13C NMR studies of organic matter in whole soils: H. A case study of some Rothamsted soils

Nuclear magnetic resonance (NMR) spectra were obtained for solid samples of whole soils from three long–term field sites at Rothamsted Experimental Station, UK. In all sites, soil organic matter content was either increasing or decreasing due to contrasted long–continued treatments. Two soils were from Highfield, one from under old grassland (47 g organic C kg^?1) and one from an area kept as bare fallow following ploughing of grass 21 years previously (14 g organic C kg^?1). Three soils were taken from Broadbalk, two from plots within the Broadbalk Continuous Wheat Experiment which had received no fertilizer or animal manure annually for 148 years (7 and 27 g organic C kg^?1, respectively) and one from Broadbalk Wilderness, wooded section (38 g organic C kg^?1). Broadbalk Wilderness was arable until 1881 and has reverted to deciduous woodland in the subsequent 110 years. Two soils were from Geescroft, one from an arable field (9 g organic C kg^?1) and one from Geescroft Wilderness (35 g organic C kg^?1) which began reversion to deciduous woodland at the same time as Broadbalk Wilderness but is now acid (pH = 4.2) in contrast to Broadbalk which is calcareous (pH = 7.3). Solid–state ¹³C NMR spectra were obtained on a 300–MHz instrument using cross polarization (CP) and magic angle spinning (MAS). All samples exhibited peaks in the following spectral regions: 0–45 ppm (alkyl), 45–60 ppm (methoxyl, carbohydrate and derivatives), 60–110 ppm (carbohydrates and derivatives, C–α of peptides), 110–160 ppm (aromatics) and 160–185 ppm (carboxyl groups and derivatives). Within the spectrum of a specific sample it was not possible to determine the relative proportions of soil organic carbon in the different forms identified because a range of factors can potentially alter the relative areas of peaks in different regions of the spectrum. However, from a comparison of relative peak areas within a set of soils from a given site, differing only in organic matter content, information can be deduced regarding the forms of C that are more or less subject to change in response to land use or management. At all sites carbohydrate C appears to be the form that is most subject to change, suggesting that it is an ‘active’ fraction compared with the other forms. It was greatest where organic matter inputs were greatest (due to inputs of farmyard manure or reversion to woodland) and declined relative to other forms following ploughing of old grassland. Alkyl C increased as total C accumulated but did not decline relative to other forms following ploughing of grass. One reason for the non–quantitative nature of the soil ¹³C CPMAS spectra was a short (approximately 1 ms) component of the rotating–frame T_I relaxation time for H nuclei (T_1pH). This problem was not overcome by acquiring data at – 60°C. In principle, solid–state spectra of soils obtained by direct polarization (i.e. without CP) might produce quantitative results, but the low C content of most mineral soils (10–50 g C kg^?1) precludes this, given current instrumentation.     

Changes in soil chemistry accompanying acidification over more than 100 years under woodland and grass at Rothamsted Experimental Station, UK

We have examined the effect that acid deposition and other sources of acidity have had over the last 110–140 years on soil under woodland (Broadbalk and Geescroft Wildernesses) and grassland (Park Grass) comprising some of the Classical Experiments at Rothamsted Experimental Station. Changes in soil chemistry have been followed by analysing some of the unique archive of stored samples for pH, water-soluble and exchangeable base cations, aluminium, iron and manganese, exchangeable acidity, cation exchange capacity (CEC) and soluble anions. Proton balances and historical data show the importance of acid deposition to acidification and concomitant changes in the chemistry of the soil. The pH of the surface soil of Geescroft Wilderness has fallen from 6.2 to 3.8 since 1883. The decrease in the pH of the unlimed, unfertilized plot on Park Grass was less over a similar period (from pH 5.2 to 4.2), illustrating the significant effect of the woodland canopy on the interception of acidifying pollutants. The effect of increasing acidity on the soil chemistry of Geescroft Wilderness is seen in its decreasing base saturation and CEC, with base cations moving down the soil profile. Clay minerals are being irreversibly weathered, and Mn and Al progressively mobilized, so that today Al occupies 70% of the exchange complex in the surface soil. Even with present reductions in sulphur deposition critical loads for sulphur, nitrogen and acidity are still exceeded. Such semi-natural ecosystems are unsustainable under the current climate of pollution.     

Modeling long-term soil carbon dynamics and sequestration potential in semi-arid agro-ecosystems

Long-term soil carbon (C) dynamics in agro-ecosystems is controlled by interactions of climate, soil and agronomic management. A modeling approach is a useful tool to understand the interactions, especially over long climatic sequences. In this paper, we examine the performance of the Agricultural Production Systems sIMulator (APSIM) to predict the long-term soil C dynamics under various agricultural practices at four semi-arid sites across the wheat-belt of eastern Australia. We further assessed the underlying factors that regulate soil C dynamics in the top 30 cm of soil through scenario analysis using the validated model. The results show that APSIM is able to predict aboveground biomass production and soil C dynamics at the study sites. Scenario analyses indicate that nitrogen (N) fertilization combined with residue retention (SR) has the potential to significantly slow or reverse the loss of C from agricultural soils. Optimal N fertilization (N_opt) and 100% SR, increased soil C by 13%, 46% and 45% at Warra, Wagga Wagga and Tarelee, respectively. Continuous lucerne pasture was the most efficient strategy to accumulate soil C, resulting in increases of 49%, 57% and 50% at Warra, Wagga Wagga and Tarlee, respectively. In contrast, soil C decreases regardless of agricultural practices as a result of cultivation of natural soils at the Brigalow site. Soil C input, proportional to the amount of retained residue, is a significant predictor of soil C change. At each site, water and nitrogen availability and their interaction, explain more than 59% of the variation in soil C. Across the four sites, mean air temperature has significant (P < 0.05) effects on soil C change. There was greater soil C loss at sites with higher temperature. Our simulations suggest that detailed information on agricultural practices, land use history and local environmental conditions must be explicitly specified to be able to make plausible predictions of the soil C balance in agro-ecosystems at different agro-ecological scales.     

Microbial biomass dynamics in recently air-dried and rewetted soils compared to others stored air-dry for up to 103 years

Our aim was to compare the soil microbial biomass concentration and its activity (measured as CO₂-C evolved) following the rewetting and aerobic incubation of soils which have previously been stored air-dry for different periods. Some of the soils have been stored in the Rothamsted sample archive for 103 years, others were comparable freshly sampled soils following air-drying and rewetting and other soils were stored air-dry for 2 years then rewetted for the work described here. Following air-drying, soil ATP concentrations were variable in recently air-dried soil, comprising about 10-35% of the initial ATP concentrations in fresh soil. Following rewetting, the percentage recovery of ATP increased in all soils by 7 days, then declined to between 73% and 87% of the original ATP concentration in the air-dried soils by day 12. Storage of air-dried soils decreased the ability of the microbial biomass to restore its ATP concentrations. For example, the ATP concentration in a soil sampled from stubbed (i.e. tree seedling, saplings and bushes cut frequently to ground level) grassland of the Broadbalk continuous wheat experiment at Rothamsted then air-dried for 2 years was only about 14% of that in the fresh soil at 2 days after rewetting. In other soils from the Hoosfield Barley Experiment, also at Rothamsted, previously given NPK or FYM since 1852, and sampled then stored air-dry for between 13 and 83 years, from 52% to 57% of the ATP in the comparable fresh soils was measured at two days after rewetting. The soil ATP concentration then changed little more up to 12 days. One of the most interesting findings was that while the microbial biomass ATP concentration in the above NPK soils only ranged from about 2 to 4 μmol ATP g⁻¹ biomass C, in the FYM soil the microbial biomass ATP concentrations (range 11.5-13.6 μmol ATP g⁻¹ biomass C) were the same as we repeatedly measure in fresh moist aerobic soil. We do not yet know the reasons for this. More than twice as much CO₂-C was evolved from the long-term stored soils than from freshly sampled ones. However, the specific respiration of the microbial biomass did not change much after the first 12 years of storage, indicating that loss of viability mainly occurred in the earlier years.     

Variability in soil properties at different spatial scales (1 m-1 km) in a deciduous forest ecosystem

The purpose of this research was to test the hypothesis that variability in 11 soil properties, related to soil texture and soil C and N, would increase from small (1 m) to large (1 km) spatial scales in a temperate, mixed-hardwood forest ecosystem in east Tennessee, USA. The results were somewhat surprising and indicated that a fundamental assumption in geospatial analysis, namely that variability increases with increasing spatial scale, did not apply for at least five of the 11 soil properties measured over a 0.5-km² area. Composite mineral soil samples (15 cm deep) were collected at 1, 5, 10, 50, 250, and 500 m distances from a center point along transects in a north, south, east, and westerly direction. A null hypothesis of equal variance at different spatial scales was rejected (P?0.05) for mineral soil C concentration, silt content, and the C-to-N ratios in particulate organic matter (POM), mineral-associated organic matter (MOM), and whole surface soil. Results from different tests of spatial variation, based on coefficients of variation or a Mantel test, led to similar conclusions about measurement variability and geographic distance for eight of the 11 variables examined. Measurements of mineral soil C and N concentrations, C concentrations in MOM, extractable soil NH₄-N, and clay contents were just as variable at smaller scales (1-10 m) as they were at larger scales (50-500 m). On the other hand, measurement variation in mineral soil C-to-N ratios, MOM C-to-N ratios, and the fraction of soil C in POM clearly increased from smaller to larger spatial scales. With the exception of extractable soil NH₄-N, measured soil properties in the forest ecosystem could be estimated (with 95% confidence) to within 15% of their true mean with a relatively modest number of sampling points (n?25). For some variables, scaling up variation from smaller to larger spatial domains within the ecosystem could be relatively easy because small-scale variation may be indicative of variation at larger scales.     

Soil carbon and related soil properties along a soil type and land‐use intensity gradient,New South Wales,Australia

The aim of this study was to systematically quantify differences in soil carbon and key related soil properties along a replicated land‐use intensity gradient on three soil landscapes in northwest New South Wales, Australia. Our results demonstrate consistent land‐use effects across all soil types where C, N and C:N ratio were in the order woodland > unimproved pasture = improved pasture > cultivation while bulk density broadly showed the reverse pattern. These land‐use effects were largely restricted to the near surface soil layers. Improved pasture was associated with a significant soil acidification, indicating that strategies to increase soil carbon through pasture improvement in these environments might also have associated soil degradation issues. Total soil carbon stocks were significantly larger in woodland soils, across all soil types, compared with the other land‐uses studied. Non‐wooded systems, however, had statistically similar carbon stocks and this pattern persisted whether or not carbon quantity was corrected for equivalent mass. Our results suggest that conversion from cultivation to pasture in this environment would yield between 0.06 and 0.15 t C/ha/yr which is at the lower end of predicted ranges in Australia and well below values measured in other cooler, wetter environments. We estimate that a 10% conversion rate (cultivation to pasture) across NSW would yield around 0.36 Mt CO₂‐e/yr which would contribute little to emission reductions in NSW. We conclude that carbon accumulation in agricultural soils in this environment might be more modest than current predictions suggest and that systematically collected, regionally specific data are required for the vegetation communities and full range of land‐uses before accurate and reliable predictions of soil carbon change can be made across these extensive landscapes.     

Local variation in climate and land use during the time of the major kingdoms of the Tigray Plateau in Ethiopia and Eritrea

The Tigray Plateau of Ethiopia and Eritrea is vulnerable to environmental change, yet environmental influences on the rise and fall of the civilizations that once existed there are almost unexplored. We sampled sections of gully walls for palaeoenvironmental proxies from two sites: 1) Adi Kolen on the southern outskirts of the Plateau's most developed former empire, the Aksumite, and 2) Adigrat near polities dating to at least ca. 3000 cal yr BP. A multi-proxy approach for examining local variation in palaeoenvironments was evaluated that included stable isotopic and elemental analyses (δ¹³C_SOM, δ¹⁵N, %TOC, and %TN) of soil, and charcoal identification. An increase in δ¹⁵N values from older soils in Adi Kolen (4400 cal yr BP) and Adigrat (2900 cal yr BP) until 1200 cal yr BP is not explained by changes in δ¹⁵N that occur with time in an unchanging environment. It may instead indicate an overall decrease in rainfall from the earlier times until 1200 cal yr BP. In one Adigrat section, the decreases in organic δ¹³C and increases in C/N molar ratios from older to younger soil could have resulted from changes that occur over time, per se. In the remaining sections, however, δ¹³C_SOM trends more likely reflect changes in the biomass of C₄ relative to C₃ plants (% C₄ biomass). Changes in% C₄ biomass may reflect climate and/or land use. Deciphering which may be aided by analyses of the other proxies. Identified charcoal suggests that both sites supported some juniper forest types until very recently but that forests may have been a more important and dynamic component of Adigrat's vegetation history than Adi Kolen's. If environment affected the trajectories of the kingdoms of the Tigray Plateau, these results suggest that the exact nature of the changes in climate differed among kingdoms. The kingdoms prior to 1200 cal yr BP may have been exposed to increasing aridity punctuated with relatively wetter intervals. Thereafter, general changes in climate are not apparent. Land clearing dynamics are likely to have had a more consistent effect on the trajectories of kingdoms than climate changes.     

Biochemical characterization of urban soil profiles from Stuttgart, Germany

The knowledge of biochemical properties of urban soils can help to understand nutrient cycling in urban areas and provide a database for urban soil management. Soil samples were taken from 10 soil profiles in the city of Stuttgart, Germany, differing in land use—from an essentially undisturbed garden area to highly disturbed high-density and railway areas. A variety of soil biotic (microbial biomass, enzyme activities) and abiotic properties (total organic C, elemental C, total N) were measured up to 1.9 m depth. Soil organic matter was frequently enriched in the subsoil. Microbial biomass in the top horizons ranged from 0.17 to 1.64 g C kg⁻¹, and from 0.01 to 0.30 g N kg⁻¹, respectively. The deepest soil horizon at 170-190 cm, however, contained 0.12 g C kg⁻¹ and 0.05 kg N kg⁻¹ in the microbial biomass. In general, arylsulphatase and urease activity decreased with depth but in three profiles potentially mineralizable N in the deepest horizons was higher than in soil layers directly overlying. In deeply modified urban soils, subsoil beside topsoil properties have to be included in the evaluation of soil quality. This knowledge is essential because consumption of natural soils for housing and traffic has to be reduced by promoting inner city densification.     

Effects of compost and of bacterial cells on the decontamination and the chemical and biological properties of an agricultural soil artificially contaminated with phenanthrene

Polycyclic aromatic hydrocarbons (PAHs) are highly recalcitrant widespread environmental pollutants. Bioremediation, accomplished by the introduction of PAH-degrading microorganisms (bioaugmentation) and/or by applying additional nutrients (biostimulation) into a contaminated system is a valuable alternative to traditional chemical and physical treatments for the decontamination of PAH-contaminated soils. We investigated on a laboratory scale the fate of phenanthrene (Phe), selected to represent PAHs, when added to a fresh, agricultural soil with no history of PAH contamination. The relative effect of compost (C), applied at two different doses (C1=0.27%, and C2=0.83%, corresponding to 10 and 30 t ha⁻¹, respectively), and the efficiency of a Phe-degrading bacterial culture inoculated into the soil (S) and soil-compost (S-C1 and S-C2) systems were investigated. Changes in various functionally related properties such as microbial biomass, basal respiration, and soil hydrolases and oxido-reductases activities were measured over time. The variations of the main physical and chemical properties were also monitored. The soil showed an intrinsic capability for degrading Phe, and this was enhanced and stimulated by the lower compost dose (a decrease of the extractable Phe from 70% to about 50% of that initially added, and higher kinetic Phe disappearance constants). A simultaneous, rapid increase of soil respiration and microbial biomass, and higher phosphatase and arylsulphatase activities were measured, suggesting that microbial growth and activity had increased. The inoculation with Phe-degrading bacterial cells strongly accelerated the Phe degradation. After 15 d of incubation, the residual Phe decreased to 10% in S and S-C1 and to zero in S-C2, respectively. No apparent effects were observed for the higher compost dose. Several of the soil properties showed differentiated responses to the presence of the Phe, the compost and/or the exogenous culture. As a general response, soil systems with and without the inoculated cells showed similar trends for several of the measured enzymatic properties (e.g. phosphatase, arylsulphatase, β-glucosidase and urease activities), indicating that the intrinsic soil enzymatic activity was not affected by the exogenous microorganisms. Temporary and permanent changes were observed for several of the properties investigated, thereby providing useful information on the impact of Phe on soil metabolic activity.     

The proportional mineralisation of microbial biomass and organic matter caused by air-drying and rewetting of a grassland soil

During the first few days after rewetting of an air-dried soil (AD-RW), microbial activity increases compared to that in the original moist soil, causing increased mineralisation (a flush) of soil organic carbon (C) and other nutrients. The AD-RW flush is believed to be derived from the enhanced mineralisation of both non-biomass soil organic matter (due to its physical release and enhanced availability) and microbial biomass killed during drying and rewetting. Our aim was to determine the effects of AD-RW on the mineralisation of soil organic matter and microbial biomass during and after repeated AD-RW cycles and to quantify their proportions in the CO₂-C flushes that resulted. To do this, a UK grassland soil was amended with ¹⁴C-labelled glucose to label the biomass and then given five AD-RW cycles, each followed by 7 d incubation at 25 °C and 50% water holding capacity. Each AD-RW cycle increased the amount of CO₂-C evolved (varying from 83 to 240 μg g⁻¹ soil), compared to the control with, overall, less CO₂-C being evolved as the number of AD-RW cycles increased. In the first cycle, the amount of biomass C decreased by 44% and microbial ATP by 70% while concentrations of extractable C nearly doubled. However, all rapidly recovered and within 1.3 d after rewetting, biomass C was 87% and ATP was 78% of the initial concentrations measured prior to air-drying. Similarly, by 2 d, extractable organic C had decreased to a similar concentration to the original. After the five AD-RW cycles, the amounts of total and ¹⁴C-labelled biomass C remaining in the soil accounted for 60 and 40% of those in the similarly incubated control soil, respectively. Soil biomass ATP concentrations following the first AD-RW cycle remained remarkably constant (ranging from about 10 to 14 μmol ATP g⁻¹ biomass C) and very similar to the concentration in the fresh soil prior to air-drying. We developed a simple mathematical procedure to estimate the proportion of CO₂-C derived from biomass C and non-biomass C during AD-RW. From it, we estimate that, over the five AD-RW cycles, about 60% of the CO₂-C evolved came from mineralisation of non-biomass organic C and the remainder from the biomass C itself.     

CO2 emission in an intensively cultivated loam as affected by long-term application of organic manure and nitrogen fertilizer

A long-term field experiment was conducted to examine the influence of mineral fertilizer and organic manure on the equilibrium dynamics of soil organic C in an intensively cultivated fluvo-aquic soil in the Fengqiu State Key Agro-Ecological Experimental Station (Fengqiu county, Henan province, China) since September 1989. Soil CO₂ flux was measured during the maize and wheat growing seasons in 2002-2003 and 2004 to evaluate the response of soil respiration to additions and/or alterations in mineral fertilizer, organic manure and various environmental factors. The study included seven treatments: organic manure (OM), half-organic manure plus half-fertilizer N (NOM), fertilizer NPK (NPK), fertilizer NP (NP), fertilizer NK (NK), fertilizer PK (PK) and control (CK). Organic C in soil and the soil heavy fraction (organo-mineral complex) was increased from 4.47 to 8.61 mg C g⁻¹ and from 3.32 to 5.68 mg C g⁻¹, respectively, after the 13 yr application of organic manure. In contrast, organic C and the soil heavy fraction increased in NPK soil to only 5.41 and 4.38 mg C g⁻¹, respectively. In the CK treatment, these parameters actually decreased from the initial C concentrations (4.47 and 3.32 mg C g⁻¹) to 3.77 and 3.11 mg C g⁻¹, respectively. Therefore, organic manure efficiently elevated soil organic C. However, only 66% of the increased soil organic C was combined with clay minerals in the OM treatment. Cumulative soil CO₂ emissions from inter-row soil in the OM and NPK treatments were 228 and 188 g C m⁻² during the 2002 maize growing season, 132 and 123 g C m⁻² during the 2002/2003 wheat growing season, and 401 and 346 g C m⁻² yr⁻¹ in 2002-2003, respectively. However, during the 2004 maize growing season, cumulative soil CO₂ emissions were as high as 617 and 556 g C m⁻², respectively, due to the contribution of rhizosphere respiration. The addition of organic manure contributed to a 16% increase in soil CO₂ emission in 2002-2003 (compared to NPK), where only 27%, 36% and 24% of applied organic C was released as CO₂ during the 2002 and 2004 maize growing seasons and in 2002-2003, respectively. During the 2002/2003 wheat growing season, soil CO₂ flux was significantly affected by soil temperature below 20 °C, but by soil moisture (WFPS) during the 2004 maize growing season at soil temperatures above 18 °C. Optimum soil WFPS for soil CO₂ flux was approximately 70%. When WFPS was below 50%, it no longer had a significant impact on soil CO₂ flux during the 2002 maize growing season. This study indicates the application of organic manure composted with wheat straw may be a preferred strategy for increasing soil organic C and sequestering C in soil.     

Characteristics of microbial biomass and soil organic matter in newly reclaimed wetland rice soils

Microbial biomass C, N, total organic C, N and mineralizable N were measured in newly reclaimed wetland sandy loam rice soil with a very low nutrient status. Microbial biomass C increased 5.4–10.4 times due to application of barnyard manure, but decreased drastically to 24–27% during rice cultivation. Organic C and N contents also decreased during cultivation, but to a lesser extent to 59–76%. At the tillering stage of the rice plant, microbial biomass N was highly correlated with mineralizable N (r=0.986).     

Ecosystem services in grassland associated with biotic and abiotic soil parameters

Biotic soil parameters have so far seldom played a role in practical soil assessment and management of grasslands. However, the ongoing reduction of external inputs in agriculture would imply an increasing reliance on ecosystem self-regulating processes. Since soil biota play an important role in these processes and in the provision of ecosystem services, biological soil parameters should be an integral part of soil assessment. The general objective of the current study is to investigate to what extent biotic soil parameters provide additional value in soil quality assessment of grassland on sandy soils. We measured abiotic and biotic soil parameters together with process parameters underlying ecosystem services in 20 permanent production grasslands. Cross-validated stepwise regression was used to identify abiotic and biotic soil parameters that explained the soil ecosystem services soil structure maintenance, water regulation, supply of nutrients, and grassland production, respectively.Process parameters underlying the ecosystem service soil structure maintenance such as bulk density and the percentage of sub-angular blocky elements were mainly influenced by SOM and its qualities. The correlations between penetration resistance at 0-10 cm and the percentage of soil crumbs with earthworms suggested a relationship to earthworm activity. Parameters underlying the service of water regulation showed no clear relationship to biotic soil parameters. Water infiltration rate in the field was explained by the penetration resistance at 10-20 cm. Process parameters underlying the service of nutrients’ supply such as the potentially mineralizable C and N were mainly determined by soil total N. The potential C and N mineralization were more related to biotic soil parameters, whereby each parameter was the other’s antithesis. The grassland production without N fertilization viz. the nitrogen supply capacity of the soil measured as N yield, was mainly explained by soil organic matter (SOM) and soil moisture, and to a lesser extent by soil total N. One gram of SOM per kg of dry soil corresponded to 3.21 kg N yield ha⁻¹, on top of a constant of 15.4 kg N ha⁻¹. The currently applied calculations in the Dutch grassland fertilization recommendation, underestimated in 85% of the production grasslands, the measured nitrogen supply capacity of the soil by on average 42 kg N ha⁻¹ (31%). This legitimizes additional research to improve the currently applied recommendations for sandy soils. The response of N yield to N fertilization ranged from 35 to 102%. This wide range emphasizes the importance of a better recommendation base to target N fertilizer. The response of N yield to N fertilization was predicted by the total number of enchytraeids, the underlying mechanism of which needs further investigation on different soil types. This knowledge can be important for the optimal use of fertilizer and its consequences for environmental quality.     

Factors controlling decomposition of soil organic matter in fallow systems of the high tropical Andes: A field simulation approach using C- and N-labelled plant material

N-rich (C:N=27) and N-poor (C:N=130) wheat straw, labelled with ¹⁴C and ¹⁵N, was incubated for 2 yr in two major ecosystems of the upper elevation belt of cultivation in the high Andes: the moist Paramo (precipitation=1329 mm, altitude=3400 m asl, Andes of Merida, Venezuela) and the dry Puna (precipitation=370 mm, altitude=3800 m asl, Central Altiplano, Bolivia). The experiment was installed in young (2 yr) and old (7 yr) fallow plots. The following soil analyses were performed at nine sampling occasions: soil moisture, total-¹⁴C and -¹⁵N, and Microbial Biomass (MB)-¹⁴C and -¹⁵N. The measured data were fitted by the MOMOS-6 model (a process based model, with five compartments: labile and stable plant material, MB, and labile (HL) and stable humus (HS)) coupled with the SAHEL model (soil moisture prediction) using daily measured and/or predicted meteorological data. The aim was to understand how (1) the climatic conditions, (2) the quality of plant material, (3) the fallow age and (4) the soil properties affect the cycling of C and N within the soil organic matter system.The fallow age (2 and 7 yr) did not affect the measured data or the model predictions, indicating that in these systems the decomposition potential is not affected by fallow length. During the short initial active decomposition phase, the labile plant material was quickly exhausted, enabling a build up of MB and of HL. During the low activity phase, that covered 4/5 of the time of exposure, the MB size decreased slowly and the HL pool was progressively exhausted as it was reused by the MB as substrate. The HL compartment was directly or indirectly the major source for the inorganic ¹⁵N production. If the C:N ratio of the added plant material increased, the model predicted (1) a reduction of the decomposition rates of the plant material (essentially the stable plant material) and (2) an increased mortality of the MB which increased the production of HL (microbial cadavers and metabolites). Thus the essential effect of the slower decomposition due to the N-poor plant material was a higher accumulation of C and N in the HL and its slower recycling by the MB during the low activity phase. The labelling experiment allows to understand the higher soil native organic matter content in Paramo soils compared to Puna. The large sequestration of organic matter generally observed in the Paramo soils can be explained by two abiotic factors: the unfavourable soil microstructure and the accumulation of free aluminium linked to the climatic and acid soil conditions, inhibiting the microbial activity physically and chemically.     

Impact of cycloheximide addition on adenylates in soil

Cycloheximide inhibits specifically the ribosomal protein synthesis of eukaryotic cells, i.e. the metabolism of soil fungi. We measured cycloheximide effects on adenylates in 20 different soils (0-10 cm depth) from arable, grass and forest land with a large variety of soil properties. The aims were (1) to assess the interactions between cycloheximide effects and soil properties and (2) to prove the relationship between cycloheximide effects on ATP and the ergosterol-to-microbial biomass C ratio, which is an indicator for the fungal proportion of the total microbial biomass. The adenylates ATP, ADP and AMP were measured 6 h after adding either 10 mg cycloheximide per gram soil in combination with 24 mg talcum per gram soil or 24 mg talcum per gram soil solely. The medians of the relative increases in AMP and ADP were 45 and 25% and the medians of the relative decreases in ATP and adenylates were −36 and −12%. These changes in adenylate composition lead to a cycloheximide-induced relative decrease in the adenylate energy charge level of 15%. The relative decrease in ATP content after cycloheximide addition was significantly correlated with the ATP-to-microbial biomass C ratio, but not with the ergosterol-to-microbial biomass C ratio. The absolute increase in ADP and the absolute decrease in ATP were affected by the clay content according to principal component analysis. The reduction of the ATP-to-microbial biomass C ratio indicates that this ratio had the potential of being an important ecotoxicological indicator of direct toxic effects of organic pollutants on soil microorganisms.     

Long-term tillage effects on the distribution patterns of microbial biomass and activities within soil aggregates

The effects of tillage on the interaction between soil structure and microbial biomass vary spatially and temporally for different soil types and cropping systems. We assessed the relationship between soil structure induced by tillage and soil microbial activity at the level of soil aggregates. To this aim, organic C (OC), microbial biomass C (MBC) and soil respiration were measured in water-stable aggregates (WSA) of different sizes from a subtropical rice soil under two tillage systems: conventional tillage (CT) and a combination of ridge with no-tillage (RNT). Soil (0–20 cm) was fractionated into six different aggregate sizes (> 4.76, 4.76–2.0, 2.0–1.0, 1.0–0.25, 0.25–0.053, and < 0.053 mm in diameter). Soil OC, MBC, respiration rate, and metabolic quotient were heterogeneously distributed among soil aggregates while the patterns of aggregate-size distribution were similar among properties, regardless of tillage system. The content of OC within WSA followed the sequence: medium-aggregates (1.0–0.25 mm and 1.0–2.0 mm) > macro-aggregates (4.76–2.0 mm) > micro-aggregates (0.25–0.053 mm) > large aggregates (> 4.76 mm) > silt + clay fractions (< 0.053 mm). The highest levels of MBC were associated with the 1.0–2.0 mm aggregate size class. Significant differences in respiration rates were also observed among different sizes of WSA, and the highest respiration rate was associated with 1.0–2.0 mm aggregates. The C_mic/C_org was greatest for the large-macroaggregates regardless of tillage regimes. This ratio decreased with aggregate size to 1.0–0.25 mm. Soil metabolic quotient (qCO₂) ranged from 3.6 to 17.7 mg CO₂ g^− 1 MBC h^− 1. The distribution pattern of soil microbial biomass and activity was governed by aggregate size, whereas the tillage effect was not significant at the aggregate scale. Tillage regimes that contribute to greater aggregation, such as RNT, also improved soil microbial activity. Soil OC, MBC and respiration rate were at their highest levels for 1.0–2.0 mm aggregates, suggesting a higher biological activity at this aggregate size for the present ecosystem.     

Variation of soil respiration at three spatial scales: Components within measurements, intra-site variation and patterns on the landscape

Soil respiration is an important component of terrestrial carbon cycling and can be influenced by many factors that vary spatially. This research aims to determine the extent and causes of spatial variation of soil respiration, and to quantify the importance of scale on measuring and modeling soil respiration within and among common forests of Northern Wisconsin. The potential sources of variation were examined at three scales: [1] variation among the litter, root, and bulk soil respiration components within individual 0.1 m measurement collars, [2] variation between individual soil respiration measurements within a site (<1 m to 10 m), and [3] variation on the landscape caused by topographic influence (100 m to 1000 m). Soil respiration was measured over a two-year period at 12 plots that included four forest types. Root exclusion collars were installed at a subset of the sites, and periodic removal of the litter layer allowed litter and bulk soil contributions to be estimated by subtraction. Soil respiration was also measured at fixed locations in six northern hardwood sites and two aspen sites to examine the stability of variation between individual measurements. These study sites were added to an existing data set where soil respiration was measured in a random, rotating, systematic clustering which allowed the examination of spatial variability from scales of <1 m to 100+ m. The combined data set for this area was also used to examine the influence of topography on soil respiration at scales of over 1000 m by using a temperature and moisture driven soil respiration model and a 4 km² digital elevation model (DEM) to model soil moisture. Results indicate that, although variation of soil respiration and soil moisture is greatest at scales of 100 m or more, variation from locations 1 m or less can be large (standard deviation during summer period of 1.58 and 1.28 μmol CO₂ m⁻² s⁻¹, respectively). At the smallest of scales, the individual contributions of the bulk soil, the roots, and the litter mat changed greatly throughout the season and between forest types, although the data were highly variable within any given site. For scales of 1-10 m, variation between individual measurements could be explained by positive relationships between forest floor mass, root mass, carbon and nitrogen pools, or root nitrogen concentration. Lastly, topography strongly influenced soil moisture and soil properties, and created spatial patterns of soil respiration which changed greatly during a drought event. Integrating soil fluxes over a 4 km² region using an elevation dependent soil respiration model resulted in a drought induced reduction of peak summer flux rates by 37.5%, versus a 31.3% when only plot level data was used. The trends at these important scales may help explain some inter-annual and spatial variability of the net ecosystem exchange of carbon.     

Climate and vegetation determine soil organic matter status in an alpine inner-tropical soil catena in the Fan Si Pan Mountain,Vietnam

High mountain ecosystems are generally considered to be particularly sensitive to global climate change. Studies of pedogenesis associated with altitudinal variation, vegetation type and soil carbon content on the same type of parent rock are very limited in inter-tropical mountain areas. Therefore the altitudinal variation of soil pedogenesis through 9 selected profiles from the altitude of 1340 m to 3143 m asl, the summit of the Fan Si Pan Mountain, in the north of Vietnam was examined. Fan Si Pan Mountain is composed of a homogenous alkaline granite rock and is the highest point of the Inter-tropical Continental Asia. The Soil Organic Matter properties (C, N, δ¹³C and δ¹⁵N contents) of the different grain-size fractions of the topsoil of 4 selected profiles corresponding to different ecosystems were also examined.     

Short-term effects of olive mill waste water (OMW) on chemical and biochemical properties of a semiarid Mediterranean soil

Olive mill waste water (OMW), a by-product of the olive mill industry, is produced in large amounts in Mediterranean countries. Olive mill waste water contains a high organic load, substantial amounts of plant nutrients but also several compounds with recognized toxicity towards living organisms. Moreover, OMW may represent a low cost source of water. Thus, the use of OMW for soil fertigation is a valuable option for its disposal, provided that its impact on soil chemical and biochemical properties is established. Investigations were performed on the short-term influence of OMW on several chemical and biochemical properties of a soil from a continental semi-arid Mediterranean region (Morocco). The soil was amended with 0, 18 and 36 ml 100 g⁻¹ soil of OMW (corresponding to a field rate of 0, 40 and 80 m³ ha⁻¹, respectively) and changes in various functionally related properties such as microbial biomass, basal respiration, extractable C and N, and soil hydrolases and oxido-reductases activities were measured over time. The variations of the main physical and chemical properties as well as the residual phytotoxicity of OMW amended and non-amended soils as assessed by tomato seed germination tests were also monitored. Temporary and permanent changes in several chemical and biochemical soil properties occurred following OMW application, thus being these properties varied in sensitivity to the applied disturbance. A sudden increase of total organic C, extractable N and C, available P and extractable Mn and Fe contents were measured. Simultaneously, a rapid increase of soil respiration, dehydrogenase and urease activities and microbial biomass (at 14 day incubation) of OMW amended soils occurred. In contrast, the activities of phosphatase, β-glucosidase, nitrate reductase and diphenol oxidase decreased markedly. The soil became highly phytotoxic after OMW addition (large decline of soil germination capability), mainly at 80 m³ ha⁻¹ OMW. After 42 days' incubation, however, a complete recovery of the soil germination capability and a residual phytotoxicity of about 30% were observed with 40 and 80 m³ ha⁻¹ OMW, respectively. These findings indicate that the impact of OMW on soil properties was the result of opposite effects, depending on the relative amounts of beneficial and toxic organic and inorganic compounds present. The toxic compounds contained in OMW most likely counteracted the beneficial effect of organic substrates provided, which promoted the growth and activity of indigenous microorganisms.     

Effect of seedbed cultivation and soil macrostructure on the establishment of winter wheat (Triticum aestivum)

Soil physical properties affect the establishment of crops; these properties are influenced by cultivation incurred during seedbed preparation and vary greatly depending upon the intensity of applications. However, there is little quantified data concerning the influence of cultivation upon the precise soil structural arrangement and the effects of this on crop establishment. The dynamics of soil macrostructure properties on a range of seedbeds and how they relate to crop establishment are considered in this paper. Significant interactions between cultivation techniques, soil physical properties, the soil macropore structure of the seedbed and the interaction with crop establishment were identified. The relationship between soil structure and crop establishment was highly significant, with increased pore space reducing final establishment numbers. An improvement to a previously developed model (soil quality of establishment (SQE)) was developed following the addition of soil macrostructure properties, accounting for improved predictability of between ca. 6% and 19% of the variation accounted across soil types, environmental conditions.