A review of farm-scale nutrient budgets for organic farms as a tool for management of soil fertility

Abstract. On organic farms, where the importation of materials to build/maintain soil fertility is restricted, it is important that a balance between inputs and outputs of nutrients is achieved to ensure both short-term productivity and long-term sustainability. This paper considers different approaches to nutrient budgeting on organic farms and evaluates the sources of bias in the measurements and/or estimates of the nutrient inputs and outputs. The paper collates 88 nutrient budgets compiled at the farm scale in nine temperate countries. All the nitrogen (N) budgets showed an N surplus (average 83.2 kg N ha^–1 yr^–1). The efficiency of N use, defined as outputs/inputs, was highest (0.9) and lowest (0.2) in arable and beef systems respectively. The phosphorus (P) and potassium (K) budgets showed both surpluses and deficits (average 3.6 kg P ha^–1 yr^–1, 14.2 kg K ha^–1 yr^–1) with horticultural systems showing large surpluses resulting from purchased manure. The estimation of N fixation and quantities of nutrients in purchased manures may introduce significant errors in nutrient budgets. Overall, the data illustrate the diversity of management systems in place on organic farms, and suggest that used together with soil analysis, nutrient budgets are a useful tool for improving the long-term sustainability of organic systems.     

Evaluation of four genes in rice for their suitability as endogenous reference standards in quantitative PCR

The genetically modified (GM) food/feed quantification depends on the reliable detection systems of endogenous reference genes. Currently, four endogenous reference genes including sucrose phosphate synthase (SPS), GOS9, phospholipase D (PLD), and ppi phosphofructokinase (ppi-PPF) of rice have been used in GM rice detection. To compare the applicability of these four rice reference genes in quantitative PCR systems, we analyzed the target nucleotide sequence variation in 58 conventional rice varieties from various geographic and phylogenic origins, also their quantification performances were evaluated using quantitative real-time PCR and GeNorm analysis via a series of statistical calculation to get a "M value" which is negative correlation with the stability of genes. The sequencing analysis results showed that the reported GOS9 and PLD taqman probe regions had detectable single nucleotide polymorphisms (SNPs) among the tested rice cultivars, while no SNPs were observed for SPS and ppi-PPF amplicons. Also, poor quantitative performance was detectable in these cultivars with SNPs using GOS9 and PLD quantitative PCR systems. Even though the PCR efficiency of ppi-PPF system was slightly lower, the SPS and ppi-PPF quantitative PCR systems were shown to be applicable for rice endogenous reference assay with less variation among the C(t) values, good reproducibility in quantitative assays, and the low M values by the comprehensive quantitative PCR comparison and GeNorm analysis.     

Kinetics of nutrient release from different organic residues using a laboratory system

Organic residues play a vital role in maintaining soil fertility in arid and semi-arid regions. Knowledge of the nutrient release from organic residues will help in optimizing nutrient efficiency in agricultural crop production systems. This study was conducted to assess the continuous release of phosphorus (P), potassium (K), calcium (Ca) and magnesium (Mg) from eight different organic residues (sheep manure, beet, waste material, rape, poultry manure, sunflower, potato and garlic) using successive extractions with distilled water. The residues were shaken for 1 h and equilibrated for longer intervals (1, 3.5, 18, 42, 72, 192, 768, 1248, 1608, 1968 and 2328 h) with successive extractions. Cumulative nutrient release curves by different organic residues versus time showed an initial rapid phase followed by a slow phase. The average percentage of nutrients released and the average release rate of nutrients found using a power model was different and were in the order K > P > Ca > Mg and Ca > Mg > P > K, respectively. According to MINTEQ software, the partitioning of total P between HPO₄ ^2? and H₂PO₄ ^? is sensitive to the type of organic residue. On average (pooled over all extractions), between 13% (rape) to 40% (poultry) and 27% (poultry manure) to 79% (beet) of total P in aqueous solutions present as HPO₄ ^2? and H₂PO₄ ^?, respectively. Among the various organic residues and in the first stage of release, sunflower residue, beet residue, poultry manure and garlic residue had the highest rate constant for Ca, Mg, P and K, respectively, indicating the high potential availability of these nutrients in the early stage of application to soils.     

Quantitation of polychlorinated biphenyl residues by electron capture gas-liquid chromatography: reference material characterization and preliminary study.

Weight per cent compositions of individual peaks of Aroclors 1016, 1242, 1248, 1254, and 1260 were determined under standard gas-liquid chromatographic (GLC) conditions. The GLC peak compositions were determined by using a Hall electrolytic conductivity detector for chlorine measurement and chemical ionization mass spectrometry with single ion monitoring for molecular weight characterization. The Aroclors used are available as reference materials for individual peak quantitation of polychlorinated biphenyl (PCB) residues by electron capture GLC. On the basis of a limited interlaboratory study and a collaborative study, the individual peak method shows improved interlaboratory precision and/or accuracy in PCB quantitation over existing methods.     

Conditioning of sediment polluted with heavy metals using plants as a preliminary stage of the bioremediation process: a large-scale study

Purpose

A bioremediation process for sediments contaminated with heavy metals has been developed based on two core stages: (1) conditioning of dredged sludge using plants; and (2) solid-bed bioleaching of heavy metals from the resulting soil-like material using microbially produced sulfuric acid. In laboratory and pilot-scale tests, reed canary grass (Phalaris arundinacea) was found to be best suited for the conditioning process. To demonstrate the feasibility of conditioning in practice, a study on a larger scale was performed.

Materials and methods

The sediment originated from a detritus basin of the Weisse Elster River in Leipzig (Saxony, Germany) and was polluted with heavy metals, especially with zinc and cadmium. The dredged sludge was a muddy-pasty, anoxic, and had a high organic matter content. The experimental basin (base area of 50?×?23 m) was filled with 1,400 m³ of sludge to a height of 1.2 m. Conditioning was carried out in five segments that were planted with pre-cultivated Phalaris plants at two plant densities, sowed with Phalaris seeds using two different seeding devices, and grown over by vegetation. Plant development and changing sediment characteristics were analyzed during two vegetation periods by harvesting plant biomass every 4 weeks and sampling sediment material at two different depths every 2 weeks over a total duration of 475 days.

Results and discussion

At the end of the second vegetation period, the pre-cultivated Phalaris plants had reached a height of 2 m, compared to 1.8 m for the sowed Phalaris seeds. Regarding root penetration and the degree of sediment conditioning, the less expensive sowing techniques yielded similar results to planting pre-cultivated plants. The content of heavy metals in the Phalaris plants was below the permissible limits for Germany. The vegetation evapotranspirated large amounts of water from the sediment and transported oxygen into the anoxic sludge. The water content was reduced from 68 to 37 %. The muddy-pasty sludge turned into a soil-like oxic material with a high permeability to water. The oxidation of sediment-borne compounds lowered the pH from 7.3 to 6.0. Due to the high total precipitation in Saxony in the summer of 2010, a maximum of 65 % of the sediment was conditioned.

Conclusions

The feasibility of the first core stage of the bioremediation process for sediments was demonstrated in practice by conditioning 1,400 m³ of dredged sludge using reed canary grass. To establish the proposed sediment treatment in practice, the applicability of the central core stage–solid-bed bioleaching of conditioned soil-like sediment–will also be tested at a larger scale.     

Reduction of persistent organic pollutants in fishmeal: a feasibility study

The dioxin, dioxin-like polychlorinated biphenyl (DL-PCB), fat, and dry matter partitioning during fishmeal production have been studied in pilot scale. Most of the dry matter and lipid content in the fishmeal could be ascribed to the press cake intermediate product. Dioxins and DL-PCBs are fat-soluble compounds, and the process partitioning is reflected by the fat partitioning data. Enzyme and heat treatment of the press cake and stickwater concentrate did not improve fat separation. Soybean oil extraction of the press cake reduced the dioxin and DL-PCB content by 97%. Less exchange of fatty acids was observed (56-72%). Combined with fat separation of the stickwater concentrate, the applied process conditions were able to give a fishmeal decontamination rate higher than hexane and isopropanol extraction of the fishmeal. Quantification of fat content based on chloroform/methanol extraction was found to be the best protocol to estimate fat partitioning and decontamination effects. The oil extraction process requires further optimization, but has several advantages compared to organic solvent extraction. These include easy implementation in an existing fishmeal processing line, use of a safe and nonflammable extraction medium, and expected lower investment and operation costs. A new integrated fishmeal and fish oil production and decontamination process line is proposed.     

Decomposition and nutrient mineralisation of leaf litter in smallholder cocoa agroforests: a comparison of organic and conventional farms in Ghana

Purpose

Although litter decomposition and nutrient release patterns have been studied in cocoa agroforestry systems in general, studies focusing on organic and conventional cocoa systems are lacking which is critical as organic farms are particularly dependent on nutrient returns from decomposing litter.

Materials and methods

Dynamics in leaf litter decomposition and the mineralisation of macro- and micro-nutrients in organic and conventional cocoa agroforestry systems were studied using the litterbag technique for 12 months.

Results

The average monthly mass loss was more than two times higher on organic farms (9.2–14.4 g month^?1) compared to conventional farms (4.2–7.3 g month^?1) in the first five months. The annual rate of decomposition (k) was higher on organic farms (1.9) compared to conventional systems (1.4). The time required for 50% (t₅₀) and 99% (t₉₉) decomposition of leaf litter was both lower on organic farms (t₅₀?=?0.4 years, t₉₉?=?2.6 years) than conventional farms (t₅₀?=?0.5 years, t₉₉?=?3.5 years). The estimated k values for macro- and micro-nutrients on organic cocoa systems ranged from 2.3 for calcium to 4.5 for potassium compared to 1.6 (Ca) to 2.8 (K) on conventional farms. The k values of all nutrients (except nitrogen and phosphorus) were significantly greater on organic farms than conventional systems. The estimated k values for both litter decomposition and nutrient mineralisation correlated with soil pH and moisture content, but not initial litter chemistry.

Conclusions

Organic management of smallholder cocoa agroforestry systems enhanced leaf litter decomposition and nutrient mineralisation through improved soil conditions. Thus, organic management of cocoa agroforestry systems may contribute to sustainable cocoa production in smallholder systems through enhanced nutrient return from litter decomposition.

     

Soil metal immobilization and ryegrass uptake of lead, copper and zinc as affected by application of organic materials as soil amendments in a short-term greenhouse trial

Green waste compost, peat, coir and wood bark were applied to metal-contaminated mine waste at the rates of 1%, 10% and 20% on dry weight basis, and perennial ryegrass grown over a period of 6 weeks. Addition of amendments led to increased biomass yield in all soils when compared with the non-amended soil. EDTA extractable Pb, Cu and Zn was significantly reduced in amended soil, while leaf and root metal concentrations were also significantly reduced by the application of amendments, especially at applied rates of 10% and 20%. Coir, green waste compost and wood bark stood out as amendments which were consistent in reducing soil extractable and plant tissue Pb, Cu and Zn; while peat rates above 10% enhanced solubility of Cu and Zn because of a lowering of the soil pH.     

Fractionation of copper and cadmium and their binding with soil organic matter in a contaminated soil amended with organic materials

Purpose  

The contamination of agricultural soils by heavy metals is a worldwide problem. Organic amendments can be used for the immobilization and binding of heavy metal ions in soils by complexation, adsorption, and precipitation. A field trial was carried out to evaluate the influence of some low-cost organic materials such as rice straw (RS), green manure (GM), and pig manure (PM) on the distribution of Cu and Cd and the retention of these metals by organic matter fractions in heavy metal-polluted soils.     

Ion-exchange chromatography as a tool for investigating vanadium speciation in sediments: preliminary studies

Journal of Soils and Sediments - We conducted this investigation in order to develop a simple method for the determination of bioavailable vanadium and its speciation within sediments. The...     

Compost of municipal organic waste: Effects of different management practices on degradability and nutrient release capacity

We studied the degradability and nutrient release capacity of municipal organic waste (MOW) composts obtained with different management practices: shredding and/or mixing with wood shavings, cocomposting with biosolids, and vermicomposting. As indicators of degradability and nutrient release capacity, we measured net N and C mineralization, extractable-P release, N retained in microbial biomass, and dehydrogenase activity in 16-week laboratory incubations, using soil amended at a rate of 40 g kg⁻¹. We also determined the extent to which these indicators were predicted from the chemical characteristics of the amendments. All products increased soil N and P availability, and the size and activity of soil microbial populations. Carbon and N mineralization, and extractable-P release were influenced by amendment chemical characteristics, especially organic matter, total N, total P, C to N ratio, extractable-P and water soluble C. Cocomposting MOW and biosolids is an important alternative for MOW management, because it was the most effective strategy at increasing product degradability and nutrient release capacity (highest net N and C mineralization, extractable-P release, and microbial biomass-N). Shredding MOW increased C mineralization, while the addition of wood shavings decreased net N mineralization, but generally did not affect C mineralization. Thus, these two practices should be used when these specific product characteristics wish to be achieved. Vermicomposting did not prove to be an efficient strategy when MOW was mixed with biosolids.     

Forest moth taxa as indicators of lepidopteran richness and habitat disturbance: a preliminary assessment

The conservation of hyperdiverse taxa such as arthropods may prove frustrating for land managers who lack the taxonomic expertise to perform species-level identifications. Therefore, interest has turned towards selecting indicator taxa that can be monitored as surrogates for detecting changes in entire communities. In this study, we examined whether several moth families or subfamilies were significant indicators of lepidopteran species richness and habitat disturbance in Eastern deciduous forests of North America. We screened moth families to identify assemblages that are easily sampled and primarily comprised of species that can be identified by non-experts. Using existing field data collected over 3 years, we tested four taxa that met our initial requirements with regard to their performance as an indicator of total observed lepidopteran species richness and levels of forest disturbance. We determined that the Arctiidae and Notodontidae hold promise as potential indicator taxa in Eastern deciduous forests. The Arctiidae functioned best as an indicator of moth species richness, while the Notodontidae performed best as a coarse-scale disturbance indicator. Additional research will be required, however, before species within either family have practical significance as tools for assessing forest condition.     

Authentication of organic feed by near-infrared spectroscopy combined with chemometrics: a feasibility study

Organic products tend to retail at a higher price than their conventional counterparts, which makes them susceptible to fraud. In this study we evaluate the application of near-infrared spectroscopy (NIRS) as a rapid, cost-effective method to verify the organic identity of feed for laying hens. For this purpose a total of 36 organic and 60 conventional feed samples from The Netherlands were measured by NIRS. A binary classification model (organic vs conventional feed) was developed using partial least squares discriminant analysis. Models were developed using five different data preprocessing techniques, which were externally validated by a stratified random resampling strategy using 1000 realizations. Spectral regions related to the protein and fat content were among the most important ones for the classification model. The models based on data preprocessed using direct orthogonal signal correction (DOSC), standard normal variate (SNV), and first and second derivatives provided the most successful results in terms of median sensitivity (0.91 in external validation) and median specificity (1.00 for external validation of SNV models and 0.94 for DOSC and first and second derivative models). A previously developed model, which was based on fatty acid fingerprinting of the same set of feed samples, provided a higher sensitivity (1.00). This shows that the NIRS-based approach provides a rapid and low-cost screening tool, whereas the fatty acid fingerprinting model can be used for further confirmation of the organic identity of feed samples for laying hens. These methods provide additional assurance to the administrative controls currently conducted in the organic feed sector.     

Growth of a tomato crop at reduced nutrient concentrations as a strategy to limit eutrophication

In tomato (Lycopersicon esculentum L. cv Trust Fl), effects of various nutrient treatments on growth, fruit yield and quality, nutrient uptake and accumulation were studied in a hydroponic system. Reductions of macronutrient concentrations to 50% (0.5 × C) or 25% (0.25 × C) of the control (C) levels as well as cessation of replenishment of the feed solution for the last 16 days after 7 months growth at control levels, had no adverse effect on growth, fruit yield and fruit quality. However, reduction of macronutrient concentration to 10% of control (0.1 × C) reduced fruit yield by ‐30%. Steady‐state influx and net flux of NO₃ ^‐ into the roots of 4–6 week‐old seedlings had not acclimated and showed concentration dependence from 1.1 mM (0.1 × C) to 11 mM (C). Whereas, Pi and K⁺ fluxes were similar at 0.5 × C and C levels, at 0.1 × C they were significantly lower than the fluxes at higher concentrations, showing lack of acclimation at this concentration. This lack of flux acclimation may account for the adverse effects of low concentration (0.1 × C) on yield. The results have been discussed in the context of eutrophication and it is suggested that in a non‐recirculating hydroponic system, NO₃ ^‐, Pi, and K⁺ levels can be reduced to 25% of the concentrations currently being used in commercial greenhouses (C). In a recirculating system, the crop may be grown at control levels and used to deplete the feed solution for ～3 weeks prior to release of the solution to the drain.     

Comparison of the World Health Organization (WHO) Child Growth Standards and the National Center for Health Statistics/WHO international growth reference: implications for child health programmes

OBJECTIVES: To compare growth patterns and estimates of malnutrition based on the World Health Organization (WHO) Child Growth Standards ('the WHO standards') and the National Center for Health Statistics (NCHS)/WHO international growth reference ('the NCHS reference'), and discuss implications for child health programmes. DESIGN: Secondary analysis of longitudinal data to compare growth patterns (birth to 12 months) and data from two cross-sectional surveys to compare estimates of malnutrition among under-fives. SETTINGS: Bangladesh, Dominican Republic and a pooled sample of infants from North America and Northern Europe. SUBJECTS: Respectively 4787, 10 381 and 226 infants and children. RESULTS: Healthy breast-fed infants tracked along the WHO standard's weight-for-age mean Z-score while appearing to falter on the NCHS reference from 2 months onwards. Underweight rates increased during the first six months and thereafter decreased when based on the WHO standards. For all age groups stunting rates were higher according to the WHO standards. Wasting and severe wasting were substantially higher during the first half of infancy. Thereafter, the prevalence of severe wasting continued to be 1.5 to 2.5 times that of the NCHS reference. The increase in overweight rates based on the WHO standards varied by age group, with an overall relative increase of 34%. CONCLUSIONS: The WHO standards provide a better tool to monitor the rapid and changing rate of growth in early infancy. Their adoption will have important implications for child health with respect to the assessment of lactation performance and the adequacy of infant feeding. Population estimates of malnutrition will vary by age, growth indicator and the nutritional status of index populations.     

Validation of a food-frequency questionnaire for measurement of nutrient intake in a dietary intervention study

OBJECTIVE: To validate a 171-item semi-quantitative food-frequency questionnaire (FFQ) for measurement of nutrient intake in an intervention trial based on walnut supplementation. DESIGN AND SETTING: Free-living adults from Southern California were randomly assigned to either an intervention (walnut-supplemented) or a control diet. The prescribed 6-month intervention was > or = 28 g of walnuts per day for the walnut-supplemented group and > or = 2 g of walnuts per day for the control group. Participants provided at least six 24-hour dietary recalls and completed a self-administered FFQ. SUBJECTS: Eighty-seven adults aged 30-72 years (48 females, 39 males). RESULTS: Our findings from validation (by correlation with six diet recall measures) of the measurement of 32 nutrients by the FFQ are as follows. We found significant positive correlations (corrected for measurement error) between the FFQ and diet recalls for total energy (r = 0.34), total carbohydrate (r = 0.42), vegetable protein (r = 0.43), total fat (r = 0.51), polyunsaturated fat (r = 0.77), total fibre (r = 0.60), linoleic acid (r = 0.78) and alpha-linolenic acid (r = 0.79) - the last nutrient being an excellent nutrient biomarker of the intervention (walnut supplementation). Significant positive correlations were also found for vitamin C (r = 0.96) and certain minerals (r = 0.46-0.80 for calcium, phosphorus, magnesium, iron and potassium). Uncorrected correlations were also high (r>0.40) for retinol, beta-carotene, folate and alcohol. Both diet recalls and FFQ showed a similar significant difference in alpha-linolenic acid content between the walnut-supplemented and control diets. CONCLUSIONS: The FFQ demonstrated good relative validity in the estimation intake of some of the major nutrients in a dietary intervention trial and was a particularly valid estimate of an important nutrient biomarker of walnut supplementation.     

Soil and nutrient losses due to root crops harvesting: a case study from southwestern Iran

Although root crops are widely cultivated in Iran, little is known about soil loss due to crop harvesting (SLCH). We assessed the annual exported soil, soil organic matter (SOM) and nutrients from 47 farms under root crops in southwestern Iran. Soil losses for garlic, potato, sugar beet, radish and beetroot were estimated as 6.27, 2.52, 2.26, 4.10 and 6.95, Mg ha^?1, respectively, which on average was of the order of soil losses by water erosion in the watershed basins of Iran. Total N, P₂O₅ and K₂O losses were estimated as 36.61, 1.10 and 31.50 kg ha^?1 and their costs as 18.24, 0.74 and 19.93 USAlthough root crops are widely cultivated in Iran, little is known about soil loss due to crop harvesting (SLCH). We assessed the annual exported soil, soil organic matter (SOM) and nutrients from 47 farms under root crops in southwestern Iran. Soil losses for garlic, potato, sugar beet, radish and beetroot were estimated as 6.27, 2.52, 2.26, 4.10 and 6.95, Mg ha^?1, respectively, which on average was of the order of soil losses by water erosion in the watershed basins of Iran. Total N, P₂O₅ and K₂O losses were estimated as 36.61, 1.10 and 31.50 kg ha^?1 and their costs as 18.24, 0.74 and 19.93 US$ ha^?1, respectively. For the whole country, total soil, N, P₂O₅, K₂O and SOM losses for garlic, potato and sugar beet were estimated as 731.7 × 10³, 836, 27, 476 and 14.5 × 10³ Mg, respectively (radish and beetroot were excluded due to no reliable data on their planted areas). Correlation analysis showed no significant relationship between soil properties and SLCH (except soil moisture content for radish and clay content for beetroot). The findings indicated that the exported soil, SOM and nutrients were at such levels that SLCH should be considered in soil erosion studies.