Traits associated with dry edible bean (Phaseolus vulgaris L.) productivity under diverse soil moisture environments

Two experiments were conducted in the Rift Valley, Ethiopia (8°N and 39°E) to determine associations between eight plant traits and seed yield, and to obtain estimates of narrow sense heritability for the traits. Experiment I evaluated seven dry edible bean cultivars/lines at two locations to simulate different soil moisture stress, including, Debre Zeit(non-stress) and Dera (moderate-stress). Experiment II evaluated 25 cultivars/lines in three environments including, Melkassa early planted (non-stress), Melkassa late planted (high-stress), and Dera (moderate-stress). A randomized-complete-block design with three replicates was used in both experiments. Plant traits evaluated were seed yield, pods plant^-1, seeds pod^-1, 100 seed weight, root dry weight, hypocotyl diameter, plant biomass, plant height and days to flowering. Plant traits that were significantly associated with seed yield were included in a stepwise-regression model to determine which trait or combination of traits provided the best model to estimate seed yield in each environment. An analysis of variance was conducted to test main effects and interactions between plant traits and environments. Significant variation among lines occurred for seed yield and all plant traits in both experiments. Strong positive correlations were observed between plant biomass and seed yield in all environments. Seed yield and pods plant^-1 were also highly associated in four of the five environments. Stepwise regression models indicated that the combination of pods plant^-1 and plant biomass consistently contributed to seed yield prediction, while other traits did not. Because both plant biomass and pods plant^-1 had moderate to high narrow sense heritability estimates and low GE interactions, they should be useful as indirect selection criteria to improve and stabilize seed yield in a breeding program. This revised version was published online in July 2006 with corrections to the Cover Date.     

Combining ability for nodulation in common bean (Phaseolus vulgaris L.) genotypes from Andean and Middle American gene pools

Ten F₁'s obtained from crosses among five common bean genotypes of Andean (WAF 15, Mineiro Precoce and Batatinha) and Middle American (BAT 304 and Ouro) gene pools were assessed for their combining abilities for root nodulation with Rhizobium tropici strain CIAT 899. The plants were grown under controlled conditions and evaluated for number of nodules per plant (NN), nodule dry weight (NDW), mean nodule weight (MNW) and plant fresh weight (PFW). The subdivision of the treatment effects on the general (GCA) and specific combining effects (SCA) were performed according to Griffing's diallel analysis method 2, model 1. The analyses of variance and estimates of quadratic components showed that non-additive gene effects were more important in the expression of NN and PFW, whereas additive gene effect was predominant for NDW and MNW. A close association was observed between high number of nodules and GCA. Generally, crosses involving parents of different gene pools yielded hybrids with high positive estimates of SCA for all assessed traits. The genotypes of Andean origin WAF 15 and Mineiro Precoce are the most promising parents for breeding programs to increase NN and NDW in common beans. This revised version was published online in July 2006 with corrections to the Cover Date.     

Inheritance of root traits and phosphorus uptake in common bean (Phaseolus vulgaris L.) under limited soil phosphorus supply

Heterosis is an important way to improve yield and quality for many crops. Hybrid rice and hybrid maize contributed to enhanced productivity which is essential to supply enough food for the increasing world population. The success of hybrid rice in China has led to a continuous interest in hybrid wheat, even when most research on hybrid wheat has been discontinued in other countries for various reasons including low heterosis and high seed production costs. The Timopheevii cytoplasmic male sterile system is ideal for producing hybrid wheat seeds when fertility restoration lines with strong fertility restoration ability are available. To develop PCR-based molecular markers for use in marker-assisted selection of fertility restorer lines, two F₂ populations derived from crosses R18/ND36 and R9034/ND36 were used to map fertility restoration genes in the two elite fertility restorer lines (R-lines) R18 and R9034. Over 678 SSR markers were analyzed, and markers closely linked to fertility restoration genes were identified. Using SSR markers, a major fertility restoration gene, Rf3, was located on the 1B chromosome in both populations. This gene was partially dominant in conferring fertility restoration in the two restorer lines. SSR markers Xbarc207, Xgwm131, and Xbarc61 are close to this gene. These markers may be useful in marker-assisted selection of new restorer lines with T. timopheevii cytoplasm. Two minor QTL conferring fertility restoration were also identified on chromosomes 5A (in R18) and 7D (in R9034) in two R-lines.     

Male sterility in beans (Phaseolus vulgaris L.)

Summary Male sterile bean plants were discovered at Embu Agricultural Research Station, Kenya. The character is controlled by one recessive gene.The Grain Legume Project is a joint project of the Kenya Ministry of Agriculture and The Netherlands Ministry of Foreign Affairs.     

Growth analysis in a reduced leaf mutant of common bean (Phaseolus vulgaris L.)

Summary A comparison between the Royal Red bean variety and a reduced leaf mutant on the basis of growth indices is reported. The mutants has lower leaf area index (LAI) and leaf area duration (LAD) (–43.7%), higher specific leaf weight (SLW) (on the mean +33.3%) and accumulates less dry matter (–7.7%) than the normal genotype. When the net assimilation rate (NAR) is considered, the mutant is superior to the normal (+62.3%). It is concluded that the unit area of the mutant leaves accumulates dry matter more efficiently than that of the corresponding normal variety.     

Genetic control of low temperature tolerance in germination of the common bean (Phaseolus vulgaris L.)

Summary Cultivars tolerant to low temperature during the germination and emergence stages and carriers of the grain quality standards demanded by consumers are needed to increase the success of irrigated common bean in Southern Minas Gerais State. To study the genetic mechanisms controlling these traits and assess the possibility of generating the desirable materials, a diallel cross involving ten cultivars including introductions and pure lines from the breeding program of ESAL was carried out. Speed of germination of the F₂ generation from the crosses was assessed under laboratory conditions at 12°C. The diallel analysis was carried out using Griffing's method IV (1956) and predictions of the cross potential were made by the methodology developed by Jinks & Pooni (1986). The results indicated that the parents differed in germination speed at low temperatures with Small White, A-488 and Rio Vermelho being the most tolerant and Carioca, ESAL 591 the most sensitive. No effect of the reciprocal crosses was observed either for germination percentage or germination speed. The parents A-488, Small White and Rio Vermelho showed the greatest general combining ability. Additive genetic effects predominated for both traits. Our results suggest that cold tolerance can be bred successfully into commercially acceptable cultivars.     

The estimation of cross yield using early generation and parental yields in dry beans (Phaseolus vulgaris L.)

Summary The relationship between the yield potential of crosses for several generations and the yield of either the parental varieties or early segregating generations was studied. It was found that if plants were grown at crop densities then a high degree of prediction of cross potential was possible independent of year or generation. Prediction was much less efficient however if either the parents or the early generations were grown as spaced plants. It is concluded that at crop densities an accurate assessment of parental yields is sufficient to determine which crosses are most likely to have a high yield potential and that if any cross proves to be low yielding in early generations it may safely be rejected without fear of losing potentially high yielding crosses. Reasons for the failure of predictions, as reported in the literature, are discussed.     

Inheritance of resistance to angular leaf spot (Isariopsis griseola Sacc.) in french bean (Phaseolus vulgaris L.)

Summary Angular leaf spot (Isariopsis griseola Sacc.) is a serious disease of French bean in the hills of India and 40 to 70 per cent of the green pods are damaged and rendered unmarketable. Crosses were made between PLB 257, (Phaseolus coccineus L.), a red flowering pole tope, resistant to angular leaf spot, and Contender (Phaseolus vulgaris L.), a highly susceptible commercial cultivar. Studies of the F₁, F₂, and F₃ progenies indicated that PLB 257, carries a recessive gene imparting resistance to angular leaf spot.     

Yield stability in common bean (Phaseolus vulgaris L.) genotypes

An experiment was undertaken to determine the stability of seed yield in 21 common bean genotypes representing three growth habits. Seven genotypes in each growth habit (determinate bush, indeterminate bush and indeterminate prostrate) were evaluated in replicated trials at three locations for three years under rain fed conditions in Ethiopia. A combined analysis of variance, stability statistics and rank correlations among stability statistics and yield-stability statistic were determined. The genotypes differed significantly for seed yield and genotype × environment (year by location) interaction (GE). The different stability statistics namely Type1, Type 2 and Type 3 measured the different aspects of stability. This was substantiated by rank correlation coefficient. There were strong rank correlations among S_i ²d, W_i ²,σ_i ² and S_i ², where as there was weak correlation between b_iand R_i ², S_i ²d, W_i ², σ_i ² and S_i ². R² was significantly and negatively correlated with W_i ², σ_i ² and S_i ². σ_i ² is significantly correlated with W_i ².Yield is significantly correlated with b_i and R_i ².None of the statistics per se was useful for selecting high yielding and stable genotypes except the YS(yield-stability statistic). Most of the high yielding genotypes were relatively stable. Of the 21 genotypes, only 11genotypes were selected for their high yielding and stable performance. Genotypes with growth habit III and I (in determinate prostrate and determinate bush) were generally more stable than in determinate bush. This revised version was published online in July 2006 with corrections to the Cover Date.     

Inheritance of temperature sensitivity of the photoperiod response in common bean (Phaseolus vulgaris L.)

Summary Photoperiod response of flowering in common bean (Phaseolus vulgaris L.) is thought to be controlled by the genes Ppd and Hr. However, cultivars also vary in the degree that cooler temperatures reduces their sensitivity to photoperiod. To examine the inheritance of this temperature sensitivity, crosses of cvs. Gordo x de Celaya and Flor de Mayo × Rojo 70 were evaluated at two sites differing in mean temperature and using 12.5-h natural photoperiod or 18-h artificially extended photoperiod. Under 18-h photoperiod at the warmer site, Palmira, no plants of the parents or of the F₂ populations flowered, confirming that the parents were sensitive to photoperiod. Under 12.5-h photoperiod at the cooler site, Popayan, the parents for each cross flowered at similar dates and no segregation for days to flower was observed. However, under 18-h photoperiod, de Celaya and Rojo 70 and the F₁ populations did not flower within 100 days after planting, while the F₂ and F₃ populations showed segregation that was consistent with single gene inheritance, late flowering being dominant. Late flowering at Popayan under 18-h photoperiod indicates a lack of temperature sensitivity, so temperature insensitivity of the photoperiod response was dominant to sensitivity. The name Tip, for temperature insensitivity of photoperiod response, is proposed for this gene, with the recessive form of this gene conditioning earlier flowering at cooler temperatures with long daylengths. It is recognized that the observed segregation patterns could represent the effect of multiple alleles at the Ppd or Hr loci, and studies are proposed to test this possibility with molecular markers and recombinant inbred lines.     

Interaccession variation of electrophoregrams of cotyledon protein of field bean (Phaseolus vulgaris L.)

Summary Polyacrylamide gel electrophoresis at acidic pH showed substantive qualitative pattern difference among accessions that had been classified into one cultivar by conventional taxonomic procedures.Join publication of Food Science Department, University of Manitoba (No. 109) and Centro Internacional de Agricultura Tropical-CIAT.     

Inheritance of pod cross-section in beans (Phaseolus vulgaris L.)

Summary OSU 5062, a green bean line with a tendency for pods to become creasebacked (wider than deep) in cross-section, was crossed to near-round-podded cultivars Oregon 83 and Slenderette, oval-podded Bountiful, and flat-podded Roma, to further clarify the inheritance of pod cross-section. Differences among generations in pod cross-section index (PCS), calculated as pod width/depth, were small in the near-round x creaseback crosses (1.07 and 1.01 for Oregon 83 and Slenderette versus 1.20 for OSU 5062). Bountiful (0.63) and Roma (0.50) differed to a greater extent from 5062. Generation means of individual plant PCS of the F₁ and F₂ were almost identical, were almost exactly intermediate between parents, and strongly supported additive inheritance. Backcross data generally supported additive inheritance, but in some cases indicated degrees of dominance of higher PCS. A generation means analysis indicated additive gene action, but deviations from an additive-dominance model were significant in each cross.     

Breeding the common bean (Phaseolus vulgaris L.) for resistance to bean common mosaic virus: alternatives to backcrossing

A series of field experiments was undertaken in order to determine whether resistance to bean common mosaic virus (BCMV) could be incorporated into genotypes of the common bean (Phaseolus vulgaris L.) suitable for cultivation in Zimbabwe without recourse to backcrossing. Six inbred genotypes carrying the resistance-conferring alleles at the loci I and Bc-3 were crossed with five locally-adapted inbred genotypes. The first experiment comprised F₃ progeny rows, each derived from a single unselected F₂ plant, the second, F₃ bulks selected for resistance, and the third, a comparison of selected and unselected F₂-derived F₄ lines. The number of days to flowering and to maturity, the incidence of mosaic and necrosis symptoms, seed yield and seed size were recorded. There was evidence that late flowering and maturity were associated with BCMV resistance in some crosses, though not strongly enough to present an obstacle to plant breeding. The incidence of virus symptoms and seed yield were influenced by genetic factors additional to the major resistance genes, and variation in seed yield was present not only between bulk populations of crosses, but also between single-row plots of lines within crosses. This indicates that early-generation selection for yield in the presence of BCMV, even among progeny selected for BCMV-resistace, is likely to be effective. However, the variation in yield among F₄ lines was least in the highest-yielding crosses, which may represent a limit to successful selection for yield. Seed size was partly under additive genetic control, but there was also evidence of non-allelic interactions. There was no association between large seed size, preferred by consumers, and susceptibility to BCMV in the progeny, indicating that the association between these characters in the parent lines is fortuitous and will not present an obstacle to plant breeding. It is noted that a considerable amount of useful genetic information can be obtained without recourse to elaborate crossing schemes, provided that unselected progeny are included in experiments as controls. The evidence presented indicates that resistance to BCMV can be combined with appropriate values of maturity date, yield and seed size without the need for backcrossing.     

Field bean (Phaseolus vulgaris L.) cultivar identification by electrophoregrams of cotyledon storage proteins

Summary Electrophoretic procedures were developed for seed proteins which can discriminate cultivars of field beans. Proteins were extracted from seven varieties and the extracts were analysed using acid and SDS polyacrylamide gel electrophoresis. Electrophoregrams are presented to illustrate the results that can be obtained with the methods described. Results indicate that sufficient variation is present among the seven cultivars examined to afford unambiguous discrimation and identification of the cultivars. Banding patterns were stable for each genotype.Joint publication of the Department of Plant Science, University of Manitoba (No. 747) and Centro Internacional de Agricultural Tropical-CIAT.     

Phenotypic recurrent selection in common bean (Phaseolus vulgaris L.) based on performance of S2 progenies

Summary The effect of a recurrent selection procedure for improving seed yield per plant was evaluated in common bean. Progress was registered after three cycles of recurrent selection with S2 progeny evaluation performed on the grain yield/plant. Gain from selection was estimated by field testing 45 random S2 lines from each of the C0, C1 and C2 populations. Response to selection for seed yield/plant was 6 g from C0 to C1 and 4.4 g from C1 to C2. The seed yield improvement was due principally to an increase in pods/plant; little contribution was provided by the 1000-seed weight and seeds/pod traits. Broad-sense heritability and genotypic variance for grain yield remained high in all cycles which suggests further gain from additional selection cycles. Grain yield/plant is significantly correlated to pods/plant and seeds/pod traits in all cycles, indicating that plants with favourable combinations of these traits could be identified. The proposed recurrent selection procedure appears to be effective in improving the population and extracting superior genotypes for varietal development.     

The Role of epistasis in controlling seed yield and other agronomic traits in an Andean × Mesoamerican cross of common bean (Phaseolus vulgaris L.)

Epistasis is a pervasive phenomenon in biology. Nevertheless, attempts at identifying epistatic interactions with quantitative trait loci (QTL) analyses have yielded inconsistent results. In this study, we attempt to determine the genetic control of outbreeding depression and the possible role of epistasis following a wide cross in common bean (Phaseolus vulgaris L.). A recombinant inbred population, derived from a cross between Andean and Mesoamerican common bean cultivars, was evaluated in two markedly contrasting environments. A low-density linkage map based on AFLPs was used to locate QTLs for the number of days to maturity, average daily biomass and seed yield accumulation, and harvest index. Both independently acting and digenic epistatic QTLs of similar magnitude were identified. A majority of the loci involved in these epistatic interactions did not have an independent effect. Although we did find evidence for strong epistatic control of the traits investigated, we also found, in contrast to other recent studies, that there was no evidence for a bias toward coadapted gene complexes at the level of digenic epistasis. We discuss these results in relation to the role of epistasis in the evolutionary history of the species and methodological difficulties in detecting epistasis. This revised version was published online in July 2006 with corrections to the Cover Date.     

Biotechnology as a useful tool in common bean (Phaseolus vulgaris L.) improvement

In this review paper requirement to new cultivars applying biotechnological tools in common bean (Phaseolus vulgarisL.) breeding and existing literature and available data are discussed. Application of different methods for in vitro cultivation, transformation, gene mapping and techniques for genome analysis are described. Further works needed in some investigations are also presented. The relation between traditional bean breeding methods and plant biotechnology techniques are addressed. It is concluded that all these techniques will help creating more genetic diversity, which is the main bean-breeding goal, particularly for the most important agricultural traits. The review contains 118 references. This revised version was published online in July 2006 with corrections to the Cover Date.     

Combining ability of common bean (Phaseolus vulgaris) genotypes for root traits across diverse environments

Root system architecture is important for common bean (Phaseolus vulgaris) adaptability to diverse environments. Beans employ complex adaptive root mechanisms for coping with multiple stresses in production environments. Understanding genetic control of root traits is central to improvement of common bean for adaptation to marginal environments. The objectives of this study were to (i) determine combining ability of root and agronomic traits and (ii) estimate the heritability and genetic correlation of root and agronomic traits in common bean. Four bean lines with superior root traits were crossed with four locally adapted varieties in a North Carolina II mating scheme to generate 16 crosses. The 16 F₁s were selfed and advanced to F₂ generation. Eight parents and their F₂ progenies were evaluated in an alpha-Lattice design with two replications. General and specific combing ability mean squares were significant (p ≤ .05) for all traits measured. General predictability ratios ranged from .47 to .68 across locations suggesting that both additive and non-additive gene action modulate root traits and seed yield. Positive and significant (p ≤ .05) phenotypic and genetic correlations revealed significant association between root traits and yield. Moderate to high heritability estimates of between .43 and .67 were realized. Such estimates point to possible deployment of a successful selection programme. Genotype AFR398 displayed significant positive GCA effects among its crosses for both root and agronomic traits hence a potential candidate genotype for inclusion in a bean genetic improvement programme for marginal environments.     

Variation of the storage protein phaseolin in common bean (Phaseolus vulgaris L.) from the Mediterranean area

Summary Variation of phaseolin, the major storage protein in Phaseolus vulgaris L., was analysed in seeds of a germplasm collection from the Mediterranean area. Results showed a number of subvariants differing from the reference patterns for the presence, absence or faintness of single polypeptides. Maximum concentration of variation was found in the Cyprus material. Sources and causes of variation are discussed.     

Comparison of near-isogenic lines for anthracnoseAre are genes in common bean,Phaseolus vulgaris L.

Summary This study was undertaken to determine whether the Are gene controlling anthracnose resistance had an adverse effect on maturity and yield because backcross-derived cultivars/lines had numerically lower yield and later maturity than the respective recurrent parent. Three pairs of common bean lines near-isogenic for theAre gene were developed fromAre are F₂ plants of the sixth backcross of Seafarer, Fleetwood, and Ex Rico 23. The near-isogenic lines were tested along with the recurrent cultivars and backcross-derived cultivars/lines. The results showed no evidence of any adverse effect of theAre gene on the agronomic characteristics in 11 trails at 5 locations in 3 years.