Inter-subspecific maps of non-brittle rachis genes btr1/btr2 using occidental, oriental and wild barley lines

Brittle rachis of wild barley is controlled by two dominant complementary genes, Btr1 and Btr2, and mutation in either locus (btr1 or btr2) results in the non-brittle rachis of cultivated barley. In this study, a simple monogenic inheritance of non-brittle rachis was demonstrated, and moreover differentiation of multiple dominant alleles for either Btr1 or Btr2 among cultivated and wild barley lines was suggested. Two amplified-fragment-length polymorphism (AFLP) linkage maps of the genes were constructed using wild × btr1-type cultivar and wild × btr2-type cultivar F₂ populations. The order of AFLPs and the btr1/btr2 locus was constant between the wild × cultivar maps and a cultivar × cultivar map previously constructed. No suppression of recombination due to the inter-subspecific crosses was noticed in the interval studied. The btr1 locus and all AFLP loci were separated in the wild × btr1-type cultivar F₂ map, but the btr2 locus and eight AFLP loci did not recombine in the wild × btr2-type cultivar F₂ map, thus slightly different levels of affinity between parental cultivars with the wild line was suggested at the btr1/btr2 locus.     

Rachis brittleness in a hybrid–parent barley (Hordeum vulgare) breeding germplasm with different combinations at the non-brittle rachis genes

Two dominant, closely linked and complementary genes, Btr1 and Btr2, control rachis brittleness in barley. Recessive mutations in any of these genes turn the fragile rachis (brittle) into a tough rachis phenotype (non-brittle). The cross of parents with alternative mutations in the btr genes leads to a brittle F₁ hybrid that presents grain retention problems. We evaluated rachis fragility through a mechanical test and under natural conditions, in F₁ crosses with different compositions at the btr genes. Brittleness was significantly higher in Btr1btr1Btr2btr2 crosses compared to hybrids and inbred parents carrying one of the mutations (btr1btr1Btr2Btr2/Btr1Btr1btr2btr2). This fact could jeopardize the efficient harvest of hybrids bearing alternative mutations, reducing the choice of possible crosses for hybrid barley breeding and hindering the exploitation of potential heterotic patterns. Furthermore, non-brittle hybrids showed higher brittleness than inbreds, suggesting the presence of other dominant factors affecting the trait. In conclusion, this work encourages a deeper study of the genetic control of the rachis brittleness trait and urges the consideration of rachis tenacity as a target for hybrid barley breeding.     

Variations of the vascular bundle system in Asian rice cultivars

Summary The capacity of vascular bundle system transporting assimilates from source to sink is one of the limiting factors for rice (Oryza sativa L.) yield. Genetic variation in vascular bundle system should be investigated for improvement of transporting efficiency. A total of 531 Asian rice cultivars were studied for vascular bundles in the peduncle and its relation to spike morphology. A few difference was detected for the number of primary rachis branches of the spike among the cultivars from various countries. However, the number of vascular bundles significantly differed among the cultivars; those from Nepal, Bangladesh and India bore more vascular bundles than those from Japan. Therefore, the ratio of vascular bundles to rachis branches (V/R ratio) was nearly 1.0 in cultivars from Japan, while those from Nepal, Bangladesh and India ranged from 1.3 to 2.2. Chinese and Indonesian cultivars incuded two types of high and low V/R ratios. Cultivars with high V/R ratio showed positive reactions to the phenol solution, while those with low V/R ratio were negative reactions, suggesting that the former cultivars are of Indica type and the latter of Japonica type. It was concluded that the relationship between vascular bundles and rachis branches differentiated among the ecotypes of Asian cultivated rice.     

RAPD genetic diversity of Albanian olive germplasm and its relationships with other Mediterranean countries

RAPD markers were used for the study of 19Albanian olive cultivars and two wild olives (oleasters). A total of 76polymorphic bands (4.8 polymorphic markers per primer) out of 107 reproducible were obtained using 16 primers. The number of bands per primer ranged from 4 to 10,whereas the number of polymorphic bands ranged from 1 to 9, corresponding to 71%of the total amplification products. All the accessions could be identified by the combination of four primers: OPA-19;OPA-02; OPK-16 and OPP-19. The dendrogram,based on Jaccard's index, included three major groups according to their origin: 1)most of the cultivars from the area of Berat (South of Albania) 2) cultivars from the Centre and Centre-North of Albania and3) cultivars from the Centre and North-West of Albania along with the oleaster from Elbasan. In order to evaluate the origin of Albanian cultivars they were compared to those diffused in other countries like Greece, Italy and Turkey, due to geographical and historical affinity among these countries, by using a one way AMOVA. Although most of the genetic diversity was attributable to differences among cultivars within each country (91.47%) significantφ-values among countries(φ_st = 0.085; p < 0.001)suggested the existence of RAPD phenotypic differentiation. Significant φ-values in all pairs formed by Albania with the other countries were observed. These results are consistent with the autochthonous origin of Albanian cultivars. This revised version was published online in August 2006 with corrections to the Cover Date.     

Selection for resistance to Plasmodiophora brassicae Wor. in oriental subspecies of Brassica rapa L.

Summary Selection for resistance to Plasmodiophora brassicae Wor. in oriental groups of Brassica rapa L.Two hundred and sixty-five cultivars of leafy, oriental bassicas were tested for resistance to 18 collections of Plasmodiophora brassicae, the causal agent of clubroot. The tests were conducted in the greenhouse at low and high level inoculum concentrations. Eleven cultivars of B. rapa pe-tsai, five cultivars of B. rapa pak-choy and three cultivars of B. rapa choy-sum consistently segregated for resistance at the lower concentration of inoculum (1000 spores/ml). All 265 cultivars were susceptible at the higher concentration (1 000 000 spores/ml). Three cultivars were used in pedigree and recurrent selection schemes for increased resistance. After three cycles of selfing resistant individuals, significantly more resistant S₃ lines were derived from each cultivar. Lines derived from two cultivars. Chinese White and PI 257236, continued to improve with each cycle of selection and demonstrated increased resistance to higher levels of inoculum (up to 1 000 000 spores/ml) New cultivars based on intercrosses of S₂ resistant individuals also had significantly better resistance than the original cultivar. After two cycles of selection in the third cultivar, PI 419007, resistance did not increase and its S₂ mass did not differ significantly from the original cultivar. Evidence that indicates resistance is pathotype-non-differential and offers an alternative to major gene, pathotype-differential types of resistance currently being introduced to the leafy oriental brassicas from other Brassica rapa groups.     

Molecular assessment of genetic diversity in winter barley and its use in breeding

Summary During the last decades extensive progress has been achieved in winter barley breeding with respect to both, yield and resistance to fungal and viral diseases. This progress is mainly due to the efficient use of the genetic diversity present within high yielding adapted cultivars and – with respect to resistance – to the extensive evaluation of genetic resources followed by genetic analyses and introgression of respective genes by sexual recombination. Detailed knowledge on genetic diversity present on the molecular level regarding specific traits as well as on the whole genome level may enhance barley breeding today by facilitating efficient selection of parental lines and marker assisted selection procedures. In the present paper the state of the art with respect to virus diseases, i.e. Barley mild mosaic virus, Barley yellow mosaic virus, and Barley yellow dwarf virus is briefly reviewed and first results on a project aiming on a genome wide estimation of genetic diversity which in combination with data on yield and additional agronomic traits may facilitate the detection of marker trait associations and a more efficient selection of parental genotypes are presented. By field tests of 49 two-rowed and 64 six-rowed winter barley cultivars the genetic gain in yield for the period 1970–2003 was estimated at 54.6 kg ha⁻¹ year⁻¹ (r² = 0.567) for the six-rowed cultivars and at 37.5 kg ha⁻¹ year⁻¹ (r² = 0.621) for the two-rowed cultivars. Analysis of 30 SSRs revealed a non-homogenous allele distribution between two and six-rowed cultivars and changes of allele frequencies in relation to the time of release. By PCoA a separation between two and six-rowed cultivars was observed but no clear cut differentiation in relation to the time of release. In the two-rowed cultivars an increase in genetic diversity (DI) from older to newly released cultivars was detected.     

Development and cytogenetic characterisation of a double goat grass-barley chromosome substitution in tritordeum

×Tritordeum (Ascherson et Graebner, an amphiploid between Triticum turgidum conv. durum and Hordeum chilense), and chromosome substitution lines of tritordeum where chromosomes 2 H ^ch or 3 H ^ch H. chilense were replaced with chromosome 2 D of T. aestivum or 3 H ^v chromosome of H. vulgare, respectively, were used to assess the effect of specific chromosomes on the rachis. ×Tritordeum has brittle rachis while the 2 D(2 H ^ch) and 3 H ^v (3 H ^ch) substitution lines have non-brittle rachis. Both lines also have compact spikes, a character highly desirable for the improvement of tritordeum threshability. Different combinations of 2 D and 3 H ^v translocations were developed in tritordeum. In this article we present information on the identification and characterisation of all these introgression lines by the fluorescent in situ hybridisation.     

Two independent gene loci controlling non-brittle pedicels in buckwheat

The shattering habit in buckwheat occurs because of brittle or weak pedicels. Brittle pedicels are observed in wild buckwheat but not in cultivated buckwheat. Using 2 self-compatible lines, 01AMU2 with brittle pedicels and Kyukei SC2 (KSC2) with non-brittle pedicels, produced by an interspecific cross between Fagopyrum esculentum cv Botansoba (non-brittle) andF. homotropicum (brittle), we investigated the inheritance of brittle pedicels. F₁ plants derived from crosses between Botansoba × 01AMU2 and Botansoba × KSC2 had brittle pedicels. The F₂ population derived from the cross between Botansoba × 01AMU2 showed segregation of brittle and non-brittle pedicels that fit the expected 3:1 ratio, suggesting that non-brittle pedicel in Botansoba is controlled by a single recessive gene (sht1). Another F₂ population, derived from the cross between Botansoba × KSC2, showed segregation of brittle and non-brittle pedicels that fit an expected ratio of 9:7,suggesting that non-brittle pedicel in KSC2is controlled by a different single recessive gene (sht2). Thus, brittle pedicel is achieved by 2 complementary genes Sht1 and Sht2. The sht1 locus is linked to the S locus with a recombination frequency of5.46±1.18 (%). We investigated whether common buckwheat has the allele sht2by crossing 6 common buckwheat lines withKSC2. An analysis of the preliminary data showed that some of the F₁ had brittle pedicels and others had non-brittle pedicels, suggesting that some common buckwheat lines possess both the allelesSht2 and sht2. This revised version was published online in July 2006 with corrections to the Cover Date.     

Barley lines showing prominent high green shoot regeneration in cultures derived from immature embryos

Eighty‐four cultivars of barley (Hordeum vulgare) and 95 wild strains (82 of H. spontaneum and 13 of H. agriocrithon) were surveyed for the production of callus, callus growth, and shoot regeneration in cultures derived from immature embryos. All cultivars except for ‘Turkey 381′, induced calli from more than 90% of embryos. On the other hand, the wild lines showed a large variation in the percentage of callus induction from 0 to 100%. Among the cultivars, those with the brittle rachis genotype, bt Bt₂, on chromosome 3H, regenerated shoots with a significantly higher percentage than the cultivars with the Bt bt₂ genotype. Green shoots were produced in a higher ratio (0.84) in the cultivars than in the wild lines (0.52). Among the lines examined,‘Lenins’ regenerated shoots efficiently (90.4%) and produced the highest number of calli with green shoots per embryo (4.77) followed by ‘Golden Promise’ (3.15). Examination of callus growth and shoot regeneration from embryos at different developmental stages revealed that scutellum development affected the quantity and quality of callus and shoot regeneration.     

Diallel analysis of resistance to Septoria tritici isolates in durum wheat

Summary All crosses, except for reciprocals, were made among ten cultivars originating from crop improvement programs in North Africa and the Middle East. The entries varied widely in reaction to Septoria tritici. F₁ and F₂ progenies of the crosses were evaluated using eight S. tritici isolates from seven countries in the Mediterranean area. Thus, sixteen separate combining ability analyses were excecuted. General combining ability (GCA) was the major component of variation, although specific combining ability (SCA) was present in most cases. Additive variance thus appears to be of predominant importance. Nevertheless, non-additive variance may interfere when line selection in a breeding program is practiced. While differing greatly among cultivars, specific GCA effects for each cultivar separately were of similar magnitude for all isolates. Ranking statistics determined that cultivars were ranked in similar order for both means and specific GCA effects independent of the isolate used. Different isolates may therefore interact with similar or identical genetically controlled mechanisms in a particular cultivar. This could indicate the absence of differential gene-for-gene relationships and suggests that isolates vary in aggressiveness rather than in virulence.     

Investigation of possible associations between partial fertility restoration and agronomic traits in Triticum aestivum L.

Summary Many conventional hard red spring wheat (Triticum aestivum L. em Thell) lines, including several North Dakota cultivars, carry a gene (or genes) which restore partial male fertility to male sterile plants with Triticum timopheevi Zhuk. cytoplasm. Since this gene has no fertility restoration function in T. aestivum cytoplasm, the postulation can be made that it is being retained in conventional lines because of pleiotropic effects, favorable linkages or chance. The research reported in this paper examined these possibilities. Forty F₆ lines, derived from a single F₂ plant which was heterozygous for a gene (or genes) for partial fertility restoration, were evaluated for two years in a yield trial planted at Fargo, North Dakota. The 40 lines were testcrossed to a male sterile line having T. timopheevi cytoplasm, and the mean seed set of testcrosses was used as a measure of a line's fertility restoration potential. Twenty-seven lines had the gene for partial fertility, and 13 lines apparently lacked this gene. The 40 lines differed for heading date, anther extrusion, plant height, grain yield, 200-kernel weight, test weight, and grain protein percentage. However, comparisons of lines having the restorer gene with those lacking the gene did not provide any obvious explanation for the retention of the partial fertility restorer gene in the breeding stocks of the North Dakota conventional hard red spring wheat breeding program. The possibility that the restorer gene was linked with genes for resistance to stem rust or leaf rust also was evaluated by testing lines for their reaction to several races of rust. No conclusive association was found.Contribution from the Agric. Exp. Sta., North Dakota State University, Fargo, ND 58105, Journal Article no.     

Partial resistance to a Fusarium root disease in Egyptian white lupin landraces

A Fusarium sp. root pathogen of lupin is the causal agent of the most important disease that affects the cultivation of white lupin (Lupinus albus L.) in Egypt. The aim of our research was to investigate whether host resistance to Fusariumroot disease was available in Egyptian landraces ofLupinus albus. Five Fusarium isolates collected from white lupin samples in Egypt were tested with an Egyptian landrace and a French cultivar. The most aggressive isolate was used to screen an additional 15 Egyptian landraces, two cultivars released in Egypt after selection among landraces, one Polish cultivar, and two French cultivars. The assessment of host response to Fusarium was performed in a field, and under controlled conditions in a greenhouse pot experiment. Most landraces and the two Egyptian cultivars showed better resistance with good accordance between field and pot experiment. This experiment showed that Egyptian genetic resources of white lupin possess partial resistance to Fusarium root rot. Egyptian germplasm may be an alternative genetic source for incorporating partial resistance to Fusarium root rot into the breeding pools. This revised version was published online in July 2006 with corrections to the Cover Date.     

Cytological and Microsatellite Mapping of the Gene for Brittle Rachis in a Triticum Aestivum-Aegilops Tauschii Introgression Line

Summary Aegilops tauschii (Coss.) Schmal. (2n = 2x = 14, DD), a wild relative of wheat has been considered to be a valuable source of variation for improvement of cultivated wheats. However, undesirable genes can be incorporated into the cultivated varieties from wild relatives. The spontaneous spike shattering caused by the brittle rachis character is of adaptive value in wild grass species, but not in cultivated varieties. The rachis of R-61, which was derived from the cross of T. aestivum cv. Bet Hashita with an accession of Ae. tauschii, was brittle. Using telosomic stocks, the brittle rachis gene Br ⁶¹ (tentatively designated) of B-61 was located on the short arm of chromosome 3D and the distance of Br ⁶¹ to the centromere was 31.9 cM. The distance of Br ⁶¹ from the centromeric marker Xgdm72 was 25.3 cM on the short arm of chromosome 3D. The location of Br ⁶¹ was similar to Br ₁ whose location was determined by telosomic mapping and microsatellite mapping. Discrepancy of disarticulation type was found between R-61 and Aegilops tauschii suggesting that the recombination around the regions of Br ₁ locus and Br ^t locus created the wedge type disarticulation of R-61.     

The effect of pedicel length on lateral kernel weight in two-six rowed near isogenic lines of barley (Hordeum vulgare L.)

Summary Fifteen backcross derived, six-rowed isogenic barley (Hordeum vulgare L.) lines with the genotype vvii, nine in a six-rowed background, and six in a two-rowed background, were evaluated over 3 years for pedicel length and lateral and central kernel weight.Within the six-rowed and two-rowed backgrounds there were significant differences between isolines for all three characteristics studied. The lateral kernel weights of the six-rowed isolines were approximately half of their central kernel weights. Isolines with club heads had signicantly longer pedicels and significantly lower lateral and central kernel weight than lax headed types. A significant negative correlation was found between pedicel length and lateral kernel weight for the 15 isolines and within the six-rowed background, indicating that as pedicel length increases, lateral kernel weight tends to decrease.We recommend that breeders making selections of six-rowed segregates from two x six-rowed crosses should select against pedicellate (vvii) laterals.Cooperative investigations of the Mont. Agric. Exp. Stn. and ARS, USDA. Published with the approval of the Director of the Mont. Agric. Exp. Stn. as Journal Series No. 1463.     

Breeding Progress in Grain Yield and Selected Agronomic Characters of Winter Barley (Hordeum vulgare L.) over the Last Quarter of a Century

This study gives estimates of breeding progress achieved in winter barley (Hordeum vulgare L.) since the 1960′s in grain yield and the change in several morphological traits for seventeen historically important cultivars: 12 six-rowed and 5 two-rowed, grouped into four epochs according to the period of major commercialization in Italy. All genotypes were evaluated across a range of soil fertility and climatic environments. The modern six-rowed cultivars have shown a consistent increase in tillers/m² and seeds/spike (16 and 28 %, respectively) over the local populations. In the modern two-rowed cultivar ‘Igri’ the increase in tillers/m² and seed weight were, respectively, 20 and 14 % snd seeds/spike decreased by 20 % over the local populations. The modern six-rowed and two-rowed cultivars have less lodging, are earlier and shorter than the old varieties and local populations. In the last quarter of a century, the breeding progress for gram yield has been increased by 52 and 74 kg/ ha/year or 0.75 and 1.1 % per year respectively, for six-rowed and two-rowed genotypes: while the gain in biomass yield in the same period was not uniform for six-rowed cuitivars and increased by 64 kg/ha/ year or 0.46 % in two-rowed cultivars. The grain yield improvement in the modern six-rowed and two-rowed cultivars is the result of a better partitioning of the photosynthetic products into the grain.     

Assessment of genetic variation of bread wheat varieties using microsatellite markers

The DNA fingerprinting profiles of 11 bread wheat cultivars, grown in Turkey, was obtained by using 19 highly polymorphic wheat microsatellites. Up to six randomly selected individuals from each of these cultivars were subjected to analysis. Estimated polymorphism information content (PIC) values among 65 individual genotypes for 19 loci were between 0.36 and 0.87 with an average value of 0.68. The numbers of observed alleles were between 2 and 9, with an average value of 5.42. These relationships were assessed among cultivars and among their individual genotypes using the mean pairwise average square distance (D ₁) (or the delta mu measure of distance (Ddm)) matrix and neighbor-joining method based on `Nei-72' distance matrix, respectively. Two spring cultivars, `Kaklic-88' and `Orso', were closely related to each other; the other 9 winter and facultative cultivars were dispersed. Pedigrees of cultivars represented very little shared information among each other, therefore, they could not been utilized in comparisons. This revised version was published online in July 2006 with corrections to the Cover Date.     

An S-allele survey of cabbage (Brassica oleracea var. Capitata)

Summary A total of 31 S-alleles was found in a survey of 197 cabbage plants representing 11 cultivars of diverse type. Most of these S-alleles also occurred in either kale or Brussels sprouts, but five of them have not been found previously and apparently occur only in cabbage. A more detailed study of five cultivars of spring cabbage showed only 12 S-alleles in all, with 6–10 S-alleles in four older cultivars and only 3 S-alleles in the newer more highly selected cultivar. S2 was by far the commonest S-allele, as it is in B. oleracea as a whole. The highly recessive alleles S5 and S15 were not particularly common in cabbage and this may partly explain why the sib problem in F₁ hybrids is apparently less in cabbage than in Brussels sprouts. Three cases were found in which an S-allele was completely recessive in both the stigma and the pollen. The problems for the breeder created by this rather unusual situation are discussed.     

Variation and covariation in Vicia faba L. populations of Mediterranean origins

Summary Variation and covariation in 15 Vicia faba L. ssp. major populations from Italy. Greece and Egypt were analyzed. Ten quantitative morphobiological characters of agronomical and nutritional interest were observed. Differences among countries of origin were highly significant for all characters except for lowest podded node. Phenotypic distances among populations, both within and among origins, estimated on canonical variates evidenced that the Egyptian populations from a distinct group and that a relevant degree of similarity exists among the Greek and the Italian meterial. The covariation structure within populations, which was studied by means of factor analysis, was comparatively simpler in the Egyptian material than in that form the other two Mediterranean countries. The differences evidenced can be attributed to different gene associations between characters and suggest the possibility of obtaining, through recombination, genotypes agronomically more favorable.Research work supported by C.N.R., Italy, special grant. Sub-Project 1, Paper No. 299.     

A comparison of marker-assisted and phenotypic selection for high grain protein content in spring wheat

Wheat grain protein content (GPC) is a primary end-use quality determinant for hard spring wheat (Triticum aestivum L.), and marker-assisted selection (MAS) could help plant breeders to develop high GPC cultivars. Two experiments were conducted using two populations developed by crossing low GPC cultivars (Ember) and (McVey) with (Glupro), which contains a high GPC QTL from Triticum dicoccoides (DIC). In one experiment, MAS and phenotypic selection (PS) were employed to select high GPC genotypes, and the selected genotypes were grown in six North Dakota (ND), USA environments. In a second experiment, molecular markers were used to select BC₂F₂ plants from each marker class for the DIC allele from each population. These plants were twice self-pollinated to produce BC₂F₄ plants, which were grown in single ND and Minnesota (MN) environments. Mean GPC was highest among lines using PS at two environments and not significantly different between MAS and PS in the other four environments. Lines presumably homozygous for DIC alleles had significantly higher GPC than their respective low GPC parents. The phenotypic GPC variation explained by the markers (r ²) was 30% at the ND and 15% at the MN environment. The use of PS was as effective as MAS in selecting for high GPC genotypes and more effective in some environments. This likely can be attributed to PS enabling selection for both the major QTL and other genes contributing to GPC. The use of molecular markers might be more advantageous for transferring the high GPC DIC QTL in a backcrossing program during parent development.