to the refractory carbon pool in C-depleted arable soils

We assessed the contribution of polysaccharides and lignin, major components of plant residues, to the refractory pool of soil organic carbon (SOC) in arable soils. Soil samples from two contrasting treatment types of European long-term agroecosystem experiments, i.e. conventionally managed (fertilized) and C-depleted plots, enriched in refractory compounds, were compared. Bulk samples from eight experimental sites and particle-size fractions of two of the sites were investigated. The CuO oxidation technique was used as a relative measure of lignin and its degree of structural alteration. The contents and composition of polysaccharides were determined following hydrolysis with trifluoroacetic acid (TFA). For the bulk samples, the amount of lignin phenols declined more than the total OC in the course of C-depletion. The contribution of lignin phenols to total OC was thus lower in the C-depleted versus the fertilized plots. A greater lignin biodegradation was found in the bulk samples of the depleted plots compared with the fertilized plots. The analysis of size fractions revealed lower OC-normalized contents of lignin phenols and a higher degree of lignin alteration in fractions <63 μm of the depleted versus the fertilized plots. These findings indicate that lignin does not accumulate within the refractory C pool of arable soils. The refractory SOC pool shows a lower contribution of lignin as compared with more labile fractions of SOC. If lignin-derived carbon is present in the stable pool it has been extensively modified so that it can no longer be identified as phenolic CuO oxidation products. OC-normalized contents of polysaccharides (neutral sugars and galacturonic acid) were similar in bulk samples of the C-depleted and fertilized plots. The contrasting treatments showed similar polysaccharide contents especially in separates <6 μm. The separates <6 μm in the C-depleted plots retained between 50 and 100% of the polysaccharide amounts in the fertilized plots. The mass ratio of (galactose+mannose)-to-(arabinose+xylose) (GM/AX) was higher in bulk samples of the C-depleted versus the fertilized plots, indicating a higher relative contribution of microbial sugars. Within a particular soil, the fine separates were those with the highest GM/AX ratio. These results indicate that the refractory C pool has a similar proportion of polysaccharides as the labile C pool, but refractory polysaccharides are mainly associated with fine separates and show a dominant contribution of microbial sugars. Our results provide evidence that polysaccharides, mainly those of microbial origin, are stabilized over the long-term within fine separates of arable soils. In contrast, CuO lignin is associated mainly with the coarse fractions and does not contribute to the refractory C pool.     

REVIEW: Developments in Our Understanding of Sorghum Polysaccharides and Their Health Benefits

The composition and structure of sorghum polysaccharides are remarkably similar to those in maize. Sorghum grain is rich in starch, cellulosic and noncellulosic polysaccharides (mainly glucuronoarabinoxylans [GAX]). Sorghum starch is similar to maize starch in terms of amylopectin, but the amylose may be more branched. This may account for sorghum starch having a generally slightly higher gelatinization temperature. The GAX in sorghum are highly substituted with glucuronic acid and arabinose, but the degree of these substitutions is lower when compared with maize GAX. Sorghum polysaccharides themselves are not sufficiently functional to allow the production of high‐quality baked goods. Sorghum has generally lower starch digestibility than maize. This is primarily due to the endosperm protein matrix, cell wall material, and tannins (if present) inhibiting enzymatic hydrolysis of the starch. Protein disulfide bond cross‐linking involving the kafirin prolamins in the protein matrix around the starch granules seems to be of major importance in reducing starch digestibility. It does not seem that sorghum polysaccharides, per se, have any unique health‐promoting effects. Any health‐promoting effects related to sorghum polysaccharides seem to be due to interactions between the polysaccharides and the endosperm matrix protein and phenolics.     

Changes in the chemical composition of soil organic matter after application of compost

Is the composition of soil organic matter changed by adding compost? To find out we incubated biowaste composts with agricultural soils and a humus‐free mineral substrate at 5°C and 14°C for 18 months and examined the products. Organic matter composition was characterized by CuO oxidation of lignin, hydrolysis of cellulosic and non‐cellulosic polysaccharides (CPS and NCPS) and ¹³C cross‐polarization magic angle spinning nuclear magnetic resonance (CPMAS ¹³C‐NMR) spectroscopy. The lignin contents in the compost‐amended soils increased because the composts contained more lignin, which altered little even after prolonged decomposition of the composts in soil. A pronounced decrease in lignin occurred in the soils amended with mature compost only. Polysaccharide C accounted for 14–20% of the organic carbon at the beginning of the experiment for both the compost‐amended soils and the controls. During the incubation, the relative contents of total polysaccharides decreased for 9–20% (controls) and for 20–49% (compost‐amended soils). They contributed preferentially to the decomposition as compared with the bulk soil organic matter, that decreased between < 2% and 20%. In the compost‐amended agricultural soils, cellulosic polysaccharides were decomposed in preference to non‐cellulosic ones. The NMR spectra of the compost‐amended soils had more intense signals of O–alkyl and aromatic C than did those of the controls. Incubation for 18 months resulted mainly in a decline of O–alkyl C for all soils. The composition of the soil organic matter after compost amendment changed mainly by increases in the lignin and aromatic C of the composts, and compost‐derived polysaccharides were mineralized preferentially. The results suggest that decomposition of the added composts in soil is as an ongoing humification process of the composts themselves. The different soil materials affected the changes in soil organic matter composition to only a minor degree.     

An automated anion-exchange chromatographic procedure for the estimation of saccharides in acid hydrolysates of soil

It is well known that the major neutral monosaccharide components released from soil by acid hydrolysis are glucose, galactose, mannose, arabinose, xylose, ribose, rhamnose and fucose. A colorimetric determination of the saccharide mixture released from soil is unsatisfactory for determining an accurate figure for soil saccharides. More precise information can be obtained by the determination of monosaccharides after separation by chromatography. Paper and thin-layer chromatography for quantitative analysis are rather time consuming and laborious. The gas chromatographic procedure was applied successfully for the analysis of sugars in soil hydrolysates by OADES et at. (7). Preparation of the various derivatives for gas chromatography still requires many steps, much handling of the sample, and considerable time, although final analysis of the product derivative is accomplished in an hour or two.     

Urea transformation in some tropical soils

The effects of incubation at 20°, 30° and 40°C and urea concentrations of 0, 50, 100 and 200 μg N/g soil on urea hydrolysis and nitrification were investigated in three Nigerian soils. At constant temperature urea hydrolysis and rate of NO₃^? accumulation increased with increasing rate of urea addition. Urea was rapidly hydrolyzed within 1 week of incubation. Nitrification in Apomu soil increased with increasing incubation temperature. Nitrification was slow in acid Nkpologu soil (pH 4.7). Texture, cation exchange capacity and C:N ratios of the soils were not related to urea hydrolysis or nitrification. Nitrite accumulation in these soils was insignificant. Soil pH was decreased by nitrification of hydrolyzed urea-N.     

Comparisons of soil organic matter and its fractions by pyrolysis mass-spectrometry

Pyrolysis mass-spectra from a sample of the A₁-horizon of a soil from southern Spain showed predominant peaks related to furan derivatives similar to those observed from complex polysaccharides in which not only hexoses but also pentoses and deoxyhexoses were constituent units. Smaller peaks, typical for protein materials and phenolic units, were also observed. On the other hand, typical peaks for the methoxyphenols of lignins were very small and indicated only limited amounts of undecomposed lignin residues in this soil sample. Peaks related to benzene or toluene were also very small.Humic acid samples from this soil showed much more prominent signals related to protein materials, benzene and phenolic derivatives and weaker polysaccharide-related signals than did the entire sample. Typical lignin related peaks were small or insignificant. Spectra from the grey or brown humidic acid fractions were much like those of the parent humic acid. Brown humic acid, however, showed stronger signals for nitrogen and sulphur compounds, indicating a higher content of protein-like materials in this fraction. Preparations of humic acid hydrolyzed by 6 N HCl showed in their pyrolysis products a marked increase in phenols and methoxyphenols.In its pyrogram, humin resembled humic acid, but signals for complex polysaccharides were more evident. Lignin-like materials seem not to be higher in this fraction. Hymatomelanic acid showed prominent signals related to polysaccharides and lignin. Pyrograms from the soil polysaccharides showed the characteristic pattern of a complex polysaccharide with the presence of fragments from polymers of amino acids or amino sugars. Fulvic acid spectra showed obvious dissimilarities to those from humic acid in that signals for protein, as well as those related to phenols, were low. Depending upon the isolation method, the fulvic acid preparations showed differing signals related to polysaccharide or phenolic materials.     

Decomposition and distribution of residual activity of some 13C-microbial polysaccharides and cells,glucose, cellulose and wheat straw in soil

Studies were made to determine the rate of decomposition of some ¹⁴C-labeled microbial polysaccharides, microbial cells, glucose, cellulose and wheat straw in soil, the distribution of the residual ¹⁴C in various humic fractions and the influence of the microbial products on the decomposition of plant residues in soil. During 16 weeks from 32 to 86 per cent of the C of added bacterial polysaccharides had evolved as ¹⁴CO₂. Chromobacterium violaceum polysaccharide was most resistant and Leuconostoc dextranicus polysaccharide least resistant. In general the polysaccharides, microbial cells, and glucose exerted little effect on the decomposition of the plant products. Upon incubation the ¹⁴C-activity was quickly distributed in the humic. fulvic and extracted soil fractions. The pattern of distribution depended upon the amendment and the degree of decomposition. The distribution was most uniform in the highly decomposed amendments. After 16 weeks the bulk of the residual activity from Azotobacter indicus polysaccharide remained in the NaOH extracted soil. From C. violaceum polysaccharide both the extracted soil and the humic acid fraction contained high activity. About 50–80 per cent of the residual activity from the ¹⁴C-glucose, cellulose and wheat straw amended soils could be removed by hydrolysis with 6 n HCl. The greater part of this activity in the humic acid fraction was associated with the amino acids and that from the fulvic acids and residual soils after NaOH extraction with the carbohydrates. About 8 16 per cent of the activity of the humic acid fraction was present in substances (probably aromatic) extracted by ether after reductive or oxidative degradation.     

Temporal responses of soil microorganisms to substrate addition as indicated by amino sugar differentiation

Amino sugars are one of the important microbial residue biomarkers which are associated with soil organic matter cycling. However, little is known about their transformation kinetics in response to available substrates because living biomass only contributes a negligible portion to the total mass of amino sugars. By using ¹⁵N tracing technique, the newly synthesized (labeled) amino sugars can be differentiated from the native portions in soil matrix, making it possible to evaluate, in quantitative manner, the transformation pattern of amino sugars and to interpret the past and ongoing changes of microbial communities during the assimilation of extraneous ¹⁵N. In this study, laboratory incubations of soil samples were conducted by using ¹⁵NH₄⁺ as nitrogen source with or without glucose addition. Both the ¹⁵N enrichment (expressed as atom percentage excess, APE) and the contents of amino sugars were determined by an isotope-based gas chromatography-mass spectrometry. The significant ¹⁵N incorporation into amino sugars was only observed in glucose plus ¹⁵NH₄⁺ amendment with the APE arranged as: muramic acid (MurN) > glucosamine (GlcN) > galactosamine (GalN). The dynamics of ¹⁵N enrichment in bacterial-derived MurN and fungal-derived GlcN were fitted to the hyperbolic equations and indicative for the temporal responses of different soil microorganisms. The APE plateau of MurN and fungal-derived GlcN represented the maximal extent of bacterial and fungal populations, respectively, becoming active in response to the available substrates. The different dynamics of the ¹⁵N enrichment between MurN and GlcN indicated that bacteria reacted faster than fungi to assimilate the labile substrates initially, but fungus growth was dominant afterward, leading to integrated microbial community structure over time. Furthermore, the dynamics of labeled and unlabeled portions of amino sugars were compound-specific and substrate-dependent, suggesting their different stability in soil. GlcN tended to accumulate in soil while MurN was more likely degraded as a carbon source when nitrogen supply was excessive.     

Free amino sugar reactions in soil in relation to soil carbon and nitrogen cycling

Amino sugars represent a major constituent of microbial cell walls and hydrolyzed soil organic matter. Despite their potential importance in soil nitrogen cycling, comparatively little is known about their dynamics in soil. The aim of this study was therefore to quantify the behaviour of glucosamine in two contrasting grassland soil profiles. Our results show that both free amino sugars and amino acids represented only a small proportion of dissolved organic N and C pool in soil. Based upon our findings we hypothesize that the low concentrations of free amino sugars found in soils is due to rapid removal from the soil solution rather than slow rates of production. Further, we showed that glucosamine removal from solution was a predominantly biotic process and that its half-life in soil solution ranged from 1 to 3 h. The rates of turnover were similar to those of glucose at low substrate concentrations, however, at higher glucosamine concentrations its microbial use was much less than for glucose. We hypothesized that this was due to the lack of expression of a low affinity transport systems in the microbial community. Glucosamine was only weakly sorbed to the soil's solid phase (K_d=6.4±1.0) and our results suggest that this did not limit its bioavailability in soil. Here we showed that glucosamine addition to soil resulted in rapid N mineralization and subsequent NO₃⁻ production. In contrast to some previous reports, our results suggest that free amino sugars turn over rapidly in soil and provide a suitable substrate for both microbial respiration and new biomass formation.     

Effect of germination on the carbohydrate composition of the dietary fiber of peas (Pisum sativum L.)

The effect of different conditions of pea germination on dietary fiber (DF) composition was studied. Insoluble dietary fiber (IDF) and soluble dietary fiber (SDF) were subjected to acid hydrolysis, and the resultant neutral sugars, uronic acids, and Klason lignin were quantified. Germinated peas exhibited significantly higher contents of total dietary fiber (TDF) than the raw sample, due to the increases of both DF fractions. Under darkness conditions, germination exhibited the highest contents of IDF and SDF. Decreasing IDF/SDF ratios showed that the carbohydrate changes did not take place to the same extent during germination, the SDF fraction being the most affected. The detailed chemical composition of fiber fractions reveals increases of cellulose in the IDF of germinated samples, whereas SDF exhibits a decrease of pectic polysaccharides and also increases of polysaccharides rich in glucose and mannose. The DF results were corroborated by a comparative examination of the cell wall carbohydrate composition.