Development and implementation of cost-effective strategies to manage brown rot of peach trees in Imathia,Greece

Development of cost-effective strategies to manage brown rot caused by Monilinia laxa of peach implies a better understanding of the susceptibility of different cultivars and pre-harvest contamination. This study investigated the susceptibility of 24 peach and nectarine cultivars to shoot blight caused by Monilinia spp. and found various levels of susceptibility, with the nectarine cultivar Tasty Free scored as the most susceptible. Studies on the the existence and detection of latent infections by Monilinia spp. in three peach (‘A37’, ‘Andross’, and ‘E-45’) and three nectarine (‘Venus’, ‘Fantasia’, and ‘Tasty Free’) cultivars were also conducted. The results showed that latent infections were detected only in nectarine cultivars when fruit were collected on 23 May and 22 June. In contrast, nectarine fruit collected on 7 June and all peach cultivars tested had no detectable latent infection. This study also indicated that the fungicide thiophanate methyl applied at the pit hardening stage reduced significantly the percentage of latent infection and subsequently preharvest fruit rots. Finally, a disease forecast model to predict blossom blight, caused by M. laxa, was evaluated in the Prefecture of Imathia, Greece. Trees, sprayed according to the model predictions, showed a statistically lower percentage of blighted shoots than those of unsprayed trees.     

Comparison between the N and Me3 genes conferring resistance to the root-knot nematode (Meloidogyne incognita) in genetically different pepper lines (Capsicum annuum)

Genetic resistance to Meloidogyne incognita in pepper (Capsicum annuum) has been well characterised for the N and Me3 resistance genes. However, there are no studies comparing the effects of these two genes directly or investigating the combined effects when both genes are present together. Several studies were undertaken to investigate the relationship of the N and Me3 gene systems to one another and to assess whether these two genes are allelic or truly separate genes. Two genotypes homozygous for the N gene (‘Carolina Wonder’ and ‘Charleston Belle’) and two genotypes homozygous for the Me3 gene (HDA 149 and PM 687) were compared in a replicated greenhouse test for reaction to M. incognita race 3. There were no significant differences between the resistant reactions of genotypes possessing the N or Me3 gene. Allelism tests were performed using the F2 populations of the parental genotypes HDA 149 × ‘Charleston Belle’ and HDA 149 × ‘Carolina Wonder’. The results of these studies clearly show the N and Me3 genes to be distinct, separate dominant resistance genes conferring resistance to M. incognita race 3 and not alleles of the same gene.     

Host genotype- and temperature-dependent colonizationof In vitro carnation callus cultures byFusarium oxysporum f.sp.dianthi race 2

Differentin vivo resistance/susceptibility levels of 14 carnation cultivars toFusarium oxysporum f.sp.dianthi race 2, the causal agent of Fusarium wilt disease of carnation, were also expressed in anin vitro system and assayed as the degree of fungal colonization of callus cultures at 20° C. Temperature influenced thein vitro expression of carnation resistance. An incubation temperature of 27° C increased the colonization of calli derived from both the susceptible (‘Corrida’ and ‘Ambra’) and the resistant (‘Pulcino’ and ‘Pallas’) cultivars. At 15°C, the colonization of calli derived from Pulcino and Pallas diminished significantly more than for Ambra and Corrida. Inhibition of fungal growth on resistant calli was correlated to retardation in hyphal development. Both scanning electron microscopy and light microscopy observations showed that hyphae did not penetrate into carnation cells.     

Rapid screening of <Emphasis Type="Italic">Musa</Emphasis> species for resistance to Fusarium wilt in an <Emphasis Type="Italic">in vitro</Emphasis> bioassay

In order to accelerate breeding and selection for disease resistance to Fusarium wilt, it is important to develop bioassays which can differentiate between resistant and susceptible cultivars efficiently. Currently, the most commonly used early bioassay for screening Musa genotypes against Fusarium oxysporum f. sp. cubense (Foc) is a pot system, followed by a hydroponic system. This paper investigated the utility of in vitro inoculation of rooted banana plantlets grown on modified medium as a reliable and rapid bioassay for resistance to Foc. Using a scale of 0 to 6 for disease severity measurement, the mean final disease severities of cultivars expressing different levels of disease reaction were significantly different (P ≤ 0.05). Twenty-four days after inoculation with Foc tropical race 4 at 10⁶ conidia ml⁻¹, the plantlets of two susceptible cultivars had higher final disease severities than that of four resistant cultivars. Compared with ‘Guangfen No.1’, ‘Brazil Xiangjiao’ is highly susceptible to tropical race 4 and its mean final disease severity was the highest (5.27). The plantlets of moderately resistant cultivar ‘Formosana’ had a mean final disease severity (3.53) lower than that of ‘Guangfen No.1’ (4.33) but higher than that of resistant cultivars: ‘Nongke No.1’, GCTCV-119, and ‘Dongguan Dajiao’ (1.87, 1.73, and1.53, respectively). Promising resistant clones acquired through non-conventional breeding techniques such as in vitro selection, genetic transformation, and protoplast fusion could be screened by the in vitro bioassay directly. Since there is no acclimatization stage for plantlets used in the bioassay, it helps to improve banana breeding efficiency.     

Physiologic races ofFusarium oxysporum f.sp.melonis in the southeastern anatolia region of turkey and varietal reactions to races of the pathogen

Thirty-four isolates ofFusarium oxysporum f.sp.melonis (F.o.m.) obtained from 205 fields in melon-producing areas in the southeastern Anatolia Region of Turkey were identified on the basis of colony morphology and pathogenicity by the root dip method. In this region the mean prevalence of wilt disease was 88.1% and the mean incidence of disease was 47.5%. Physiologic races 0, 1, 2, and 1,2 of the pathogen were determined by their reactions on differential melon cultivars ‘Charentais T,’ ‘Isoblon’, ‘Isovac’ and ‘Margot’ in the greenhouse. Race 1,2, representating 58.8% (20/34) of all isolates, was widely distributed. Of the other pathogenic isolates, eight were identified as race 0, five as race 1, and one as race 2. This is the first report of physiologic races ofF.o.m. in Turkey. Of 44 melon cultivars tested in the greenhouse for resistance toF.o.m. races, 36 were found to be moderately resistant to race 0, 17 were susceptible to race 1,2, 34.1% were highly resistant to race 1, and 52.2% had moderate resistance to race 2. http://www.phytoparasitica.org posting July 16, 2002.     

Molecular and biological characterization of <Emphasis Type="Italic">Chrysanthemum stem necrosis virus</Emphasis> isolates from distinct regions in Japan

Three isolates of Chrysanthemum stem necrosis virus (CSNV) were obtained from chrysanthemum plants in distinct regions of Japan in 2006 and 2007. All the original host plants showed severe necrotic symptoms on the leaves and stems. Amino acid sequence data of the nucleocapsid protein genes of the three isolates (CbCh07A, TcCh07A, and GnCh07S) showed high identities with those of two other CSNV isolates, HiCh06A L1 from Japan and Chry1 from Brazil. Furthermore, for the first time the complete nucleotide sequence of the S RNA was determined for CSNV (isolate HiCh06A). In phylogenetic analysis based on the non-structural protein genes from the genus Tospovirus, HiCh06A L1 was placed in the same genetic group as Tomato spotted wilt virus (TSWV) and Impatiens necrotic spot virus. Host range examination for isolates HiCh06A L1 and CbCh07A showed that green pepper (cv. ‘Kyoyutaka’, ‘Saitamawase’, ‘Tosakatsura’, ‘L3 sarara’ and ‘L3 miogi’) and tomato (cv. ‘Sekaiichitomato’) were systemically susceptible hosts, whereas TSWV-resistant Solanaceae species, Capsicum chinense, Lycopersicon peruvianum and a TSWV-resistant cultivar of green pepper (cv. TSR miogi), were resistant.     

施氮量对盐角草生长及钠离子累积的影响

为了研究施氮对盐角草生长及其钠离子累积的影响,本研究通过5个氮肥水平大田小区试验分析了不同施氮量对盐角草生长和钠离子累积的影响.结果表明:施氮能够显著增加盐角草茎秆、籽粒和同化枝的产量;在0 ～ 600 kg/hm2范围内,盐角草的生物量及籽粒产量随着施氮量增加而呈现直线增长的趋势.施氮对盐角草茎秆、籽粒和同化枝中的Na+含量无显著影响,但盐角草同化枝中的Na+含量显著高于茎秆和籽粒.施氮能够促进盐角草各部分对Na+的累积,600 kg/hm2的施氮量条件下,盐角草的Na+累积量平均达到了9668 kg/hm2,较不施氮的2045 kg/hm2增加了370％.因此,本研究表明,施氮能够促进盐角草对盐渍土的改良效果.     

Toxic culture filtrates produced byCalonectria ilicicola, causal agent of red crown rot of soybean

Eleven soybean cultivars with different levels of susceptibility to virulent isolate SG915 ofCalonectria ilicicola were examined for reaction to metabolites produced by the isolate. When the culture filtrate from isolate SG915 was applied to trifoliates from 11 cultivars, cvs. ‘Cajun’ and ‘Asgrow 7986’ exhibited reduced wilting severity. However, there was no correlation between sensitivity to culture filtrate and susceptibility to the fungal isolate. Wilting severity on cv. ‘Riverside 699’ was greatest when trifoliates were treated with culture filtrates from isolates SG915 (highly virulent) and C31 (less virulent). The dilution end-point for culture filtrates of virulent isolate SG915 was determined to be 1:8. Nonautoclaved culture filtrates caused complete wilt of soybean trifoliates after 36 h, but autoclaved culture filtrates demonstrated a reduced ability to wilt leaves. Electrolyte leakage from treated leaf tissues increased over time regardless of the concentrations of culture filtrate tested. The greatest electrolyte losses were observed during the initial 30 min incubation of leaf tissues. The highest concentration of culture filtrate (50%, v/v) induced more electrolyte loss than the low concentration (10%, v/v) or control. These results suggest that toxic metabolites ofC. ilicicola may be involved in disease development with leaf symptom expression.     

‘<Emphasis Type="Italic">Candidatus</Emphasis> Phlomobacter fragariae’ and the proteobacterium associated with the low sugar content syndrome of sugar beet are related to bacteria of the arsenophonus clade detected in hemipteran insects

The phylogeny of ‘Candidatus Phlomobacter fragariae’(Ca. P. fragariae), the agent of the strawberry marginal chlorosis (SMC), and the proteobacterium associated with the low sugar content syndrome of sugar beet (SBRp) is not well understood. The spoT-spoU-recG genetic locus initially characterised by genome walking from a ‘Ca. P. fragariae’ partial spoT sequence was used to determine relatedness of ‘Ca. P. fragariae’ and SBRp with bacteria detected in hemipteran insects. Both plant pathogenic bacteria belong to the same phylogenetic group as bacteria of the arsenophonus clade detected in hemipteran insects. The SBRp is closely related to arsenophonus-like proteobacteria from cixiids and more distantly related to psyllid and delphacid secondary endosymbionts, whereas the relatives of ‘Ca. P. fragariae’ remain to be discovered. No genetic variability was found among isolates of ‘Ca. P. fragariae’ or SBRp. Implications for explaining the emergence of both ‘Ca. P. fragariae’ and SBRp as epidemic plant pathogens are discussed.     

Genetic and pathogenic characterization of <Emphasis Type="Italic">Verticillium dahliae</Emphasis> isolates from eggplant in Turkey

During 2005 to 2007, eggplant fields in 19 provinces from three different regions (western, southern and southeastern Anatolia regions) of Turkey were surveyed for Verticillium wilt. Sixty-seven isolates of Verticillium dahliae from wilted eggplants were collected and used for vegetative compatibility analysis using nitrate non-utilizing mutants and reference tester strains of vegetative compatibility groups (VCGs) 1A, 2A, 2B, 3, 4A and 4B. Among all isolates, 33 (12 from western, 15 from southern and six from southeastern Anatolia) were assigned to VCG2B, 23 (four from western, eight from southern and 11 from southeastern Anatolia) to VCG2A, six (four from southern, one from western, and one from southeastern Anatolia) to VCG4B and five (one from western, one from southern and three from southeastern Anatolia) to VCG1A, whereas VCG3 and VCG4A were not defined among isolates. In order to test if there is a correlation between VCG and pathogenicity in V. dahliae, pathogenicity of 30 isolates, representing the four multimember VCGs, were tested on Solanum melongena cvs. ‘Kemer’ and ‘Aydın Siyahı’ in an unheated greenhouse. All isolates were found to be pathogenic on both cultivars and there was no difference in susceptibility between the two cultivars. VCG4B isolates collectively led to higher vascular discoloration index (VDI) on both cultivars and higher disease severity index (DSI) on ‘Kemer’ compared with other VCGs. Similarly, VCG1A caused lower VDI on both cultivars and lower DSI on ‘Kemer’. Isolates within each of VCGs 1A, 2A and 4B caused similar VDI on both cultivars. Isolates of VCG2B were found to vary in their VDI values on both cultivars. To the best of our knowledge, the present study is the first report of natural infections of eggplant by VCG1A.     

Molecular characterization of a new isolate of phytoplasma associated with malformation and twisting of floral spikes of <Emphasis Type="Italic">Gladiolus</Emphasis> in India

In 2007–2009, severe virescence, malformation and twisting of flower spikes and yellowing of entire plants were observed in various Gladiolus cultivars growing in the gardens of the National Botanical Research Institute, Lucknow, India. The disease symptoms were very similar to symptoms in Gladiolus caused by the Aster yellows phytoplasma identified from Poland. Disease incidence was low (1.1–3.4%), but the severity of symptoms was high. A phytoplasma infection was detected in nine of 13 cultivars by PCR followed by nested PCR using universal phytoplasma primers P1/P6 or R16F2n/R16R2, respectively. An amplicon of ~1.2 kb obtained from the nested PCR was cloned and sequenced. Sequence analysis of the PCR amplicon revealed high (94–98%) identities and the closest phylogenic relationships with several isolates of Aster yellows phytoplasma of ‘Candidatus Phytoplasma asteris’ (16SrI group). Thus, the phytoplasma isolate of Gladiolus was identified as a new isolate of ‘Ca. P. asteris’ (16SrI group). In silico analysis of the phytoplasma isolate clearly indicated that the isolate was distinct from other Indian isolates of this phytoplasma.     

沃尔巴克氏体感染对黑腹果蝇头部转录组的影响

为明确沃尔巴克氏体Wolbachia对果蝇神经行为影响的分子机制,采取转录组测序技术对感染沃尔巴克氏体和未感染的黑腹果蝇Drosophila melanogaster头部样本进行转录组测序、组装、注释,筛选感染沃尔巴克氏体wMel和未感染黑腹果蝇头部转录组间的差异表达基因,并选择差异表达基因中差异倍数较大或与神经行为相关的基因进行qPCR验证。结果表明,感染沃尔巴克氏体wMel和未感染黑腹果蝇头部差异表达基因有679个（差异倍数≥2,P<0.05）,其中,由于感染沃尔巴克氏体wMel而上调表达的基因有566个,下调表达的基因有113个。GO功能注释分析显示,差异表达基因与代谢过程、催化和结合功能相关。KEGG通路注释分析发现,差异表达基因主要富集在蛋白消化与吸收、内分泌、神经活性配体-受体互作以及激素合成等通路中。从差异表达基因中筛选出11个基因进行qPCR验证,有9个基因的表达趋势与RNA测序结果一致。表明沃尔巴克氏体可广泛影响果蝇头部基因的表达水平,暗示可能由此影响宿主的神经行为。     

东亚飞蝗FK506结合蛋白基因克隆及其免疫功能分析

为明确东亚飞蝗Locusta migratoria manilensis免疫相关FK506结合蛋白(FK506 binding protein,FKBP)的功能,了解FKBP对金龟子绿僵菌Metarhizium anisopliae侵染东亚飞蝗的影响,分离克隆获得FKBP46基因及其纯化蛋白,采用荧光定量PCR方法测定...     

Genetic variability and population structure of <Emphasis Type="Italic">Grapevine virus A</Emphasis> coat protein gene from naturally infected Italian vines

Grapevine virus A (GVA) is considered one of the viruses associated with rugose wood (RW), one of the most economically important diseases of grapevine. Thirty-seven GVA isolates collected from grapevine cultivars from Marche (central-eastern Italy), Apulia and Campania (southern Italy), were subjected to molecular characterization. The genetic and population diversity was studied in the coat protein (CP) gene by RT-PCR-RFLP analysis with three restriction enzymes (MseI, AluI, and AciI), and nucleotide sequencing. A new primer pair (CP1F/R) allowing amplification of the whole CP gene (621 bp) was developed. RFLP with AciI yielded the highest number of variants in GVA isolates, showing seven different ‘simple’ profiles (A, B, C, D, E, F, and G). ‘Complex’ profiles were also found, and the most common variant combination was A + B in 39% of isolates. The analysis of GVA sequences confirmed the presence of plants infected with more than one GVA variant and suggested that RT-PCR-RFLP is suitable for evaluating population diversity of GVA enabling a screening of different haplotypes. The distribution of RFLP profiles and the phylogenetic analysis were not correlated with the location of infected plants, showing the presence of a GVA population with genetic diversity in the average with those of RNA viruses.     

Cropping systems for the management of phytonematodes

Damage caused by nematodes is one of the limiting factors in crop production. Traditional nematode management is based on the use of crop rotations, resistant cultivars, nematicides, or combinations of these methods. For a crop like peanut (Arachis hypogaea), cultivars resistant to root-knot nematodes are not available. There are soybean (Glycine max) cultivars resistant to some of the species of root-knot nematodes (Meloidogyne spp.); however, most fields have nematode infestations composed of mixtures of species. Research at Auburn has shown that tropical crops can be used effectively in rotation to manage nematode problems. Rotations with American jointvetch (Aeschynomene americana), castor (Ricinus communis), hairy indigo (Indigofera hirsuta), partridge pea (Cassia fasciculata), sesame (Sesamum indicum), and velvetbean (Mucuna deeringiana) have resulted in good nematode control and increased yields of peanut and soybean. Some crops (castor, sesame) are considered ‘active’ in that they produce compounds that are nematicidal, whereas others (e.g. corn, sorghum) are simply non-host, that is, ‘passive’.     

Detection of ‘<Emphasis Type="Italic">Candidatus</Emphasis> Phytoplasma brasiliense’ in a new geographic region and existence of two genetically distinct populations’

‘Candidatus Phytoplasma brasiliense’, a phytoplasma taxon associated with hibiscus witches’ broom disease was first described in 2001 in Brazil. In September 2007, a peach tree (Prunus persica) displaying yellowing symptoms reminiscent of phytoplasma infection was sampled in Guba region of Azerbaijan. A phytoplasma was detected in the diseased peach tree by nested PCR amplification of its 16S rDNA with universal primers for phytoplasmas. Phylogenetical analyses of the amplified 16S rDNA showed that the phytoplasma infecting the peach tree corresponded to ‘Ca. P. brasiliense’, a species never reported in Euro-Mediterranean area. To set up a detection assay, cloning of a ‘Ca. P. brasiliense’ DNA fragment was undertaken by comparative RAPD. The amplified dnaK-dnaJ genetic locus was used to design a nested PCR assay able to amplify all ‘Ca. P. brasiliense’ isolates of the subgroup 16SrXV-A without amplifying the related members of the group 16SrII. This assay also allowed confirming the first detection of ‘Ca. P. brasiliense’ in diseased basil collected in south Lebanon.     

A during-infection spray strategy using sulphur compounds,copper, silicon and a new formulation of potassium bicarbonate for primary scab control in organic apple production

In a field experiment conducted over two growing seasons, the effectiveness and phytotoxicity of inorganic fungicides such as sulphur, lime sulphur, copper, silicon and Armicarb (a new formulation of potassium bicarbonate) was compared with water for the control of primary apple scab infections in Belgium on high, medium and low scab-susceptible cultivars (cvs ‘Pinova’, ‘Pirouette’ and ‘Reinette des Capucins’, respectively). In order to drastically reduce the amount of fungicide applied in the orchard, two approaches were used: (1) a strategy involving spraying during the infection process, before fungal penetration and (2) a tunnel sprayer machine for treatment applications. Under field conditions highly favourable for disease, low rates of elemental sulphur (31.8 and 38.6 kg ha⁻¹ year⁻¹ in 2005 and 2006, respectively) combined with low rates of copper (2.1 kg ha⁻¹ year⁻¹ in both years) provided the best scab control and reduced scab severity on the fruits of cv. ‘Pinova’ by 97 and 98% compared with water control in 2005 and 2006, respectively. Lime sulphur was much more effective than wettable sulphur and appeared to be efficient at temperatures below 10°C, but its effectiveness against apple scab decreased if the treatments were applied 12–24 h later than in the ‘during-infection’ spray strategy. Armicarb used alone significantly reduced apple scab severity on the leaves and fruits of the three cultivars compared with the water control. Its effectiveness was as good as wettable sulphur applied using the same timing and dosage. Silicon reduced apple scab on fruits very slightly, but not on leaves. The amounts of wettable sulphur, lime sulphur, copper, silicon and potassium bicarbonate used in this experiment to control apple scab were not phytotoxic, did not increase fruit russet, did increase the yield of each cultivar and did not affect summer density of the beneficial Typhlodromus pyri. The potential and limitations of ‘during-infection’ spraying as a protection strategy against apple scab in organic farming are discussed.