Evaluation of sea lice abundance levels on farmed Atlantic salmon (Salmo salar L.) located in the Broughton Archipelago of British Columbia from 2003 to 2005

Salmon farming began in British Columbia (BC) in the 1970s and in 2006, aquaculture represented BC's largest agricultural export. Along with this growth in production has been a growth in controversy, including the concern that sea lice originating from Atlantic salmon farms negatively impact wild juvenile pink salmon in the Broughton Archipelago. To understand the dynamic interaction between wild and farmed fish, data for on‐farm abundance of sea lice are required. In this study, 33 000 Atlantic salmon from 20 active farms were examined over 3 years. Two species of lice were found: Lepeophtheirus salmonis and Caligus clemensi. Inter‐annual and seasonal variations in abundance levels occurred with lower levels of L. salmonis in 2003 compared with 2004 and 2005, while C. clemensi levels were highest in 2003. The abundance of L. salmonis was greater on older farmed fish. The findings are compared with European and eastern Canadian sea lice reports, and possible sources of sea lice on farmed salmon are discussed.     

Parasites and hepatic lesions among pink salmon, Oncorhynchus gorbuscha (Walbaum), during early seawater residence

Juvenile pink salmon, Oncorhynchus gorbuscha (Walbaum), in the Broughton Archipelago region of western Canada were surveyed over 2 years for sea lice (Lepeophtheirus salmonis and Caligus clemensi), gross and microscopic lesions and evidence of infections with viruses and bacteria. The 1071 fish examined had an approximate ocean residence time no longer than 3 months. A high prevalence of degenerative liver lesions, renal myxosporean parasites and a low prevalence of skin lesions and sea lice were observed. No indications of viral or bacterial diseases were detected in either year. The monthly prevalence of sea lice in 2007 (18-51%) was higher than in 2008 (1-26%), and the infestation density exceeded the lethal threshold in only two fish. Degenerative hepatic lesions and renal myxosporean parasites occurred in approximately 40% of the pink salmon examined in June of both years, and the peak monthly prevalence of hepatocellular hydropic degeneration was greater in 2007 (32%, in May) than in 2008 (12%, in June). Logistic regression analysis found skin lesions and hepatocellular hydropic degeneration significantly associated with sea lice. Most parasites and lesions occurred during both years, but the prevalence was often higher in 2007. Fish weight was 35% less in June 2007 than in June 2008, but condition factor was not different. Further research is required to monitor inter-annual variations and aetiology of the liver lesions and to assess their potential role on pink salmon survival.     

Copepods and salmon: characterizing the spatial distribution of juvenile salmon along the Washington and Oregon coast,USA

Yearling Chinook (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) were sampled concurrently with physical variables (temperature, salinity, depth) and biological variables (chlorophyll a concentration and copepod abundance) along the Washington and Oregon coast in June 1998–2008. Copepod species were divided into four different groups based on their water‐type affinities: cold neritic, subarctic oceanic, warm neritic, and warm oceanic. Generalized linear mixed models were used to quantify the relationship between the abundance of these four different copepod groups and the abundance of juvenile salmon. The relationships between juvenile salmon and different copepod groups were further validated using regression analysis of annual mean juvenile salmon abundance versus the mean abundance of the copepod groups. Yearling Chinook salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with cold neritic copepods, subarctic copepods, and chlorophyll a concentration. The selected habitat variables explained 67% of the variation in yearling Chinook abundance. Yearling coho salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with temperature. The selected habitat variables explained 40% of the variation in yearling coho abundance. Results suggest that copepod communities can be used to characterize spatio‐temporal patterns of abundance of juvenile salmon, i.e., large‐scale interannual variations in ocean conditions (warm versus cold years) and inshore‐offshore (cross‐shelf) gradients in the abundance of juvenile salmon can be characterized by differences in the abundance of copepod species with various water mass affinities.     

Spatial distribution of ocean habitat of yearling Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon off Washington and Oregon,USA

We determined the habitat usage and habitat connectivity of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in continental shelf waters off Washington and Oregon, based on samples collected every June for 9 yr (1998–2006). Habitat usage and connectivity were evaluated using SeaWiFS satellite‐derived chlorophyll a data and water depth. Logistic regression models were developed for both species, and habitats were first classified using a threshold value estimated from a receiver operating characteristic curve. A Bernoulli random process using catch probabilities from observed data, i.e. the frequency of occurrence of a fish divided by the number of times a station was surveyed, was applied to reclassify stations. Zero‐catch probabilities of yearling Chinook and yearling coho salmon decreased with increases in chlorophyll a concentration, and with decreases in water depth. From 1998 to 2006, ～ 47% of stations surveyed were classified as unfavorable habitat for yearling Chinook salmon and ～ 53% for yearling coho salmon. Potentially favorable habitat varied among years and ranged from 9 856 to 15 120 km² (Chinook) and from 14 800 to 16 736 km² (coho). For both species, the smallest habitat area occurred in 1998, an El Niño year. Favorable habitats for yearling Chinook salmon were more isolated in 1998 and 2005 than in other years. Both species had larger and more continuous favorable habitat areas along the Washington coast than along the Oregon coast. The favorable habitats were also larger and more continuous nearshore than offshore for both species. Further investigations on large‐scale transport, mesoscale physical features, and prey and predator availability in the study area are necessary to explain the spatial arrangement of juvenile salmon habitats in continental shelf waters.     

Modelling sea lice dispersion under varying environmental forcing in a Scottish sea loch

The spread of infectious larval sea lice, Lepeophtheirus salmonis (Krøyer, 1838), between wild salmonids and farmed Atlantic salmon, Salmo salar , remains a contentious area of uncertainty. However, as laboratory and field experiments increase our knowledge of sea lice behaviour under environmental forcing, numerical modelling tools can be used to predict the spread of infectious sea louse larvae from a point source. A three-dimensional numerical model has been developed and recently validated within Loch Torridon, a fjordic sea loch on the west coast of Scotland. Output from the numerical model is used to drive a particle tracking model which follows statistical representations of sea lice through the planktonic stages of a louse life cycle. By including maturation and mortality, the models can be used to predict the dispersion and transport of infectious sea lice from a point source and can be used to produce maps of infectivity under varying environmental conditions. Results highlight the importance of the wind-driven circulation for larval lice transport and suggest that local environmental conditions have considerable impact on the probability of sea lice infection spreading between wild and farmed fish populations.     

A review of the use of ivermectin as a treatment for sea lice [Lepeophtheirus salmonis (Krøyer) and Caligus elongatus Nordmann] infestation in farmed Atlantic salmon (Salmo salar L.)

Ectoparasitic sea lice, Lepeophtheirus salmonis (Krøyer) and Caligus elongatus (Nordmann) browse on the skin of farmed Atlantic salmon, Salmo salar L.. The resulting lesions cause stress and increase the susceptibility of the fish to secondary infections. In extreme infestations, fish can suffer from osmoregulatory failure and death. The most immediate treatment for the relief of sea lice infestations at fish farms is the use of chemotherapeutants, either by bath or oral administration. One compound which has been investigated for use as a chemotherapeutant is ivermectin. Ivermectin is a member of the avermectin group of macrocyclic lactones. The avermectins are neurotoxins, which have been used successfully in the treatment of helminthic parasitic infections in a number of terrestrial farm animals and also in the treatment of river blindness in humans. Owing to the low solubility of the compound, ivermectin has been administered as an oral treatment with the feed and has been found to be effective for the treatment of sea lice on Atlantic salmon. Ivermectin is poorly absorbed by fish with a high percentage of the administered dose being excreted in the faeces. The highest concentrations of the absorbed ivermectin were found in lipid‐rich organs. The ivermectin remained in the tissues of the treated fish for a prolonged period of time and was excreted mainly in the unchanged form. Ivermectin can reach the marine environment via excretion from the bile, unabsorbed via the fish faeces and by uneaten food pellets and has a strong affinity to lipid, soil and organic matter. Risk assessments have shown that ivermectin is likely to accumulate in the sediments and that the species therein would be more at risk than the species in the pelagic environment. Ivermectin has been shown to be toxic to some benthic infaunal species in single species tests, but there is no evidence that treatment of fish with ivermectin has affected multispecies benthic communities in the field situation. This review paper ends with details of the development and the status of the use of ivermectin in the treatment of sea lice infestations at Scottish fish farms.     

Sea lice infestation rates on wild and escaped farmed Atlantic salmon (Salmo salar L.) entering the Magaguadavic River, New Brunswick

A monitoring program for the prevalence and intensity of sea lice infestations of wild and escaped farmed salmon has been underway on the Magaguadavic River since 1992. Fish are screened in a fish ladder trap located in freshwater a short distance above the head of tide. No trends with time were evident in observed sea lice burdens, and in all years the majority of salmon, both wild and escapees, had no or low levels of infestation with sea lice. In the spring of 2002, 23 landlocked salmon moving to sea from the Magaguadavic River were acoustically tagged. Two fish returned to the river after a brief period of residence in Passamaquoddy Bay, with significant dermal damage from sea lice. These fish were tracked to areas close to commercial salmon farms.     

The epidemiology of the sea lice, Caligus elongatus Nordmann, in marine aquaculture of Atlantic salmon, Salmo salar L., in Scotland

Although Caligus elongatus is one of two major species of sea lice that parasitize farmed salmon, its epidemiology has not been extensively studied. In this communication, the abundances of the adult stage of C. elongatus in salmon populations from 33 farms in the West of Scotland between 1997 and 2000 have been analysed for evidence of seasonal and annual patterns. The findings indicate that the pattern of C. elongatus is remarkably consistent from year to year, and directly opposed to that reported for Lepeophtheirus salmonis, the other major caligid species. In particular, adult infestations rapidly increase from the start of July each year, and are more prevalent on salmon in the first year of production than the second year. Treatment is seen to have an effect on levels of infestation but it is not clear why this species should have significantly lower levels of abundance in the second year of production. There is also evidence that fallowing has no effect on abundance. Strategic management programmes for the control of sea lice on salmon farms, which are increasingly effective in controlling L. salmonis , may also have to give greater consideration to C. elongatus .     

An assessment of salmon farms and wild salmonids as sources of Lepeophtheirus salmonis (Krøyer) copepodids in the water column in Loch Torridon, Scotland

Wild salmonids and farmed salmon can both be sources of Lepeophtheirus salmonis (Krøyer, 1838) larvae . Farmed salmon smolts free of L. salmonis infections are stocked in sea cages and may subsequently contract L. salmonis infections, probably from wild fish. The contribution of gravid L. salmonis at Atlantic salmon, Salmo salar L., farms to populations of L. salmonis larvae in the water column has in the past been based on estimated parameters, such as louse fecundity. This present study augments these calculations by combining empirical data on densities of infective L. salmonis copepodids in the field with estimates of the number of gravid L. salmonis on farmed and wild salmonids in Loch Torridon. Data collected between 2002 and 2007 show a significant correlation between mean densities of L. salmonis copepodids recovered in the water column and the numbers of gravid L. salmonis at the local salmon farms. Generally, the farms with greatest numbers of salmon were observed to have stronger correlations with densities of copepodids in the water than the farms with fewer fish. The study suggests that louse management approaches, e.g. treatment trigger levels, need to take account of individual farm biomass, or numbers of fish. This study highlights the importance of control of L. salmonis on salmon farms for the co-existence of both wild salmonid populations and the aquaculture industry.     

A note on sea lice abundance on farmed Atlantic salmon in Scotland 2011–2013: significant regional and seasonal variation

Sea lice are the most economically damaging parasite affecting marine Atlantic salmon production the dominant sector of UK aquaculture. The Scottish Salmon Producers' Organisation has published mean adult female lice abundance for four regions for 2011–2013 and for 30 areas in 2013. An analysis of these data shows that sea lice abundance is highly seasonal with values lowest in the first half of the year. Abundance also varies by region, the regional patterns vary from year‐to‐year but overall the highest abundance was found in the northern part of mainland Scotland. While most areas had low lice abundance, in a few areas the abundance was persistently above average; these areas were clustered together. There was no significant year‐on‐year trend in lice abundance, and trends appear to vary between regions. Although previous Scottish analyses have been carried out using data from a large company, this analysis cover 95% of production in all salmon farming regions of Scotland and it can be extended as more data become available.     

Observations on open-water densities of sea lice larvae in Loch Shieldaig, Western Scotland

Sea trout (Salmo trutta L.) stocks on the West Coast of Scotland and Ireland have decreased due to reduced survival during the marine phase of their life cycle. Lice‐infested sea trout returning to rivers could indicate that parasite burdens are contributing to the decline. Salmon farms represent a potential source of substantial quantities of sea lice, leading to a conjectured link between parasites on salmon fish farms and infestations on wild sea trout. To investigate the potential infective pressure on sea trout in Loch Shieldaig, offshore and sub‐littoral plankton samples were collected and analysed for sea lice nauplius and copepodid stages. During the plankton survey, numbers of sea lice on a fish farm in the loch reached a maximum in November 2001. Soon after, numbers of sea lice larvae peaked in open‐water samples and then in sub‐littoral samples. Nauplii were found adjacent to the farm and occurred less elsewhere. This study reports a concentration of sea lice larvae at the head of Loch Shieldaig and indicates a possible relationship between sea lice numbers on the fish farm and lice larvae densities in the open‐water of the loch and in the sub‐littoral zone.     

Distributions of planktonic sea lice larvae Lepeophtheirus salmonis in the inter-tidal zone in Loch Torridon, Western Scotland in relation to salmon farm production cycles

This study examines the relative density of sea lice, Lepeophtheirus salmonis (Krøyer), larvae in the inter‐tidal areas of Loch Torridon, a fjordic sea loch in Western Scotland and the site of several commercial salmon farms. Samples of planktonic sea lice were collected in each spring from 1999 to 2003 near the mouth of the River Shieldaig, where sea trout have been shown to congregate in the first few days after going to sea, and from 2001 to 2003 near the mouth of the River Balgy. No larval sea lice were found near the mouth of the River Shieldaig in spring 2000 or 2002, when gravid female sea lice were absent on local fish farms. The same finding was observed in 2002 at the mouth of the River Balgy. In springs of 1999, 2001 and 2003, peak densities of larval sea lice of 33, 94 and 143 m^?3, respectively, were observed at the mouth of the river Shieldaig. At the mouth of the River Balgy, peak densities of 74 and 78 lice m^?3 were observed in 2001 and 2003 respectively. At the time these samples were collected, the two local salmon farms were in the second year of their production cycle and gravid female sea lice were present. Samples of larval sea lice were also obtained year round, at approximately weekly intervals, from a 50‐m transect at the mouth of the River Shieldaig, from March 2001 to June 2003, and compared with frequencies of gravid female sea lice on the two local salmon farms. High levels were found in the winter. No planktonic sea lice were found in this transect when gravid females were not present on the local fish farms.     

Where art thou louse? A snapshot of attachment location preferences in salmon lice on Atlantic salmon hosts in sea cages

Problematic sea lice infestations on farmed Atlantic salmon (Salmo salar) have motivated extensive research and development into new methods to prevent, monitor and control sea lice. Most of these technologies require detailed information on the behaviour, spatial distribution and demography of lice on host fish. This study investigated how salmon lice (Lepeophtheirus salmonis) infestation density varies across the host's surface under sea cage farming conditions. Lice abundance, demography and attachment location were tracked over time, with repeated sampling of 300 individually tagged salmon across three replicate experimental sea cages. The data reveal clear differences in attachment locations according to sex and stage, but with an overall preference for the dorsal surface among mobile stages—dorsal head for adult females and dorsal-posterior section for males and pre-adults. Total lice abundance was highly variable between repeated measures of individual fish, consistent with frequent host-switching or mortality. Total lice numbers also declined between sampling dates, likely due to handling, with lost mobile lice being almost exclusively adult males. As the distribution of sea lice on hosts is likely determined by numerous factors, future image-based automated detection systems should be validated in settings that reflect the complex host–parasite interactions that occur in open farming systems.     

Relationship between sea lice levels on sea trout and fish farm activity in western Scotland

The relationship between aquaculture and infestations of sea lice on sea trout, Salmo trutta L., is controversial. Here, the association between sea lice infestations on wild sea trout and characteristics of local Atlantic salmon, Salmo salar L., farms were investigated using data collected on the Scottish west coast. The proportion of sea trout with louse burdens above a critical level was positively related to the fork length of the sea trout and the mean weight of salmon on the nearest fish farm, and negatively related to the distance to that farm. The distance to the nearest fish farm did not influence the probability of infestations above the critical level beyond 31 km although there was considerable uncertainty around this cut‐off distance (95% limits: 13–149 km). The results support a link between Atlantic salmon farms and sea lice burdens on sea trout in the west of Scotland and provide the type of information required for marine spatial planning.     

Early development of resistance to the salmon louse, Lepeophtheirus salmonis (Krøyer), in juvenile pink salmon, Oncorhynchus gorbuscha (Walbaum)

This study examined the effect of fish weight on the susceptibility of post-emergent pink salmon to Lepeophtheirus salmonis (Krøyer). Three trials were conducted, each with two stocks of pink salmon, Oncorhynchus gorbuscha (Walbaum), at starting weights of c . 0.3, 0.7 and 2.4 g, respectively. In each trial, duplicate tanks of fish were exposed to 0, 25 (only in Trial 1), 50 or 100 copepodids per fish. Mortality in Trial 1 was c . 37%, regardless of stock following exposures to 50 or 100 copepodids. Mortalities occurred up to 26 days after exposure, and more than 80% of the lice on the dead fish were chalimus stages. Infections with adult or preadult lice were observed on c . 35% of fish surviving to 37 days after exposure. Mortality was 5% in Trial 2 and there was no mortality in Trial 3. The abundance of L. salmonis was lower in Trial 3 compared with Trials 1 or 2. Histological changes in the skin coincident with fish growth included a thickening of the epidermis, infiltration of the dermis with fibroblasts by the end of Trial 1 and the first evidence of scales by the end of Trial 2; scales were evident throughout Trial 3. These results showed that the previously reported innate resistance to L. salmonis displayed by pink salmon develops in fish heavier than 0.3 g and appears to be functional by 0.7 g. This resistance coincided with changes to the epidermis and dermis, including the formation of scales. The present results indicate that elevated risk associated with L. salmonis infection among migrating post-emergent pink salmon may occur during a relatively brief period before the fish reaches 0.7 g.     

Sea lice treatments, management practices and sea lice sampling methods on Atlantic salmon farms in the Bay of Fundy, New Brunswick, Canada

Proper monitoring of all stages of sea lice is imperative to ensure the strategic timing of treatments. Although sea lice receive close attention and management for production purposes, there are no regulations for the reporting of lice burdens on salmon farms in Atlantic Canada, nor are there officially standardized protocols for conducting sea lice counts in the field. The purpose of this study was to complete a survey of Atlantic salmon farms in the Bay of Fundy, NB, Canada. The survey addressed many aspects of sea lice monitoring and control, including methods for sea lice sampling at the site, types of treatments administered for control of sea lice and management practices and decisions regarding the control of sea lice. A total of 83 surveys were completed from July to December 2002. Twelve of the 60 respondents owned and/or operated more than one site and completed a survey for each of their sites at the time of the interview. The position of individuals surveyed included 48 site managers (representing 63 sites), three site owners (representing 11 sites), eight individuals who were both owner and manager (representing nine sites) and one site veterinarian (representing one site). Surveys were completed on 30 sites from the Limekiln Bay and surrounding areas, 23 sites from Grand Manan Island, 18 sites from Deer Island, six sites from Campobello Island and six sites from Passamaquoddy Bay. Fish farmers, in concert with their veterinarians, generally perform intensive monitoring and control practices. However, there is a continued reliance on emamectin benzoate (SLICE^®) for sea lice control on Atlantic salmon farms in the Bay of Fundy, which raises concerns regarding the potential for sea lice to develop resistance to the drug.     

Food habits and marine survival of juvenile Chinook and coho salmon from marine waters of Southeast Alaska

Little is known about the food habits of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in marine environments of Alaska, or whether their diets may have contributed to extremely high marine survival rates for coho salmon from Southeast Alaska and much more modest survival rates for Southeast Alaskan Chinook salmon. To address these issues, we documented the spatial and temporal variability of diets of both species collected from marine waters of Southeast Alaska during summers of 1997–2000. Food habits were similar: major prey items of both species included fishes, crab larvae, hyperiid amphipods, insects, and euphausiids. Multivariate analyses of diet composition indicated that the most distinct groups were formed at the smallest spatial and temporal scales (the haul), although groups also formed at larger scales, such as by month or habitat type. Our expectations for how food habits would influence survival were only partially supported. As predicted, Southeast Alaskan coho salmon had more prey in their stomachs overall [1.8% of body weight (BW)] and proportionally far fewer empty stomachs (0.7%) than either Alaskan Chinook (1.4% BW, 5.1% empty) or coho salmon from other regions. However, contrary to our expectations, coho salmon diets contained surprisingly few fish (49% by weight). Apparently, Alaskan coho salmon achieved extremely high marine survival rates despite a diet consisting largely of small, less energetically‐efficient crustacean prey. Our results suggest that diet quantity (how much is eaten) rather than diet quality (what is eaten) is important to marine survival.     

Differences in Lepeophtheirus salmonis abundance levels on Atlantic salmon farms in the Broughton Archipelago, British Columbia, Canada

Sea lice data collected from Atlantic salmon farms in the Broughton Archipelago between 2003 and 2005 were examined for inter-regional differences in mobile Lepeophtheirus salmonis (Krøyer) abundance using the generalized linear model procedure. Factors such as age of the salmon populations, location of farms and time of year had a significant effect on the abundance of the mobile stages of L. salmonis whereas water temperature and salinity did not. Separate evaluation of SLICE® treatment data found no significant difference in treatment frequency among the areas but did show that there were significantly lower numbers of farm treatments during the summer months when compared with other seasons. The role of environment and wild fish in influencing sea lice abundance on the farmed salmon is discussed. The findings suggest that effective management programmes for sea lice should not only be based on geographical location but should take into account other factors which could influence lice abundance levels.     

Modelling salmon lice,Lepeophtheirus salmonis,reproduction on farmed Atlantic salmon,Salmo salar L

The aim of this study was to model sea lice levels and the effect on reproduction by a stochastic simulation model and to evaluate the uncertainty of lice estimates based upon counts. Two empirical data sets were examined to parameterize the models. An overall fit of the data to the Poisson distribution was found and thus was used as the base of the stochastic models. In the model, salmon lice reproduction is not linear with the number of adult females and at low lice loads a smaller proportion of the adult female lice will reproduce. Depending on the variance structure, it was estimated that between 40% and 60% of the adult female lice will reproduce at an abundance of 0.5 adult females per fish. Lice counts, especially when examining few fish at low lice loads, are uncertain and at a true abundance of 0.1 one may count between 0 and 5 lice when examining 10 fish. Understanding the dynamics of sea lice reproduction is a key factor in the development of sustainable control strategies.