Effects of long-term organic and mineral fertilizers on bulk density and penetration resistance in semi-arid Mediterranean soil conditions

Soil aggregation is of great importance in agriculture due to its positive effect on soil physical properties, plant growth and the environment. A long-term (1996-2008) field experiment was performed to investigate the role of mycorrhizal inoculation and organic fertilizers on some of soil properties of Mediterranean soils (Typic Xerofluvent, Menzilat clay-loam soil). We applied a rotation with winter wheat (Triticum aestivum L.) and maize (Zea mays L.) as a second crop during the periods of 1996 and 2008. The study consisted of five experimental treatments; control, mineral fertilizer (300-60-150 kg N-P-K ha⁻¹), manure at 25 t ha⁻¹, compost at 25 t ha⁻¹ and mycorrhiza-inoculated compost at 10 t ha⁻¹ with three replicates. The highest organic matter content both at 0-15 cm and 15-30 cm soil depths were obtained with manure application, whereas mineral fertilizer application had no effect on organic matter accumulation. Manure, compost and mycorrhizal inoculation + compost application had 69%, 32% and 24% higher organic matter contents at 0-30 cm depth as compared to the control application. Organic applications had varying and important effects on aggregation indexes of soils. The greatest mean weight diameters (MWD) at 15-30 cm depth were obtained with manure, mycorrhiza-inoculated compost and compost applications, respectively. The decline in organic matter content of soils in control plots lead disintegration of aggregates demonstrated on significantly lower MWD values. The compost application resulted in occurring the lowest bulk densities at 0-15 and 15-30 cm soil depths, whereas the highest bulk density values were obtained with mineral fertilizer application. Measurements obtained in 2008 indicated that manure and compost applications did not cause any further increase in MWD at manure and compost receiving plots indicated reaching a steady state. However, compost with mycorrhizae application continued to significant increase (P < 0.05) in MWD values of soils. Organic applications significantly lowered the soil bulk density and penetration resistance. The lowest penetration resistance (PR) at 0-50 cm soil depth was obtained with mycorrhizal inoculated compost, and the highest PR was with control and mineral fertilizer applications. The results clearly revealed that mycorrhiza application along with organic fertilizers resulted in decreased bulk density and penetration resistance associated with an increase in organic matter and greater aggregate stability, indicated an improvement in soil structure.     

Molecular detection of nematode predation and scavenging in oribatid mites: Laboratory and field experiments

Recent stable isotope analyses indicate that a number of putative detritivorous soil microarthropods is not typical detritivores but rather live as predators or scavengers. Using molecular gut content analyses the present study investigates if nematodes indeed form part of the diet of oribatid mites. First, in a no-choice laboratory feeding experiment two nematode species (Phasmarhabditis hermaphrodita and Steinernema feltiae) were offered to eight species of oribatid mites and one gamasid mite. Second, after feeding for 4 and 48 h on each nematode species the detection time of prey DNA in the oribatid mite species Steganacarus magnus was investigated. Third, in a field experiment nematode prey (P. hermaphrodita and S. feltiae) in the diet of microarthropods was investigated distinguishing between scavenging and predation. In the no-choice laboratory experiment not only the gamasid mite but also several of the studied oribatid mite species consumed nematodes. After feeding on nematodes for 4 h prey DNA was detectable in S. magnus for only 4 h, but after feeding for 48 h prey DNA was detectable for 128 h, indicating that the duration of feeding on prey is an important determinant for prey DNA detection. The field experiment confirmed that oribatid mite species including Liacarus subterraneus, Platynothrus peltifer and S. magnus intensively prey on nematodes. Interestingly, DNA of dead P. hermaphrodita was detectable to a similar degree as that of living individuals indicating that scavenging is of significant importance in decomposer food webs. Results of our study indicate that predation and scavenging on nematodes by “detritivorous” microarthropods in soil food webs need to be reconsidered.     

Use of 13C and 15N natural abundance techniques to characterize carbon and nitrogen dynamics in composting and in compost-amended soils

Isotope fractionation during composting may produce organic materials with a more homogenous δ¹³C and δ¹⁵N signature allowing study of their fate in soil. To verify this, C, N, δ¹³C and δ¹⁵N content were monitored during nine months covered (thermophilic; >40 °C) composting of corn silage (CSC). The C concentration reduced from 10.34 to 1.73 g C (g ash)⁻¹, or 83.3%, during composting. Nitrogen losses comprised 28.4% of initial N content. Compost δ¹³C values became slightly depleted and increasingly uniform (from −12.8±0.6‰ to −14.1±0.0‰) with composting. Compost δ¹⁵N values (0.3±1.3 to 8.2±0.4‰) increased with a similar reduced isotope variability.The fate of C and N of diverse composts in soil was subsequently examined. C, N, δ¹³C, δ¹⁵N content of whole soil (0-5 cm), light (<1.7 g cm⁻³) and heavy (>1.7 g cm⁻³) fraction, and (250-2000 μm; 53-250 μm and <53 μm) size separates, were characterized. Measurements took place one and two years following surface application of CSC, dairy manure compost (DMC), sewage sludge compost (SSLC), and liquid dairy manure (DM) to a temperate (C₃) grassland soil. The δ¹³C values and total C applied (Mg C ha⁻¹) were DM (−27.3‰; 2.9); DMC (−26.6‰; 10.0); SSLC (−25.9‰; 10.9) and CSC (−14.0‰; 4.6 and 9.2). The δ¹³C of un-amended soil exhibited low spatial (−28.0‰±0.2; n=96) and temporal (±0.1‰) variability. All C₄ (CSC) and C₃ (DMC; SSLC) composts, except C₃ manure (DM), significantly modified bulk soil δ¹³C and δ¹⁵N. Estimates of retention of compost C in soil by carbon balance were less sensitive than those calculated by C isotope techniques. One and two years after application, 95 and 89% (CSC), 75 and 63% (SSLC) and 88 and 42% (DMC) of applied compost C remained in the soil, with the majority (80-90%) found in particulate (>53 μm) and light fractions. However, C₄ compost (CSC) was readily detectable (12% of compost C remaining) in mineral (<53 μm) fractions. The δ¹⁵N-enriched N of compost supported interpretation of δ¹³C data. We can conclude that composts are highly recalcitrant with prolonged C storage in non-mineral soil fractions. The sensitivity of the natural abundance tracer technique to characterize their fate in soil improves during composting, as a more homogeneous C isotope signature develops, in addition to the relatively large amounts of stable C applied in composts.     

Hydrolase activities, microbial biomass and bacterial community in a soil after long-term amendment with different composts

The use of composts in agricultural soils is a widespread practice and the positive effects on soil and plants are known from numerous studies. However, there have been few attempts to compare the effects of different kinds of composts in one single study. The aim of this paper is to investigate to what extent and to which soil depth four major types of composts would affect the soil and its microbiota.In a crop-rotation field experiment, composts produced from (i) urban organic wastes, (ii) green wastes, (iii) manure and (iv) sewage sludge were applied at a rate equivalent to 175 kg N ha⁻¹ yr⁻¹ for 12 years. General (total organic C (C_org), total N (N_t), microbial biomass C (C_mic), and basal respiration), specific (enzyme activities related to C, N and P cycles), biochemical properties and bacterial genetic diversity (based on DGGE analysis of 16S rDNA) were analyzed at different depths (0-10, 10-20 and 20-30 cm).Compost treatment increased C_org at all depths from 11 g kg⁻¹ for control soil to 16.7 g kg⁻¹ for the case of sewage sludge compost. Total N increased with compost treatment at 0-10 cm and 10-20 cm depths, but not at 20-30 cm. Basal respiration and C_mic declined with depth, and the composts resulted in an increase of C_mic and basal respiration. Enzyme activities were different depend on the enzyme and among compost treatments, but in general, the enzyme activities were higher in the upper layers (0-10 and 10-20 cm) than in the 20-30 cm layer. Diversity of ammonia oxidizers and bacteria was lower in the control than in the compost soils. The type of compost had less influence on the composition of the microbial communities than did soil depth.Some of the properties were sensitive enough to distinguish between different compost, while others were not. This stresses the need of multi-parameter approaches when investigating treatment effects on the soil microbial community. In general, with respect to measures of activity, biomass and community diversity, differences down the soil profile were more pronounced than those due to the compost treatments.     

Changes in respiration rate and some physicochemical properties of soil during gut transit through Allolobophora molleri (Lumbricidae,Oligochaeta)

Summary Some physicochemical and biological measurements were carried out on the gut content and casts of Allolobophora molleri, an earthworm which lives in humid soils of Northern Spain. In the anterior part of the gut, water (22% of moist weight of soil) and soluble organic matter (27.4%) had been added to the ingested soil and pH had increased from 5.75 to 7.0. The amount of water-soluble compounds decreased sharply in the middle and posterior parts of the gut and were hardly detectable in control soil or casts. The average O₂ consumption, measured at 28° and 21°C, indicated respectively 2.75-to 12-fold increases in microbial respiration in the gut content compared to the non-ingested soil. These results extend the hypothesis of a mutualistic digestion in earthworms previously proposed for tropical endogeic species.     

Evaluation of bioremediation and detoxification potentiality of Aspergillus niger for removal of hexavalent chromium in soil microcosm

Aspergillus niger isolated from soil of leather tanning effluent had higher activity to remove chromium then the other fungal isolates. The potency of A. niger was evaluated in shake flask culture by absorption of chromium at pH 6, temperature 30 °C. The toxicity of chromium evaluated in petriplates and soil microcosm seed bioassay test had indicated increase in toxicity with the higher concentration of chromate. A. niger introduced in soil microcosm (40% moisture content) with different concentration of chromate (250, 500, 1000, 1500 and 2000 ppm) removed more than 70% chromium in soil contaminated by 250 and 500 ppm of chromate. However, chromium-contaminated soil (2000 ppm of potassium chromate) mixed with compost (5% and 10%) significantly removed chromium in presence of fungus, A. niger. The results of chromate toxicity in the wheat plants revealed that the peroxidases was induced due to increase of metal stress which was reversed in soil microcosm amended with compost.     

CO2 emission in an intensively cultivated loam as affected by long-term application of organic manure and nitrogen fertilizer

A long-term field experiment was conducted to examine the influence of mineral fertilizer and organic manure on the equilibrium dynamics of soil organic C in an intensively cultivated fluvo-aquic soil in the Fengqiu State Key Agro-Ecological Experimental Station (Fengqiu county, Henan province, China) since September 1989. Soil CO₂ flux was measured during the maize and wheat growing seasons in 2002-2003 and 2004 to evaluate the response of soil respiration to additions and/or alterations in mineral fertilizer, organic manure and various environmental factors. The study included seven treatments: organic manure (OM), half-organic manure plus half-fertilizer N (NOM), fertilizer NPK (NPK), fertilizer NP (NP), fertilizer NK (NK), fertilizer PK (PK) and control (CK). Organic C in soil and the soil heavy fraction (organo-mineral complex) was increased from 4.47 to 8.61 mg C g⁻¹ and from 3.32 to 5.68 mg C g⁻¹, respectively, after the 13 yr application of organic manure. In contrast, organic C and the soil heavy fraction increased in NPK soil to only 5.41 and 4.38 mg C g⁻¹, respectively. In the CK treatment, these parameters actually decreased from the initial C concentrations (4.47 and 3.32 mg C g⁻¹) to 3.77 and 3.11 mg C g⁻¹, respectively. Therefore, organic manure efficiently elevated soil organic C. However, only 66% of the increased soil organic C was combined with clay minerals in the OM treatment. Cumulative soil CO₂ emissions from inter-row soil in the OM and NPK treatments were 228 and 188 g C m⁻² during the 2002 maize growing season, 132 and 123 g C m⁻² during the 2002/2003 wheat growing season, and 401 and 346 g C m⁻² yr⁻¹ in 2002-2003, respectively. However, during the 2004 maize growing season, cumulative soil CO₂ emissions were as high as 617 and 556 g C m⁻², respectively, due to the contribution of rhizosphere respiration. The addition of organic manure contributed to a 16% increase in soil CO₂ emission in 2002-2003 (compared to NPK), where only 27%, 36% and 24% of applied organic C was released as CO₂ during the 2002 and 2004 maize growing seasons and in 2002-2003, respectively. During the 2002/2003 wheat growing season, soil CO₂ flux was significantly affected by soil temperature below 20 °C, but by soil moisture (WFPS) during the 2004 maize growing season at soil temperatures above 18 °C. Optimum soil WFPS for soil CO₂ flux was approximately 70%. When WFPS was below 50%, it no longer had a significant impact on soil CO₂ flux during the 2002 maize growing season. This study indicates the application of organic manure composted with wheat straw may be a preferred strategy for increasing soil organic C and sequestering C in soil.     

Biodegradation of estrone and 17 β-estradiol in grassland soils amended with animal wastes

The release of endocrine disrupting chemicals into the environment is of increasing concern due to the formation of an intersex state in freshwater organisms and potential risks to human health. The aim of this study was to investigate the persistence of the naturally occurring hormones, estrone and 17 β-estradiol in three agricultural grassland soils in the presence and absence of cattle and sheep wastes (urine and manure). Biodegradation was investigated using ¹⁴C-labelled hormones which were applied to soil in three different solvents (water, artificial urine and natural sheep urine). When applied directly to soil the two hormones degraded at a similar rate, however, the speed of mineralization was soil type and solvent dependant. The half-life (t_1/2) of the hormones in soils ranged from 5 to 25 d. The hormones were also applied to the soils in sheep and cattle manure of different ages (7 d to 2 yr). Generally, the rate of degradation in the animal manure amended soils was more rapid than in the unamended soils (t_1/2=1-9 d), with mineralization being largely independent of manure age and type. We conclude that in comparison to many xenobiotics, estrogens are not persistent in agricultural soils. However, our calculations suggest that if they are lost to freshwater via runoff or leaching then they may have an appreciable effect on freshwater organisms. Assuming normal landspreading rates our results suggest that the risk of estrogen contamination of freshwater associated with manure spreading is very low.     

Increase in soil pH due to Ca-rich organic matter application causes suppression of the clubroot disease of crucifers

Clubroot disease of cruciferous plants caused by the soil-borne pathogen Plasmodiophora brassicae is difficult to control because the pathogen survives for a long time in soil as resting spores. Disease-suppressive and conducive soils were found during the long-term experiment on the impact of organic matter application to arable fields and have been studied to clarify the biotic and abiotic factors involved in the disease suppression. The fact that a large amount of organic matter, 400 t ha⁻¹ yr⁻¹ farmyard manure (FYM) or 100 t ha⁻¹ yr⁻¹ food factory sludge compost (FSC), had been incorporated for more than 15 yr in the suppressive soils and these soils showed higher pH and Ca concentration than the disease conducive soil led us to hypothesize that an increase in soil pH due to the long-term incorporation of Ca-rich organic matter might be the primary cause of the disease suppression. We have designed a highly reproducible bioassay system to examine this hypothesis. The suppressive and conducive soils were mixed with the resting spores of P. brassicae at a rate of 10⁶ spore g⁻¹ soil, and Brassica campestris was grown in a growth chamber for 8 d. The number of root hair infections was assessed on a microscope. It was found that the incorporation of FYM and FSC at 2.5% (w/w) to the conducive soil suppressed the infection and that the finer particles (?5 mm) of FSC inhibited the infection and increased soil pH more effectively. Neutralization of the conducive soil by Ca(OH)₂, CaCO₃ and KOH suppressed the infection, but the effectiveness of KOH was less than those of Ca(OH)₂ and CaCO₃. Acidification of the suppressive soils by H₂SO₄, promoted the infection. The involvement of soil biota in the disease suppression was investigated using the sterilized (γ-ray irradiation) suppressive soils with respect to soil pH. The γ-ray irradiation promoted the infection at pH 5.5, but no infection was observed at pH 7.4 irrespective of the sterilization status. All these observations suggest that soil pH is a major factor in disease suppression by organic matter application and that Ca and soil biota play certain roles in the suppression under the influence of soil pH.     

Kinetics of bacterial death by heated dolomite powder slurry

The kinetics of the bactericidal action of dolomite powders heated at 600-1000 °C against Escherichia coli and Staphylococcus aureus were investigated. Dolomite powder heated to at least 700 °C exhibited bactericidal action, and the process of bacterial death in the heated dolomite powder slurries followed first-order reaction kinetics. The value of the death rate constant (k) increased with dolomite powder concentration, and the dilution coefficient (n), which indicates the dependence of k on the reagent concentration, was measured. The n values of the powder heated at 700 °C and at temperatures >900 °C were almost identical to those of MgO and CaO, respectively. This suggests that the first emergence of bactericidal action at 700 °C corresponds to generation of MgO while that at temperatures >900 °C is due to generation of CaO. The slurry temperature significantly affects the bactericidal action. The slope of the Arrhenius plot of k for E. coli and S. aureus grown at 37 °C exhibited a discontinuous point at approximately 22 °C, where a change in the value of activation energy for bacterial death occurred. This temperature corresponds to that of the phase transition of cell membrane lipids.     

Maturity indices for composted dairy and pig manures

Bulking agents and bedding materials used on farms for composting manures affect the time required for composts to mature. The effects of these materials on guidelines for the use of composted manures in potting mixes are not fully known. Several chemical and biological compost characteristics were mentioned and a cucumber plant growth greenhouse bioassay was performed on samples removed from windrows during composting of: (i) dairy manure amended with wheat straw; (ii) dairy manure amended with sawdust (mostly Quercus spp.); and (iii) pig manure amended with sawdust and shredded wood (mostly Quercus spp.). Dry weights of cucumber seedlings grown in fertilized and unfertilized potting mixes amended with composts (30%, v/v) having stability values of <1 mg CO₂-C g^-1 dw d⁻¹, did not differ significantly from those in a control peat mix. Only the most mature dairy manure-wheat straw compost samples consistently established sufficient N concentrations in cucumber shoots in unfertilized treatments. For the dairy manure-wheat straw compost, all possible subset regression analyses of compost characteristics versus cucumber plant dry weight revealed that any of several compost characteristics (electrical conductivity-EC, compost age, total N, organic C, C-to-N ratio, ash content, CO₂ respirometry, Solvita CO₂ index and the Solvita^® Compost Maturity Index) predicted growth of cucumber in the unfertilized treatments, and thus maturity. In contrast, at least two characteristics of the dairy manure-sawdust compost were required to predict growth of cucumber in the unfertilized treatments. Effective combinations were EC with compost age and the Solvita^® maturity index with total N. Even five compost characteristics did not satisfactorily predict growth of cucumber in the non-fertilized pig manure-wood compost. Nutrient analysis of cucumber shoots indicated N availability was the principal factor limiting growth in potting mixes amended with the dairy manure-sawdust compost, and even more so in the pig manure-wood compost even though the compost had been stabilized to a high degree (<1 mg CO₂-C g⁻¹ dw d⁻¹). Maturity of the composted manures, which implies a positive initial plant growth response of plants grown without fertilization, could not be predicted by compost characteristics alone unless the bulking agent or bedding type used for the production of the composts was also considered.     

Development of an alternative artificial soil for earthworm toxicity testing in tropical countries

The standard soil invertebrate toxicity tests developed by OECD and ISO use an artificial soil as the test substrate, which contains sphagnum peat as a component. This type of peat is not widely available. Investigation of possible alternative substrates using locally available materials therefore is vital for performing such ecotoxicity tests, particularly in the tropics. We studied the suitability of paddy husk (PH), saw-dust (SD), non-composted (NCCP) and composted coco peat (CCP) as a replacement for sphagnum peat. Artificial soil (AS) was prepared by mixing 70% sand and 20% kaolin clay with 10% PH, SD, NCCP or CCP. First, the reproduction potential of the earthworm Eisenia andrei was investigated in modified artificial soil (MAS) using the original OECD AS as the control. The number of juveniles produced in OECD AS, MAS_PH and MAS_CCP was not significantly different but it was significantly reduced (p < 0.05) in MAS_SD and MAS_NCCP. The toxicity of chlorpyrifos, carbendazim and carbofuran for E. andrei was determined to validate the substrates. The 28-day LC₅₀s for the three pesticides in original AS, MAS_CCP and MAS_PH were not significantly different, but the EC₅₀ for effects on reproduction in the MAS_PH was significantly lower (p < 0.05) compared to OECD AS and MAS_CCP. We conclude that composted coco peat might be a suitable replacement for sphagnum peat in AS for soil ecotoxicity studies.     

Effects of municipal solid waste compost amendments on soil enzyme activities and bacterial genetic diversity

Municipal solid waste (MSW) composts have been used to maintain the long-term productivity of agroecosystems and to protect the soil environment from overcropping, changes in climatic conditions and inadequate management; they also have the additional benefit of reducing waste disposal costs. Since MSW may contain heavy metals and other toxic compounds, amendments cannot only influence soil fertility, but may also affect the composition and activity of soil microorganisms. The effects of MSW compost and mineral N amendments in a 6-year field trial on some physical-chemical properties, enzyme activities and bacterial genetic diversity of cropped plots (Beta vulgaris-Triticum turgidum rotation) and uncropped plots were investigated. The compost was added at the recommended and twice the recommended dosage (12, 24 t ha⁻¹). Amendments of cropped plots with MSW compost increased the contents of organic C from 13.3 to 15.0 g kg⁻¹ soil and total N from 1.55 to 1.65 g kg⁻¹ soil. There were significant increases in dehydrogenase (9.6%), β-glucosidase (13.5%), urease (15.4%), nitrate reductase (21.4%) and phosphatase (9.7%) activities. A significant reduction in protease activity (from 3.6 to 2.8 U g⁻¹ soil) was measured when a double dose of compost was added to the cropped plots. No dosage effect was detected for the other enzymes. Changes in the microbial community, as a consequence of MSW amendment, were minimal as determined using denaturing gradient gel electrophoresis, rDNA internal spacer analysis and amplified ribosomal DNA restriction analysis of bacteria, archaea, actinomycetes, and ammonia oxidizers. This indicates that there was no significant variation in the overall bacterial communities nor in selected taxonomic groups deemed to be essential for soil fertility.     

Thermal stability of soil organic matter pools and their δC values after C3-C4 vegetation change

Carbon isotopic composition of soils subjected to C₃-C₄ vegetation change is a suitable tool for the estimation of C turnover in soil organic matter (SOM) pools. We hypothesized that the biological availability of SOM pools is inversely proportional to their thermal stability. Soil samples from a field plot with 10.5 years of cultivation of the C₄ plant Miscanthus×gigantheus and from a reference plot under C₃ grassland vegetation were analysed by thermogravimetry coupled with differential scanning calorimetry (TG-DSC). According to differential weight losses (dTG) and energy release or consumption (DSC), five SOM pools with increasing thermal stability were distinguished: (I) 20-190 °C, (II) 190-310 °C, (III) 310-390 °C, (IV) 390-480 °C, and (V) 480-1000 °C. Their δ¹³C values were analysed by EA-IRMS. The weight losses in pool I were connected with water evaporation, since no significant C losses were measured and δ¹³C values remained unchanged. The δ¹³C of pools II and III in soil samples under Miscanthus were closer to the δ¹³C of the Miscanthus plant tissues (−11.8‰) compared to the thermally stable SOM pool V (−19.5‰). The portion of the Miscanthus-derived C₄-C in total SOM in 0-5 cm reached 55.4% in the 10.5 years. The C₄-C contribution in pool II was 60% and decreased down to 6% in pool V. The mean residence times (MRT) of SOM pools II, III, and IV were similar (11.6, 12.2, and 15.4 years, respectively), while pool V had a MRT of 163 years. Therefore, we concluded that the biological availability of thermal labile SOM pools (<480 °C) was higher, than that of the thermal stable pool decomposed above 480 °C. However, the increase of SOM stability with rising temperature was not gradual. Therefore, the applicability of the TG-DSC for the separation of SOM pools with different biological availability is limited.     

Diet-related composition of the gut microbiota of Lumbricus rubellus as revealed by a molecular fingerprinting technique and cloning

Interactions between earthworms and microorganisms are essential for the functioning of soil ecosystems as they affect organic matter degradation and nutrient cycling. This is also true for the alpine region, where socio-economic changes lead to the increasing abandonment of pastures, which in turn, causes a considerable shift in the diet of saprotrophic invertebrates and thus impacts food web and decomposition processes. To enhance our understanding of how this diet shift influences earthworms and associated microorganisms, we studied the gut content and cast microbiota of Lumbricus rubellus (Lumbricidae, Oligochaeta), a key macrodecomposer on alpine pastureland in the Central Alps. A feeding experiment with L. rubellus and three different food sources that represent the vegetation shift from an alpine pasture to an abandoned site was set up. Earthworms were collected in the field, transferred to a climate chamber and fed with cow manure, dwarf shrub or grass litter for six weeks. PCR-DGGE (Polymerase chain reaction-denaturing gradient gel electrophoresis) analysis of the DNA extracted from the substrates, the earthworms' gut contents and casts revealed that the gut and cast microbiota was strongly influenced by the food source ingested. Cloning of bacterial 16S rRNA gene fragments demonstrated that the intestinal content was dominated by Proteobacteria, especially from the Gamma-subclass, followed by members of the phyla Bacteroidetes, Actinobacteria and Firmicutes. In contrast, Actinobacteria were detected abundantly in all samples types when a cultivation approach was used. In conclusion, the gut microbiota of L. rubellus was shown to be substantially affected by the food source ingested, suggesting that this essential macrodecomposer is exposed to the diet shift resulting from a land-use change in the alpine area.     

Influence of earthworm activity on aggregate-associated carbon and nitrogen dynamics differs with agroecosystem management

Earthworms are known to be important regulators of soil structure and soil organic matter (SOM) dynamics, however, quantifying their influence on carbon (C) and nitrogen (N) stabilization in agroecosystems remains a pertinent task. We manipulated population densities of the earthworm Aporrectodea rosea in three maize-tomato cropping systems [conventional (i.e., mineral fertilizer), organic (i.e., composted manure and legume cover crop), and an intermediate low-input system (i.e., alternating years of legume cover crop and mineral fertilizer)] to examine their influence on C and N incorporation into soil aggregates. Two treatments, no-earthworm versus the addition of five A. rosea adults, were established in paired microcosms using electro-shocking. A ¹³C and ¹⁵N labeled cover crop was incorporated into the soil of the organic and low-input systems, while ¹⁵N mineral fertilizer was applied in the conventional system. Soil samples were collected during the growing season and wet-sieved to obtain three aggregate size classes: macroaggregates (>250 μm), microaggregates (53-250 μm) and silt and clay fraction (<53 μm). Macroaggregates were further separated into coarse particulate organic matter (cPOM), microaggregates and the silt and clay fraction. Total C, ¹³C, total N and ¹⁵N were measured for all fractions and the bulk soil. Significant earthworm influences were restricted to the low-input and conventional systems on the final sampling date. In the low-input system, earthworms increased the incorporation of new C into microaggregates within macroaggregates by 35% (2.8 g m⁻² increase; P=0.03), compared to the no-earthworm treatment. Within this same cropping system, earthworms increased new N in the cPOM and the silt and clay fractions within macroaggregates, by 49% (0.21 g m⁻²; P<0.01) and 38% (0.19 g m⁻²; P=0.02), respectively. In the conventional system, earthworms appeared to decrease the incorporation of new N into free microaggregates and macroaggregates by 49% (1.38 g m⁻²; P=0.04) and 41% (0.51 g m⁻²; P=0.057), respectively. These results indicate that earthworms can play an important role in C and N dynamics and that agroecosystem management greatly influences the magnitude and direction of their effect.     

Trophic transfer of fatty acids from gut microbiota to the earthworm Lumbricus terrestris L

The diet of earthworms includes soil organic matter, soil microbes and other microfauna, but the relative contribution of these dietary components to earthworm nutrition is not well known. Analysis of fatty acid (FA) profiles can reveal trophic relationships in soil food webs, leading to a better understanding of the energy and nutrient flows from microbiota to earthworms. The objective of this study was to determine the origin of FAs assimilated by the earthworm Lumbricus terrestris L. We analysed the pattern of FAs in: (i) the bulk soil, (ii) soil in the earthworm gut, (iii) the absorptive tissue of the earthworm gut wall, and (iv) the muscular layers of the earthworm body wall. Multivariate analyses performed on the FA profiles suggest that the microbial community in the earthworm gut differs from that in bulk soil. Diverse bacterial and fungal derived FAs, which earthworms cannot synthesize, were found in the earthworm gut wall and body wall, and in the neutral lipids (storage lipids) of the gut wall. The major compounds isolated were 20:4ω6, 20:5ω3 and 18:2ω6, followed by the monoenoic 18:1ω7 and 18:1ω9c, and the saturated 18:0. The microbial FA assemblage in the gut wall resembled the gut soil more than the bulk soil, and the body wall of L. terrestris showed the same microbial derived FA pattern as the gut wall, although at reduced concentrations. We propose the existence of a specific microbial community in the earthworm gut that provides FAs to the earthworm. It appears that L. terrestris may derive more of its energy and nutrients from gut specific microbiota than from microbiota already present in the ingested soil, based on the trophic relationships revealed through FA analysis.     

Organic manure stimulates biological activity and barley growth in soil subject to secondary salinization

A pot experiment was performed to compare the impact of organic manure on soil enzymatic activity, respiration rate and the growth of two barley cultivars (Hordeum vulgare L.) differing in their salt tolerance under a simulated salinized environment. A plastic pot with a hole (2 cm in diameter) in the center of bottom was filled with an anthropogenic (paddy) soil and placed in a porcelain container containing NaCl solution (3.0 g L⁻¹) such that a secondary salinization process was simulated via upward capillary water movement along the soil profile. A treatment with neither organic manure nor simulated soil salinization was taken as a control (CK1). The organic manure was applied either inside or outside rhizobag made of nylon cloth (40 μm of pore size). The soil was treated with: 20 g kg⁻¹ rice straw (RS), 20 g kg⁻¹ pig manure (PM), or 10 g kg⁻¹ rice straw plus 10 g kg⁻¹ pig manure (RS+PM). No organic manure was added in an additional control treatment (CK2). The results indicated that the placement of organic manure both inside and outside rihzobags significantly increased the activity of urease, alkaline phosphatase and dehydrogenase, as well as respiration rate in both rhizosphere and bulk soils. Also, nutrient uptake by barley plants was enhanced in the treatments with organic manure amended either inside or outside rhizobags. The activity of these enzymes along with the respiration rate was higher in rhizosphere than in non-rhizosphere when organic manure was supplied inside rhizobags, while the opposite was found in the case of manure incorporated outside rhizobags. Among all the treatments, RS+PM treatment had most significant stimulating effects on enzymatic and microbial activity and shoot dry weight of barley, followed by PM and RS. Moreover, more significant stimulating effects on both enzyme activity and plant growth were achieved in the treatments with manure amended inside rhizobags than outside rhizobags. The results of the present study confirmed the view that incorporation of organic manure especially into soil-root zones is an effective low-input agro-technological approach to enhancing soil fertility and minimizing phytotoxicity induced by secondary salinization.     

Optimizing nutrient availability and potential carbon sequestration in an agroecosystem

The uniformity, low cost and ease of application associated with inorganic fertilizers have diminished the use of organic nutrient sources. Concern for food safety, the environment and the need to dispose of animal and municipal wastes have focused attention on organic sources of N such as animal-derived amendments, green manures, and crop rotations. Managing organic N sources to provide sufficient N for crop growth requires knowledge of C and N decomposition over several years, particularly where manure and compost are applied. We report a comparison of compost and chemical fertilizer, use of a corn-corn-soybean-wheat rotation compared to continuous corn and the use of cover crops. Nitrogen (150 d) and C incubations (317 d) were conducted to determine the effect of cropping system and nutrient management on: N mineralization potential (NMP), the mineralizable organic N pool (N_o), the mean residence time (MRT) of No, C mineralization (C_min), and soil organic carbon (SOC) pool sizes and fluxes. Compost applications over 6 y increased the resistant pool of C by 30% and the slow pool of C by 10%. The compost treatment contained 14% greater soil organic C than the fertilizer management. Nitrogen was limiting on all compost treatments with the exception of first year corn following wheat fallow and clover cover crop. The clover cover crop and wheat-fallow increased inorganic N in both nutrient managements. We recommend that growers adjust their N fertilizer recommendation to reflect the quantity and timing of N mineralized from organic N sources and the N immobilization that can be associated with compost or other residue applications. Proper management of nutrients from compost, cover crops and rotations can maintain soil fertility and increase C sequestration.     

Temperature sensitivity of soil respiration in different ecosystems in China

Understanding the sensitivity of soil respiration to temperature change and its impacting factors is an important base for accurately evaluating the response of terrestrial carbon balance to future climatic change, and thus has received much recent attention. In this study, we synthesized 161 field measurement data from 52 published papers to quantify temperature sensitivity of soil respiration in different Chinese ecosystems and its relationship with climate factors, such as temperature and precipitation. The results show that the observed Q₁₀ value (the factor by which respiration rates increase for a 10 °C increase in temperature) is strongly dependent on the soil temperature measurement depth. Generally, Q₁₀ significantly increased with the depth (0 cm, 5 cm, and 10 cm) of soil temperature measuring point. Different ecosystem types also exhibit different Q₁₀ values. In response to soil temperature at the depth of 5 cm, alpine meadow and tundra has the largest Q₁₀ value with magnitude of 3.05 ± 1.06, while the Q₁₀ value of evergreen broadleaf forests is approximately half that amount (Q₁₀ = 1.81 ± 0.43). Spatial correlation analysis also shows that the Q₁₀ value of forest ecosystems is significantly and negatively correlated with mean annual temperature (R = −0.51, P < 0.001) and mean annual precipitation (R = −0.5, P < 0.001). This result not only implies that the temperature sensitivity of soil respiration will decline under continued global warming, but also suggests that such acclimation of soil respiration to warming should be taken into account in forecasting future terrestrial carbon cycle and its feedback to climate system.