Early evaluation of popcorn inbred lines for phosphorus use efficiency

Phosphorus use efficiency (PUE) evaluation based on shoot dry weight in the early stages of plant development can be a useful measure to identify genotypes that are superior in phosphorus (P) use. The objectives of this study were to (i) identify inbred lines that are efficient and inefficient in P use, (ii) assess the genetic diversity among the inbred lines based on traits related to PUE, (iii) investigate the relationship among traits related to PUE and its components and (iv) estimate the expected responses to selection for increasing PUE. Twenty‐three S₆ popcorn inbred lines were evaluated under high and low P, and several traits related to PUE and its components were measured. Efficient and inefficient inbred lines under each P level were identified, and the genetic diversity assessment grouped these inbred lines in opposite clusters. Phosphorus acquisition efficiency (PAE) was the most important component of PUE in the early stages of plant development, and the direct selection for PAE seems to be the best method for increasing PUE in these stages.     

Genetic diversity of maize inbred lines in relation to downy mildew

A major emphasis in maize breeding in Asian countries has been the improvement for resistance to downy mildew, a serious disease that causes significant yield losses. A total of 102 inbred lines, including lines from Asian breeding programs, Mexico, USA and Germany, were analyzed with 76 SSR markers to measure diversity and investigate the effect of selection for downy mildew resistance. A mean polymorphism information content of 0.59, with a range of 0.14 to 0.83, was observed. Diversity at the gene level showed an average of 5.4 alleles per locus and a range of two to 16 alleles per locus, with a total of 409 alleles. About half of the alleles in the Asian lines had frequencies of 0.10 or less, and only 2% had frequencies > 0.80, indicating the presence of many alleles, and thus a high level of diversity. Some of the high-frequency alleles were in chromosomal regions associated with disease resistance. However, the frequencies of alleles in three SSR loci that are linked to a QTL for resistance to downy mildews in Asia were not significantly different in the subtropical/tropical Asian lines as compared to all the lines in the study. Lines from the US, Germany, and China, comprised three clusters of temperate maize(GS = 0.31), while those from India, Indonesia, Philippines, Thailand, Vietnam and CIMMYT comprised seven indistinct clusters of subtropical and subtropical maize (GS = 0.29). We conclude that maize breeding activity in Asia has not caused a decline in the overall amount of diversity in the region. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic diversity for nitrogen use efficiency in spinach (Spinacia oleracea L.) cultivars using the Ingestad model on hydroponics

Spinach is a leafy vegetable that requires a high N fertilization to have a satisfactory yield and quality, in part because it has poor nitrogen use efficiency (NUE). Therefore, there is a need to breed for cultivars with an excellent NUE. To this end the genetic diversity for NUE-related traits was studied in a diverse set of commercial cultivars. This set was evaluated in a hydroponic system using the Ingestad model; the system was set at a relative growth rate of 0.14 and 0.18 g g^?1 day^?1 (low and high N, respectively). Experiments were performed at low and high plant density. Traits monitored for single plants included fresh and dry weight, leaf area, specific leaf area, dry weight ratio between root and shoot, and chlorophyll content. The high density experiment showed more genotypic variation for the observed traits than the low density one. Biomass production was considerably lower at low than at high N. Path analysis revealed that leaf area had the highest direct effect on NUE, while specific leaf area was an important trait determining variation in NUE at low N. Slow and fast growing genotypes were shown to use different strategies to utilize N, and these strategies are expressed differently at high and low N availability. This indicates that improving spinach for NUE is feasible using the analysed genotypes as source material, and different strategies can be targeted for adaptation of spinach cultivars to low N conditions.     

不同氮效率玉米基因型苗期对光和氮响应的研究

对氮效率表现差异显著的三个玉米自交系幼苗采用不同光强和氮浓度处理,比较根冠比、生物产量、硝酸还原酶和谷氨酰胺合成酶的响应差异。结果表明：不同氮效率自交系对不同氮浓度与光照强度处理的响应存在显著差异;氮低效材料在低光低氮条件下的生物产量表现比氮高效材料好,在高光高氮条件下时生物产量表现比氮高效差;氮高效材料随着氮浓度增加比氮低效材料更能保持根的发达性,表明根系是氮高效的保证。不同氮效率自交系生物产量和硝酸还原酶光氮最佳耦合点值不同,氮低效自交系出现光氮最佳耦合点时所需要的氮浓度（或光强）要比氮高效自交系低。因此,玉米基因型氮效率的发挥不但需要适宜的供氮水平,还需要合适的光照强度。     

Genetic analysis of tropical maize inbred lines for resistance to maize lethal necrosis disease

Maize lethal necrosis (MLN) disease is a recent outbreak in eastern Africa and has emerged as a significant threat to maize production in the region. The disease is caused by the co-infection of Maize chlorotic mottle virus and any member of potyviridae family. A total of 28 maize inbred lines with varying levels of tolerance to MLN were crossed in a half-diallel mating design, and the resulting 340 F₁ crosses and four commercial checks were evaluated under MLN artificial inoculation at Naivasha, Kenya in 2015 and 2016 using an alpha lattice design with two replications. The objectives of the study were to (i) investigate the magnitude of general combining ability variance (σ _GCA ² ) and specific combining ability variance (σ _SCA ² ) and their interaction with years; (ii) evaluate the efficiencies of GCA based prediction and hybrid performance by means of a cross-validation procedure; (iii) estimate trait correlations in the hybrids; and (iv) identify the MLN tolerant single cross hybrids to be used as female parents for three-way cross hybrids. Results of the combined analysis of variance revealed that both GCA and SCA effects were significant (P < 0.05) for all traits except for ear rot. For MLN scores at early and late stages, GCA effects were 2.5–3.5 times higher than SCA effects indicating that additive gene action is more important than non-additive gene action. The GCA based prediction efficiency for MLN resistance and grain yield accounted for 67–90% of the variations in the hybrid performance suggesting that GCA-based prediction can be proposed to predict MLN resistance and grain yield prior to field evaluation. Three parents, CKDHL120918, CML550, and CKLTI0227 with significant GCA effects for GY (0.61–1.21; P < 0.05) were the most resistant to MLN. Hybrids “CKLTI0227 × CML550”, “CKDHL120918 × CKLTI0138”, and “CKDHL120918 × CKLTI0136” ranked among the best performing hybrids with grain yield of 6.0–6.6 t/ha compared with mean yield of commercial check hybrids (0.6 t/ha). The MLN tolerant inbred lines and single cross hybrids identified in this study could be used to improve MLN tolerance in both public and private sector maize breeding programs in eastern Africa.     

Genetic variation for nitrogen use efficiency in winter wheat (Triticum aestivum L.)

Summary The new European Common Agricultural Policy and environmental considerations are certainly to change agricultural practices toward low input cultivation systems. Nitrogen is one of the main inputs of winter wheat in northern France and it contributes highly to phreatic water pollution. A research programme has then been set up in order to study whether it is possible to breed for winter wheat cultivars using more efficiently N fertilisers. Less nitrogen would be applied, decreasing pollution risks and operational costs. It has been shown that a large variation exists for N related traits and for the resistance against N deficiency. On the one hand the cv Arche is very resistant to N deficiency, its yield on low N conditions (with no N fertiliser) is on average 89% of its yield on high N conditions (with a high N application). On the other hand, cv Récital is very susceptible to N deficiency as this same percentage is only 61%. A study on 10 hybrids showed that heterosis for grain yield was higher at low N level than at high N level. This was due to a higher number of grains per m².     

Genetic diversity in tropical maize inbred lines: heterotic group assignment and hybrid performance determined by RFLP markers

Tropical maize inbred lines, eight derived from a Thai synthetic population (BR‐105) and 10 from a Brazilian composite population (BR‐106), were assayed for restriction fragment length polymorphisms with 185 clone‐enzyme combinations. The aim of this study was to investigate genetic distances among tropical maize material and their relationship to heterotic group allocation and hybrid performance. Genetic distances (GDs) were on average greater for BR‐105×BR‐106 lines (0.77) than for BR‐106×BR‐106 (0.71) and for BR‐105×BR‐105 (0.69) lines. Cluster analysis resulted in a clear separation of BR‐105 and BR‐106 populations and was according to pedigree information. Correlations of parental GDs with single crosses and their heterosis for grain yield were high for line crosses from the same heterotic group and low for line combinations from different heterotic groups. Our results suggest that RFLP‐based GDs are efficient and reliable to assess and allocate genotypes from tropical maize populations into heterotic groups. However, RFLP‐based GDs are not suitable for predicting the performance of line crosses from genetically different heterotic groups.     

Genetic diversity of Tainan-white maize inbred lines and prediction of single cross hybrid performance using RAPD markers

To evaluate the genetic diversity of 13 maize inbred lines, and to determine the correlation between genetic distance and single cross hybrid performance, we employed the randomly amplified polymorphic DNA(RAPD)- a PCR-based technique. Six of these lines came from the Taichung population, and others derived from seven different sites. Forty different primers were used to give a total of 646 reproducible amplification products, 547 (84.7%) of them being polymorphic. Genetic divergence was determined using Jaccard's similarity coefficient, and a final dendrogram was constructed by UPGMA (unweighted pair-group method with arithmetical averages) cluster analysis in the CLUSTER procedure of the SAS system. The RAPD analysis was a useful tool in determining the extent of genetic diversity among Tainan-white maize inbred lines in the present case. Cluster analysis showed that the 13 inbred lines could be classified into distinct heterotic groups. There was no significant linear regression of grain dry weight heterosis value and mean performance of hybrids on genetic distance. And their coefficients of determination(R²) are small, so that predictive value is limited. The present results showed that the Jaccard's similarity coefficients based on RAPD data cannot be used to precisely predict the F₁ hybrids yield performance and heterosis value. This revised version was published online in August 2006 with corrections to the Cover Date.     

Genetic diversity of oilseed Brassica napus inbred lines based on sequence-related amplified polymorphism and its relation to hybrid performance

Significant heterosis for seed yield in oilseed rape has created interest in the development of hybrid cultivars. The DNA‐based marker protocol, sequence‐related amplified polymorphism (SRAP) was used to determine genetic diversity among oilseed rape maintainer and restorer lines. This measure was used in an attempt to establish an association between genetic distance and heterosis in hybrids for various agronomic traits. A total of 118 polymorphic loci were generated by 18 SRAP primer combinations. Based on the polymorphism generated by the markers, calculated similarity index values ranged from 0.46 to 0.97. Cluster analysis grouped 10 maintainer and 12 restorer lines into three groups, with the exception of two maintainer lines, PM5 and PM9, which fell outside these groups. The grouping of the lines was largely in agreement with the available pedigree data on their origin and agronomic performance. Analysis of variance among inbred lines and their resulting F₁ hybrids over two locations revealed significant differences for plant height, days to maturity and seed yield, but not for oil content. Substantial mid‐parent heterosis was observed only for seed yield, and ranged from 26% to 169%. All hybrids surpassed their respective inbred lines for this trait, except for a single cross combination of related lines. In general, crosses of lines located in different clusters yielded more than those from the same clusters. Regression analysis revealed a statistically significant relationship between the genetic distance of the parents and seed yield in their hybrid, and their derived mid‐parent and high‐parent heterosis. The correlation coefficient between genetic distance and yield (0.64) indicated a moderately strong relationship, so it is possible that some of the SRAP markers might be linked to quantitative trait loci for seed yield.     

Diallel analysis of maize inbred lines for carotenoids and grain yield

Vitamin A deficiency causes xerophthalmia in preschool-aged children worldwide. The objective of this study was to estimate the genetic parameters that would be useful in selecting parent plants for developing productive hybrids with higher levels of provitamin A in the maize kernel. A complete 7 × 7 diallel mating scheme was used to generate 21 single-cross hybrids. The F₁ crosses and check hybrids were evaluated in complete block design across three different Brazilian environments, and carotenoid content was analyzed by high performance liquid chromatography. General combining ability effects were significant for all traits except α-carotene This result indicates that the contribution of the additive effect was more important for provitamin A and other carotenoids and, consequently that there is high chance of improving this trait through recurrent selection methods. Line 3 produced the highest level of kernel provitamin A among the inbred lines evaluated and also demonstrated the potential to contribute to the development of genetic materials with a good performance for provitamin A. Inbred lines 1, 6, and 7 showed a higher concentration of favorable alleles for grain yield, and inbred lines 3 and 6 exhibited a higher concentration of favorable alleles for β-carotene. Hybrid 1 × 3 performed well in terms of provitamin A and grain yield and combination 2 × 3 was the best performer in terms of lutein content.     

Genetic diversity of tropical maize inbred lines combining resistance to Striga hermonthica with drought tolerance using SNP markers

Striga hermonthica and drought are the major stresses limiting maize yields in sub‐Saharan Africa. The search for diverse maize lines’ tolerance to drought and resistance to S. hermonthica (DTSTHR) is very crucial for yield improvement in areas affected by the two stresses. Understanding the genetic diversity among the lines is important to develop cultivars resistant to S. hermonthica and tolerant to drought. The lines were developed from biparental crosses of drought‐tolerant and Striga‐resistant lines. A total of 128 DTSTHR maize lines were characterized using single‐nucleotide polymorphism (SNP) markers. Results of the cluster analysis based on 3297 SNP markers showed four distinct groups consistent with the pedigrees of the lines. Furthermore, model‐based analysis also formed the same groups of the DTSTHR lines. Integrating the pedigree information with combining ability and the SNP analyses may provide defined heterotic groups for maize improvement work in West and Central Africa. These results also help breeders to utilize DTSTHR lines present at IITA for developing biparental crosses without disrupting the heterotic groups they have established in their breeding programmes.     

Genetic stability of quantitative characters in successive generations in maize inbred lines

Summary Genetic stability was evaluated in 11 long-time inbred lines of maize (Zea mays L.) by measuring 10 plant, ear, and seed characters in successive generations reproduced by self-pollination in ear-to-row progenies. The lines were reproduced through 10 generations, and the studies were made for generations 1, 3, 5, 7, 9, and 11. All lines had been inbred more than 10 generations before the start of the study. For 106 F-tests among generations, significant variation was observed for 40 tests (P<0.05). Major changes were observed in two inbred lines; in most other cases, the statistically significant changes were too small to be of practical importance.Joint contribution: Plant Science Research Division, Agricultural Research Service, U.S. Department of Agriculture, and Journal Paper No J-7245 of the Iowa Agriculture and Home Economics Experiment Station, Ames, Iowa. Project No 1897.     

Genetic variation between Spanish and American versions of sweet corn inbred lines

Conservation of maize inbred lines in different stations causes variability among strains. The objective of this research was to determine agronomic and molecular differences in American sweet corn inbreds maintained in Spain. American and Spanish strains of five sweet corn inbred lines were characterized by using 34 RAPD primers that produced 168 consistent bands. Strains of four of these inbreds were crossed in a diallel design, and hybrids were evaluated in four environments in northwestern Spain. The RAPD characterization showed no differences between strains for two inbreds, while divergence between strains was largest for the inbred 15125. Most primers did not reveal any variability between pairs of strains, while some primers produced variations at high rates. Differences in agronomic performance among Spanish and American strains were most important for P51, followed by P39, while strains 1453 or 15125 were not significantly different. Molecular differences between strains were not related to agronomic performance. Residual heterozygosity or outcrossing cannot explain these results. Lack of adaptation could have caused stress‐induced mutagenesis. Natural selection could have eliminated unfavourable selective mutations, but neutral mutations can be found at the molecular level and favourable mutations could have been selected at the agronomic level.     

Genetic analysis of drought-adaptive traits at seedling stage in early-maturing maize inbred lines and field performance under stress conditions

Maize hybrids that are tolerant to drought at the seedling stage are needed to boost productivity in the rainforest agro-ecology of West Africa. Genetics of tolerance of maize seedling to drought stress is not well understood and is poorly documented. The objectives of this study were to screen early-maturing maize lines for seedling drought tolerance, determine the inheritance and the combining ability of selected inbred lines, and evaluate the performance of seedling drought-tolerant hybrids under field conditions. Forty-nine early maize lines were screened for drought tolerance at the seedling stage. Ten drought-tolerant and two susceptible inbred lines were selected and used in diallel crosses to generate 66 hybrids. The twelve inbred lines and their hybrids were evaluated under induced drought at seedling stage in the screen house and under marginal growing conditions on the field for two seasons. Data collected were subjected to analysis of variance using the DIALLEL-SAS program. Mean squares for both GCA and SCA were significant for most traits in all research environments, indicating that additive and non-additive gene actions are controlling seedling traits under stress conditions. However, for most traits, SCA was preponderant over GCA in all environments, indicating overdominating effect of non-additive gene action. Which in turn implied that the best improvement method for the traits is hybridization. Inbred TZEI 7 had the best GCA effect for seedling traits under screenhouse conditions and for grain yield and other agronomic traits under drought conditions in the field. Hybrids TZEI 357?×?TZEI 411 and TZEI 380?×?TZEI 410 showed superior SCA effects under screen house conditions. In conclusion, the study established wide genetic variability for drought tolerance at seedling stage among tropical early-maturing maize germplasm however, the non-additive gene action was more important for most seedling traits.     

Genetic analysis of feed quality and seed weight of sorghum inbred lines and hybrids using analytical methods and NIRS

Eight lines of grain sorghum and their F1hybrids were evaluated for contents of crude protein (CP), fat (FAT), and starch(STA); protein digestibility (PD); and in vitro dry matter disappearance (IVDMD).The effect of seed weight (SW) on these traits and the potential use of near infrared reflectance spectroscopy (NIRS) to predict them also were investigated. The male lines included three normal-seeded lines (TX2737, TX435, and P954063) and two large-seeded lines (PL-1 and Eastin1). The female lines included common U.S. seed parent lines (Wheatland, Redlan, andSA3042). The lines and their hybrids were grown under dry land conditions at Kansas State University experiment fields in Ashland and Belleville, Kansas, in 1999.The experiments were conducted using a randomized complete block design with four replications at each location. The effect of genotype was significant for all measured traits. The male parent lines were highly variable and expressed high levels of genetic variation in combining ability for CP, PD, STA, and SW. The female parents were genetically more uniform; however, significant general combining ability effects were noted for PD and SW. Significant negative correlations were noted between CP and STA and between SW and STA. Significant positive correlations were found between CP and SW and between FAT and IVDMD. Crude protein content was predicted accurately by NIRS. Fat content and IVDMD could not be predicted by NIRS. The NIRS equations based on ground samples were more accurate than those based on whole-seed samples. This revised version was published online in August 2006 with corrections to the Cover Date.     

Genetic characterization of 218 elite CIMMYT maize inbred lines using RFLP markers

Characterization of genetic diversity among maize inbred lines can facilitate organization of germplasm and improve efficiency of breeding programs. A set of 218 phenotypically diverse inbred maize lines developed at CIMMYT for hybrid production was characterized using 32 RFLP markers to: (1) analyze the genetic diversity present; (2) define potential heterotic groups based on clusters formed with marker data; and (3) identify the most representative testers for each potential heterotic group. Lines were clustered using five different genetic distance measurements to find consensus non-hierarchical clusters. Dendrograms were produced to study hierarchical classification within smaller groups of lines. A very high average allelic diversity was seen in this germplasm. Lines did not cluster based on phenotype, environmental adaptation, grain color or type, maturity, or heterotic response (as determined based on hybrid performance with testers), but lines related by pedigree usually did cluster together. Previously defined testers from opposite heterotic groups were not genetically differentiated, and did not represent well their heterotic group. Discrete clusters were difficult to find; thus, potential heterotic groups will be difficult to suggest using RFLP markers alone. However, suggestions on how to use molecular markers and cross performance information to refine heterotic groups and select representative testers are presented.     

玉米自交系KA105和91227的配合力分析

用陕A群自交系KA105、91227与甘肃省自育NSS群的14个自交系进行配合力测定,结果表明,KA105与各自交系单株产量的一般配合力(GCA)总体比较高,91227与各自交系单株产量的特殊配合力(SCA)总体比较高,单株产量总配合力(TCA)效应值较高的组合依次为KA105×1802、KA105×F5001、KA105×F0601和91227×1802。各性状的特殊配合力(SCA)的相关性分析表明,单株产量与秃尖长呈负相关,与其他性状均呈正相关,其中与穗位高、出籽率呈极显著正相关。在自交系选系中株高、穗长、出籽率、轴粗、雄穗分枝、穗行数、百粒重和穗粗可以早代进行选择,单株产量、穗位高和行粒数可在高代进行选择。     

Genetic control of kernel modification found in South African quality protein maize inbred lines

Summary The genetic control of endosperm modification in 12 opaque-2 maize (Zea mays L.) inbred lines was investigated by means of a diallel cross experiment conducted across two environments. Kernel vitreousness and kernel hardness were determined by partially dominant genes. Additive gene action was largely responsible for kernel modification. A favourable general combining ability for kernel vitreousness and kernel hardness was positively correlated with an accumulation of dominant kernel modifying genes. South African sources of endosperm modifiers have been found to be similar to those used in other quality protein maize breeding programmes. Certain inbred lines displayed sufficient genetic potential for use in a quality protein maize hybrid breeding programme.     

Genetic analysis of inbred lines and their crosses for resistance to head blight (Fusarium culmorum,F. graminearum) in winter rye

Summary For genetic analysis of head blight in winter rye (Secale cereale) caused by Fusarium culmorum, six homozygous inbred lines from the Petkus gene pool were crossed in all combinations to obtain 15 diallel F₁ crosses and the corresponding 15 F₂ crosses. These materials and 10 additional inbreds were artificially inoculated in a 2-year field experiment. The inbreds were also tested with F. graminearum in a separate sub-experiment.Single disease rating, average disease rating, and yield components (grain-weight per spike, 1000-grain weight, kernel number per spike) relative to the non-inoculated treatment were significantly affected by Fusarium head blight in all material groups. The relative grain weight per spike ranged from 26% to 88%. Significant genotypic and genotype x year interaction variances were found throughout. Heritabilities were highest for homogeneous inbreds (h²=0.6–0.8) and lowest for heterogeneous F₂ crosses (h²=0.4–0.6). Disease rating and relative grain-weight per spike were highly correlated for the inbreds and F₂ crosses (r0.7, P0.01), but lower for the F₁ crosses (r0.6, P0.05). Inter-annual correlation coefficients for disease ratings and relative grain-weight per spike ranged from r0.7 (inbreds) to r0.5 (F₂ crosses). The diallel analysis showed significant GCA effects only for relative 1000-grain weight in 1990, but significant SCA and SCAx year interaction variances for most traits. The resistances of 16 inbreds to F. culmorum and F. graminearum were tightly associated for all traits (r=0.96–0.97, P0.01).In conclusion, only slow progress can be expected from selecting for Fusarium head blight resistance in rye due to the limited amount of additive genetic variance and the great improtance of environmental factors.