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1.
Twenty natural populations of F. cymosum, an insect-pollinated allogamous wild species of Fagopyrum, were investigated for their chromosome number and allozyme variation at 10 Ioci encoding 8 enzymes. Diploid populations were obtained in Sichuan, Yunnan and Tibet in China, whereas tetraploid populations were obtained in Tibet, the Himalayan hills, Thailand and southern China. Both diploid and tetraploid populations maintained a large amount of allozyme variation. The average heterozygosity, He, ranged from 0.045 to 0.389 (0.213 on average). Tetraploid populations showed higher He values than diploid populations. Natural populations of F. cymosum were locally well differentiated (GST = 0.322), probably due to reproductive isolation between the two ploidy levels and to distribution over wide areas from southern China to the Himalayan hills. The phylogenetic tree constructed by the neighbor-joining method based on allozyme variation clarified two distinct groups of diploid populations, the Sichuan and Yunnan groups. As for the tetraploid populations, polyploidization occurred twice independently, once in Yunnan and once in eastern Tibet. Tetraploid F. cymosum diffused to warmer areas such as southern Yunnan and Thailand as well as to cooler areas of Tibet and the high Himalayan hills and became the most widely distributed of the Fagopyrum species.  相似文献   

2.
To study the magnitude and nature of genetic variation in E. fibrosus, the levels and distribution of allozyme and RAPD variations were investigated in populations collected from Finland and Russia. The results obtained from the allozyme and RAPD studies were compared to each other in 10 of the populations. The allozyme analysis showed that 6 of 12 presumed loci (50%) were polymorphic within the species, while the mean number of polymorphic loci within populations was 4.8%. The mean number of allele per locus for the species was 1.5 and 1.05 across the populations. Genetic diversity at the species level was low (H es = 0.025), and the mean population genetic diversity was even lower (H ep = 0.007). Both these values were much lower than the average for other Elymus and self-fertilising species. The largest proportion of the total allozyme diversity was found among, rather than within the populations (G ST = 0.70). The allozyme genetic distances between the populations did not reflect geographic distances. Cluster and principal coordinates analyses revealed the same allozyme relationship patterns among the populations. A comparison of allozyme and RAPD variation in 10 of the populations showed differences in the amount of genetic variation. The RAPD analysis revealed higher levels of variation (A p = 1.19, P p = 20.3 and H ep = 0.09) than the allozyme one) A p = 1.06, P p = 5.8 and H ep = 0.008). For both markers, the largest proportion of the total gene diversity was found among the populations studied (G st = 0.63 for RAPDs and G st = 0.65 for allozyme). In contrast to the allozyme analysis, the RAPD based genetic distances did reflect geographic distances. The cluster and principal coordinates analyses showed different grouping of populations for each data set. There was a positive, but not significant, correlation (r = 0.41) between the genetic distance matrices resulting from these markers. Regional comparison revealed that the Finnish populations had a higher diversity than the Russian ones. Generally, this study indicates that E. fibrosus contains low genetic variation in its populations. The results are discussed in the context of conservation of the species.  相似文献   

3.
The objectives of this study were to determine the patterns of variability and to compare genetic distance between seed morphometric and allozyme data of neem (Azadirachta indica). Phenotypic variation from open pollinated seed materials at 12 isozyme loci was examined using starch gel electrophoresis for four populations from Thailand, Bangladesh and Kenya. All four populations exhibited high levels of variation for seed parameters and isozymes. UPGMA cluster analysis of Nei's genetic distance when based on isozymes revealed two genetic groups. The population from Kenya showed a close genetic relationship with the Bangladeshi populations. The population from Thailand exhibited a distant relationship with the other three populations. This result suggests that the Kenyan population was introduced from the Indian subcontinent. In contrast, cluster analysis of seed morphometric data indicated three different groups of populations. The population from Kenya showed a distant relationship with all other populations. The study demonstrates that allozyme data may not correspond with morphometric traits when measuring genetic distance. It is suggested that this controversy may depend on environmental influence on morphometric traits, possibly also on the enzyme patterns.  相似文献   

4.
The allozyme variation of 15 Tunisian wild populations of Mentha pulegium L. threatened by human activities (clearing, hard-grazing, ploughing, traditional uses) was surveyed by the analysis of 14 isozyme loci using horizontal gel starch electrophoresis. The species exhibited a high level of genetic variation within populations (the mean Ap = 2.20, P = 72%, Ho = 0.349 and He = 0.229), which indicates a predominately outcrossing mating system and the recruitment of new genotypes via dispersal seeds. The genetic structure analysis of the populations using F statistics indicates no inbreeding, and showed an excess of heterozygosity for few loci. The moderate differentiation of populations (FST = 0.110) and the low rate of gene flow between them (Nm = 2.02) might been caused by recent isolation of the populations through biotope disturbances. The value of Nei's genetic identity varied from 0.839 to 0.999 reflecting a relatively low genetic divergence between populations. Cluster analysis using UPGMA method and Nei's genetic identity values, showed that populations geographically close didn't always cluster together. However, populations within the same bioclimatic stage generally subclustered together indicating that differentiation between bioclimatic regions occurred.  相似文献   

5.
Trillium camschatcense, a long-lived common woodland herb, has been experiencing intensive habitat fragmentation over the last century in eastern Hokkaido, Japan. We examined the genetic diversity and population genetic structure of 12 fragmented populations with different population sizes using allozyme electrophoresis. The percentage of polymorphic loci and mean number of alleles per locus were positively related to population size, probably due to the stochastic loss of rare alleles (frequency of q<0.1) in small populations. Populations with 350 flowering plants or fewer had lost almost all of their rare alleles. While the heterozygosity and inbreeding coefficient were not related to population size, some small populations showed relatively high inbreeding coefficients. In spite of the low genetic differentiation among overall populations (FST=0.130), local population structuring was recognized between the two geographically discontinuous population groups. Within groups, sufficient historical gene flow was inferred, whereas a low dispersal ability of this species and geographical separation could produce apparent differentiation between groups.  相似文献   

6.
Caragana korshinskyi Kom. is a long-lived shrub species indigenous to northwestern China, and important in vegetation rehabilitation of widely degraded and degrading semiarid and arid regions because of its high ecological and economic values. Information at molecular level on its genetic diversity, however, is not available. Accordingly, the extent and distribution for genetic diversity and population structure in 11 populations of C. korshinskyi were assessed using polyacrylamide gel electrophoresis for seven enzymes including aminopeptidase, aspartate aminotransferase, glucose-6-phosphate dehydrogenase, malate dehydrogenase, phosphoglucoisomerase, phosphogluconate dehydrogenase, and peroxidase. The seven-enzyme systems produced 11 loci encompassing 19 alleles demonstrating high genetic variation at both species and population levels. A considerable excess of heterozygotes relative to Hardy–Weinberg expectations was detected at the both levels as well. GST ranged from 0.0074 for AMP-1 to 0.4646 for PGD with a mean of 0.1517, indicating that approximately 84.8% of the total allozyme variation occurred within populations. An indirect estimate of the number of migrants per generation indicated that gene flow was high among populations of the species.  相似文献   

7.
Summary A sample of 60 natural populations of perennial ryegrass from France has been studied for allelic variation at 7 polymorphic enzyme loci. Population genetic statistics are of the same magnitude than those previously reported for other outbreeding, short-lived perennial species (P = 64%, A = 2.75, H = 0.270).Genotype frequencies at most collection sites do not deviate significantly from Hardy-Weinberg expectations, with however a slight deficit of heterozygotes which may be accounted for by a Wahlund effect. Gene diversity is mainly explained by the within population component. The between population differentiation Fst averaged on 4 loci is only 0.054, which accounts for only 6% of the whole diversity.When mapped, most allele frequencies do not show any special structure. Only five alleles present a clinal trend from North to South. These 5 alleles are probably related to some climatic factors such as average temperature or potential evapotranspiration. The causal hypotheses about the low level of between-population differentiation and spatial structure are discussed with reference to the literature.The consequences of the found population structure for sampling and conservation strategies of natural populations for genetic resources are presented and discussed.  相似文献   

8.
Genetic consequences of silvicultural management of Leucaena esculenta subsp. esculenta were analyzed from eight allozyme loci in half-sib families of one wild and one managed in situ (selectively cleared) population from La Montaña de Guerrero region, Central Mexico. A reference sample (including wild, feral and cultivated individual plants) from the states of Morelos, Puebla and Guerrero, Mexico was also analyzed. Genetic variation, population structure and mating system were analyzed. All loci showed high variation (75–87.5% polymorphic loci at 95% level; 2.4–2.8 mean number of alleles per locus). All progenies showed heterozygous deficiency, but both wild and managed parental inbreeding coefficients were negative, suggesting heterosis. Progenies of managed populations differed from those of the wild and reference samples (Nei’s unbiased identities 0.874–0.934). Biparental inbreeding is suggested by Wright’s-statistics ( f = 0.313), and by outcrossing rate estimates: tm = 0.644 (SE 0.094), and 0.645 (SE 0.193); ts = 0.576 (SE 0.189), and 0.523 (SE 0.182), for managed and wild samples respectively. Population differentiation is significant (Θ = 0.210). The species is self-incompatible and deviations from the mixed mating model were found. Indirect estimates of products of effective population size (Ne) by the proportion of migrants (Nm) were moderate, as were the N evalues. Variation due to ecotypic differentiation (related to altitude), prolonged artificial selection, and introduction from other areas is supported. A model of domestication of seed-propagated trees is suggested, based on extensive and in situ selection of locally adapted populations, and their diffusion to other areas.  相似文献   

9.
Genetic variation and its distribution within and among 23 populations of Triticum urartu collected from Syria, Lebanon, Turkey, Armenia, and Iran was estimated using isozyme markers at eight polymorphic loci. The number of alleles per locus (A= 1.21), percentage polymorphic loci (P= 20.1%), and mean gene diversity (He= 0.024) were relatively low. In a population from Lebanon, a high number of alleles per locus (A= 2.13) and percentage polymorphic loci (P= 87.5%) was found. On average, genetic variation among populations (GST= 0.407) was smaller than within-population variation (0.593). However, different patterns of genetic structure were found among various geographic regions. Interpopulation variation was highest for the Iranian populations (0.89) followed by the Turkish populations (0.66). A reverse pattern was observed for the Syrian (0.11) and for the Lebanese (0.13) populations. The Armenian populations exhibited similar interpopulation and within-population variation. Principal component and cluster analyses resulted in distinct grouping of the geographically proximal populations, with the exception of the two Iranian populations. The Turkish populations were different from the neighboring Armenian populations compared to other countries. The populations from southern Syria and those from Lebanon also exhibited a high degree of genetic diversity. The two most heterozygous loci, Mdh-2 and Pgi-2, separated the populations along the first and second principal components, respectively. Most of the rare alleles were scattered sporadically throughout the geographic regions. Rare alleles with high frequencies were found in the Turkish and Armenian populations. These results indicated that different geographic regions require specific sampling procedures in order to capture the range of genetic variation observed in T. urartu populations.  相似文献   

10.
Naturally occurring populations of wild Brassica oleracea were collected in Spain, France, and Great Britain. Allele frequencies at four isozyme loci were determined for 18 populations, while five populations were screened using five random primers to generate RAPDs. Levels of homozygosity and gene diversity, H, were computed for each population using isozyme data and RAPD data when applicable. Homozygosity levels tended to be higher in smaller populations, which could also be observed as increased numbers of homozygous loci in smaller populations. Gene diversity values based on isozymes indicated considerable within population variation regardless of population size. The RAPID based gene diversities were significantly higher and the two exceptional populations displayed diversity levels more in keeping with the rest. The coefficient of gene differentiation, G ST , for populations in each region showed that the Spanish populations were more homogenous than the French or British. When the G ST for all populations was calculated using isozymes vs. RAPD data, the RAPD data gave a significantly lower value, a plausible result of the higher within population variation detected using RAPDs. Genetic distances between populations from different regions were also calculated from both data sets and used to produce phenograms. Clustering according to geographic region was not evident using either isozyme or RAPD data.  相似文献   

11.
In the UK, Euphydryas aurinia exists in fragmented habitat patches, and undergoes population fluctuations as a result of a larval parasitoid. Its range is declining in the UK and conservation is thought to require a landscape approach since populations spread over large areas in some years and contract to core breeding patches in others. We examined populations at a range of geographic scales using allozyme electrophoresis to look for evidence of gene flow and differences in genetic diversity among populations. Nationally, our FST value was 0.1542 but between population groups within the suspected colonisation range of the butterfly (ca. 20 km), FST values were not significantly different from zero. Genetic diversity in terms of number of alleles and heterozygosity was reasonably high in natural populations (He=0.267) but low in an introduced, isolated population. We infer that migration between closely spaced subpopulations (in a metapopulation) maintains a high genetic effective population size (large number of individuals in a population that contribute genes to the next generation) which offsets any local reductions in population numbers due to stochastic extinctions or parasitoid effects. We therefore conclude that effective conservation of the species must seek to provide networks of suitable habitat for groups of subpopulations, rather than maintaining habitat for isolated populations.  相似文献   

12.
In six mature, environmentally stressed sugar maple (Acer saccharum) populations totalling 350 trees, genetic structures were studied within stands. Genetic variation was electrophoretically analyzed for 12 enzyme systems. The populations revealed Hardy-Weinberg proportions for all 11 polymorphic loci. Observed and conditional heterozygosity were. 141 and 899, respectively. Analysis of fixation indices indicated a slight heterozygote deficiency compared to panmictic conditions. Population differentiation was weak (F ST =.017). Between healthy and declining subpopulations no significant differences were detected in terms of allozyme variation. However in healthy trees, conditional heterozygosity (H c) and relative genotypic multiplicity (M rel) were higher in five out of six populations.  相似文献   

13.
Natural populations of wild rice, Oryza rufipogon Griff., are now threatened with the disturbance of their natural habitats by various human activities. To obtain basic information on genetic erosion or loss of genetic diversity in wild rice, we investigated how environmental changes of habitat affected the genetic structure of its natural population at a study site in the central plain of Thailand. During 10 years from 1985 to 1994, the wild-rice population at this site was seriously destroyed and fragmented. Using two sets of seed sample collected in 1985 and 1994 from the same population, allozyme variability at 17 loci of 11 enzymes were examined. Isozyme genotypes of mother plants of seed samples were estimated by the segregation in each progeny, and we calculated genetic parameters for the population. Gene diversity severely decreased in the 1994 sample compared with the 1985 sample. It is supposed that declining and fragmentation of the wild rice population, which happened during the 10 years, caused loss of genetic variability and forced the habitually outbreeding plants to inbreed, accelerating a reduction in gene variability. Pgi1-1 allele which was common in Indica rice cultivars of this region was found in the wild rice plants growing at the side of rice fields. Probably, introgression has occurred between wild and cultivated rice plants, and consequently the intrinsic nature of wild rice was gradually blurred by cultivar genes. We must realize that the genetic erosion of wild rice is rapidly proceeding and that an action for their conservation in natural environment, so called in situ conservation, is urgently needed.  相似文献   

14.
Loss of genetic variation through genetic drift can reduce population viability. However, relatively little is known about loss of variation caused by the combination of fluctuating population size and variance in reproductive success in age structured populations. We built an individual-based computer simulation model to examine how actual culling and hunting strategies influence the effective population size (Ne) and allelic diversity in Yellowstone bison over 200 years (~28 generations). The Ne for simulated populations ranged from 746 in stable populations of size 2000 up to 1165 in fluctuating populations whose census size fluctuates between 3000 and 3500 individuals. Simulations suggested that ~93% of allelic diversity, for loci with five alleles will be maintained over 200 years if the population census size remains well above ~2000 bison (and if variance in male reproductive success is high). However for loci with 20 alleles, only 83% of allelic diversity will be maintained over 200 years. Removal of only juveniles (calves and yearlings) resulted in longer generation intervals which led to higher maintenance of allelic diversity (96%) after 200 years compared to the culling of adults (94%) when the mean census size was 3250 (for loci with five alleles). These simulations suggest that fluctuations in population census size do not necessarily accelerate the loss of genetic variation, at least for the relatively large census size and growing populations such as in Yellowstone bison. They also suggest that the conservation of high allelic diversity (>95%) at loci with many alleles (e.g., ?5) will require maintenance of a populations size greater than approximately 3250 and removal of mainly or only juveniles.  相似文献   

15.
We examined variation at four isozyme and seven microsatellite loci in natural populations of Brassica oleracea L. on the coast of Dorset. All loci were polymorphic, and the diversity index of isozyme loci was similar to that of the microsatellites. Both microsatellites and isozymes showed significant spatial differentiation of genetic variation, but the scale differed between the marker types. Significant non-random mating at isozyme loci was detected within small groups of about five plants, in which adjacent individuals were separated by less than 5 m. On the other hand, non-random mating at microsatellite loci was only detected within the Dorset region as a whole. FST was significant for all loci and there was evidence of isolation by distance at both microsatellite and isozyme loci. From these data we infer that there is low but significant amounts of gene flow among B. oleracea populations in Dorset. The differences in the genetic structure between the two types of marker may be due to higher mutation rates at the microsatellite loci; however, the data suggest that stepwise gain or loss of single repeat units is not the principal mechanism.  相似文献   

16.
Summary This study gives the results of allozyme diversity within and among 20 wild Lima bean populations uniformly distributed throughout the Central Valley of Costa Rica. The electrophoretic analysis of seven enzyme systems show five monomorphic loci and a relatively low level of polymorphism for the other loci. This moderate level of polymorphism is unexpected for a species for which a fair amount of allogamy rates has been reported, at least among the cultivated forms. The genetic parameters (mainly percentage of polymorphic loci, mean genetic diversity, percentage of heterozygotes and fixation index) indicate a tendency for a predominantly selfing breeding system in the wild Lima beans although some values range between selfing and mixed-animal breeding systems. Very low within-population diversity is observed while a good diversity is found among populations. Results also show a departure from Hardy-Weinberg equilibrium on most analyzed populations in the target site This might be due to populations divided into subpopulations among which no natural crosses occur randomly, to weeding practices or to overlap of generations within some populations. All the results obtained in this work are discussed in view of further studies for the planning of in situ conservation in a quickly evolving tropical environment.  相似文献   

17.
Species specific levels of genetic diversity are necessary for the viability of populations. Erebia epiphron (Lepidoptera: Satyrinae) is a relic species in the Sudetan Mountains, Czech Republic. These populations represent a suitable study object to test the population genetic effects of large, small and introduced populations by means of allozyme electrophoresis. A large continuous and viable population (>100,000 individuals) shows a significantly higher genetic diversity than a small isolated and declining population (ca. 5000 individuals), which most probably was founded during the Little Ice Age in the 17th and 18th centuries and became isolated afterwards. In 1932 and 1933, 50 females were transferred from the large population to the Krkonose Mountains, where they established a viable and quickly expanding population. The number of transferred individuals was sufficient to transfer most of the allozyme diversity of the large natural population. Due to the higher elevation of the Krkonose in comparison to the native range, this allocation might safeguard the survival of the Czech race of E. epiphron even under conditions of global warming.  相似文献   

18.
The last two centuries witnessed the human-caused fragmentation of Tunisian Ceratonia siliqua L. (Caesalpinoideae) populations which were often represented by scattered individuals. Seventeen populations growing in four bioclimatic zones: sub-humid, upper semi-arid, mean semi-arid and lower semi-arid zones, were sampled for allozyme diversity to assess their genetic diversity and structuration using eight isozymes revealed by starch gel electrophoresis. The species showed high diversity within populations. The average number of alleles per polymorphic locus was 1.98, the percentage of polymorphic loci was 83.4% and the mean observed heterozygosity (Ho) and expected heterozygosity (He) under Hardy–Weinberg equilibrium were respectively 0.247 and 0.316. A substantial level of inbreeding within populations induced by Wahlund effect, was observed (FIS = 0.231). High diversity resulted from the great number of genotypes in the ancestral population before fragmentation, favoured by the outbreeding of the species. High differentiation and low gene flow were detected among populations (FST = 0.200) and among pairs of ecological zones (0.113< FST <0.198). However, the differentiation coefficient of the four zones was low (FST = 0.085) and similar to the average FST for forest trees. Population structuration depends on geographic distance between sites rather than bioclimate, indicating that structuration has occurred slowly and that climatic conditions have had little effect. Nei's genetic distances (D) between populations were low and ranged from 0.004 to 0.201. Mean D value for all population was 0.087. The UPGMA clustering established for all populations through Nei's genetic distances did not clearly show that, for the majority of populations, grouping had resulted from ecological factors or geographic location. The substantial differentiation and the high genetic similarities between populations indicate that populations have been recently isolated as a result of anthropic pressure. In-situ conservation strategies must first focus on populations with a high level of genetic diversity and rare alleles. Appropriate conservation action should take account of bioclimatic zones. Ex-situ preservation should be based on a maximum number of individuals collected within populations in each ecological group and their propagation in different bioclimates by means of cuttings.  相似文献   

19.
Myrtus communis L. (Myrtaceae), in Tunisia, is closely associated with Quercus suber L. forest which stretched continuously from the North to parts of Cap Bon and Tunisian Dorsal. The destruction of the primary oak forests associated to an over-exploitation of Myrtus for its essential oil quality had led to discontinuous populations exhibiting various levels of degradation. Using starch gel electrophoresis, we analyzed the polymorphism of nine isozymes in order to assess genetic diversity and structuring of 17 natural populations prospected in the three geographical regions and coinciding with subhumid, humid inferior and semi-arid superior bioclimates. The analysis of the level and the distribution of the genetic diversity in this species might help in its conservation. Out of the 18 loci detected for all populations and isozymes analyzed, 12 loci were polymorphic. Allelic frequencies differed according to populations and particular alleles characterized ecological groups. A high level of genetic variation within populations was observed. The mean number of alleles per polymorphic locus was Ap = 1.67, the percentage of polymorphic loci was P = 60.3% and the observed (Ho) and the expected (He) heterozygosities were respectively 0.144 and 0.215. Populations belonging to subhumid (Cap Bon) and semi-arid superior (Tunisian Dorsal) climates, located in degraded sites exhibited the highest level of inbreeding (0.425 < FIS < 0.450). A high level of differentiation (FST = 0.396) and a low gene flow (Nm = 0.337) among populations, as a result of habitat intermediate destruction, were revealed. The differentiation of populations within the same bioclimate (or geographic) group was substantial and relatively higher for semi-arid superior populations (FST = 0.262), which were more distant. The three ecological groups exhibited a high level of structuring (FST = 0.401). These differentiations might be due to geographic distances and to the variations of ecological factors between sites, including human activities and environmental factors. Nei’s (1972) genetic distances calculated between pairs of populations were globally low (0.006 < D < 0.367) with a mean of 0.15. They indicate a high level of similarity between populations. UPGMA clustering, established through Nei’s genetic distances, showed three population aggregates according to their geographic/bioclimatic appartenances. The high differentiation between populations and the low level of their genetic divergence indicated their recent isolation under anthropic pressures. The species conservation (in situ or ex situ) strategies should take into account the genetic diversity level within populations and its variation between geographic groups.  相似文献   

20.
Understanding population differentiation and genetic diversity within population is critical to the development of conservation programmes for threatened species. The protected species, Anchusa crispa Viv. occurs on coastal sand dunes in three disjunct geographical groups of populations: two populations on the east coast of Corsica, several populations around a single estuary on the west coast of Corsica and at a number of sites in north-west Sardinia, where two different subspecies occur. In this study we quantify differentiation of reproductive traits and isozymes among regions and populations on Corsica and between subspecies on Sardinia. No isozyme variation was detected within any of the studied populations nor among populations from a given geographic region. Two loci showed geographic differentiation between regions on Corsica. On Sardinia, the two subspecies showed no isozyme differentiation, and, depending on the loci examined, are similar to one or other of the two regions on Corsica. Reproductive traits show significant differentiation between geographic regions on Corsica, but little variation among populations within a region. In populations on the west coast of Corsica, flowers are small and have a stigma situated at the same level as the apex of the anthers whereas on the east coast, flowers are larger and have the stigma below the anthers. On Sardinia, A. crispa subsp. crispa has a floral morphology similar to the Corsican plants, whereas subspecies maritima has larger flowers with the stigma positioned above the anthers (approach-herkogamy). Quantitative variation in floral morphology thus agrees with the separation of two taxonomic entities on Sardinia and geographic variation in reproductive traits and isozymes has important ramifications for the sampling of populations for conservation programmes.  相似文献   

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