PCR as a diagnostic tool for brucellosis

Numerous PCR-based assays have been developed for the identification of Brucella to improve diagnostic capabilities. Collectively, the repertoire of assays addresses several aspects of the diagnostic process. For some purposes, the simple identification of Brucella is adequate (e.g. diagnosis of human brucellosis or contamination of food products). In these cases, a genus-specific PCR assay is sufficient. Genus-specific assays tend to be simple, robust, and somewhat permissive of environmental influences. The main genetic targets utilized for these applications are the Brucella BCSP31 gene and the 16S–23S rRNA operon.

Other instances require identification of the Brucella species involved. For example, most government-sponsored brucellosis eradication programs include regulations that stipulate a species-specific response. For epidemiological trace back, strain-specific identification is helpful. Typically, differential PCR-based assays tend to be more complex and consequently more difficult to perform. Several strategies have been explored to differentiate among Brucella species and strains, including locus specific multiplexing (e.g. AMOS-PCR based on IS711), PCR-RFLP (e.g. the omp2 locus), arbitrary-primed PCR, and ERIC-PCR to name a few. This paper reviews some of the major advancements in molecular diagnostics for Brucella including the development of procedures designed for the direct analysis of a variety of clinical samples. While the progress to date is impressive, there is still room for improvement.     

奶牛布病与衣原体病混合感染的PCR诊断

本文采用PCR技术对发生在甘肃某奶源基地一奶牛场的群发性怀孕母牛流产进行病原检测,证明是此次流产由布鲁氏菌和衣原体混合感染所致.     

Improved sensitivity of PCR for Chlamydophila using pmp genes.

Primers targeting the conserved pmp gene family of Chlamydophila abortus were evaluated for their ability to improve the polymerase chain reaction (PCR) sensitivity. In purified DNA, specific pmp primers (named CpsiA and CpsiB) allowed at least a 10-fold increase of the PCR sensitivity compared to the specific ompA primers for C. abortus, but also for C. psittaci and C. caviae strains. No amplification was observed on C. felis, C. pecorum, C. pneumoniae and Chlamydia trachomatis strains. Tested on contaminated specimens such as genital swabs, the PCR sensitivity observed with CpsiA/CpsiB was also better than with the ompA primers. This study demonstrated that these specific pmp primers could serve as valuable, sensitive and common tools for a specific Chlamydophila diagnosis in ruminant, avian and human diseases. Digestion by AluI of the CpsiA/CpsiB fragments allowed a specific discrimination of the strains in function of their hosts and/or their serotypes.     

奶牛衣原体病PCR诊断方法的研究

牛衣原体病是由鹦鹉热衣原体感染牛引起的一种地方性的接触性传染病,以妊娠母牛流产、早产、死产或产无活力的犊牛为主要特征。该病还有称牛流行性流产、牛地方性流产、牛新立克次体性流产。牛衣原体病的诊断有病原学诊断,包括病原分离鉴定;血清学诊断包括补体结合(CF)试验、间     

Urinary PCR as an increasingly useful tool for an accurate diagnosis of leptospirosis in livestock

The aim of the present study was to consider the wide usage of urinary PCR as an increasingly useful tool for an accurate diagnosis of leptospirosis in livestock. A total of 512 adult animals (300 cattle, 138 horses, 59 goats and 15 pigs), from herds/flocks with reproductive problems in Rio de Janeiro, Brazil was studied by serology and urinary PCR. From the 512 serum samples tested, 223 (43.5 %) were seroreactive (cattle: 45.6 %, horses: 41.3 %, goats: 34%and pigs: 60 %). PCR detected leptospiral DNA in 32.4 % (cattle: 21.6 %, horses: 36.2 %, goats: 77.4 % and pigs: 33.3 %. To our knowledge there is no another study including such a large number of samples (512) from different species, providing a comprehensive analysis of the usage of PCR for detecting leptospiral carriers in livestock. Serological and molecular results were discrepant, regardless the titre, what was an expected outcome. Nevertheless, it is impossible to establish agreement between these tests, since the two methodologies are conducted on different samples (MAT - serum; PCR - urine). Additionally, the MAT is an indirect method and PCR is a direct one. In conclusion, we have demonstrated that urinary PCR should be considered and encouraged as an increasingly useful tool for an accurate diagnosis of leptospirosis in livestock.     

Real-time PCR as a surveillance tool for the detection of Trichinella infection in muscle samples from wildlife

Trichinella nematodes are the causative agent of trichinellosis, a meat-borne zoonosis acquired by consuming undercooked, infected meat. Although most human infections are sourced from the domestic environment, the majority of Trichinella parasites circulate in the natural environment in carnivorous and scavenging wildlife. Surveillance using reliable and accurate diagnostic tools to detect Trichinella parasites in wildlife hosts is necessary to evaluate the prevalence and risk of transmission from wildlife to humans. Real-time PCR assays have previously been developed for the detection of European Trichinella species in commercial pork and wild fox muscle samples. We have expanded on the use of real-time PCR in Trichinella detection by developing an improved extraction method and SYBR green assay that detects all known Trichinella species in muscle samples from a greater variety of wildlife. We simulated low-level Trichinella infections in wild pig, fox, saltwater crocodile, wild cat and a native Australian marsupial using Trichinella pseudospiralis or Trichinella papuae ethanol-fixed larvae. Trichinella-specific primers targeted a conserved region of the small subunit of the ribosomal RNA and were tested for specificity against host and other parasite genomic DNAs. The analytical sensitivity of the assay was at least 100 fg using pure genomic T. pseudospiralis DNA serially diluted in water. The diagnostic sensitivity of the assay was evaluated by spiking 10 g of each host muscle with T. pseudospiralis or T. papuae larvae at representative infections of 1.0, 0.5 and 0.1 larvae per gram, and shown to detect larvae at the lowest infection rate. A field sample evaluation on naturally infected muscle samples of wild pigs and Tasmanian devils showed complete agreement with the EU reference artificial digestion method (k-value=1.00). Positive amplification of mouse tissue experimentally infected with T. spiralis indicated the assay could also be used on encapsulated species in situ. This real-time PCR assay offers an alternative highly specific and sensitive diagnostic method for use in Trichinella wildlife surveillance and could be adapted to wildlife hosts of any region.     

Development of a differential multiplex PCR assay for equine herpesvirus 1 and 4 as a diagnostic tool

In this study, a multiplex polymerase chain reaction (PCR) procedure was developed for differentiation of strains and field isolates of equine herpesvirus type 1 (EHV-1) and type 4 (EHV-4). Specific oli-gonucleotide primers were combined to amplify the thymidine kinase (TK) gene region of EHV-1 and EHV-4, which would yield fragments of different lengths for each virus in the same amplification reaction. The specificity of the largest PCR amplicon for EHV-4 was confirmed by restriction digestion with HindIII. The multiplex PCR proved to be a fast and sensitive method for typing EHV-1 and EHV-4 isolates and for detection and differentiation of both viruses in field samples in which infectious virus is no longer available. The sensitivity was improved by combining cycling optimization and visualization of PCR products in ethidium bromide and silver-stained acrylamide gels.     

Evaluation of different laboratory methods for diagnosis of pig chlamydiosis in Lithuania

Pig chlamydiosis is antrophozoonosis caused by Chlamydophila abortus. Chlamydias (C type) are widely found in nature and can infect humans, domestic and wild mammals, and 139 types of birds. The peculiar feature of chlamydias is the tropism to different tissues, organs and organisms. In 2502 pig blood sera tests from Lithuanian farms, anti-chlamydia complement binding (CB) antibodies were detected in 192 cases (7.7%). Serological tests showed the following (C type) chlamydia bearing regions: 22.0% Mazeikiai district, 17.2%--Kaisiadorys district, 13.5%--Panevezys district, 12.3%--Vilkaviskis district. Rare incidence of the disease was found in Siauliai district 1,2% and Klaipeda district 2.5% farms. The highest antibody titers in blood serum tests were found in Joint Stock Company (JSC) "Krekenava" and "Vejine", i.e. 1:128 and 1:64, respectively. The following methods for the study of pig chlamydiosis were used and comparatively evaluated: complement binding reaction (CBR), direct immunofluorescence (DIF), imunoenzyme assay (IEA), indirect immunofluorescense (IIF), micro immunofluorescense (MIF), polymerase chain reaction (PCR) and cell culture (CC) test. PCR method was found to be more sensitive and reliable compared to imunoenzyme assay, but the latter is more economic especially for screaning. In pigs with the clinically expressed symptoms, 108 pigs infected with chlamydia were detected. CB assay revealed the infection rate from 3.4% to 7.9% in piglets, sows and boars. The highest level of chlamydia infection was detected in fatteners (17.6%). Seroepizootic study of pig chlamydiosis revealed the different infection rate in the animals investigated. The highest chlamydia infection risk is in winter (10.4%) and the lowest--in summer (2.8%).     

Nuclear survivin expression as a potentially useful tool for the diagnosis of canine cutaneous sebaceous lesions

Background – Sebaceous glands are specialized cutaneous adnexal glands, which work under constant hormonal control to produce sebum. They can give rise to several proliferative lesions, such as hamartoma, hyperplasia and neoplasms (adenoma, epithelioma and carcinoma). Their nomenclature is currently confusing, both in veterinary and in human medicine, owing to the difficulty of differentiating between some of these lesions. Methods – The present study used immunohistochemistry to determine the expression levels and patterns of survivin and Ki67 in five samples of normal canine skin and 44 cases of canine cutaneous lesions with sebaceous differentiation (10 hamartomas, nine hyperplasia, eight adenomas, eight epitheliomas and nine carcinomas). Results – In normal glands, survivin, as well as Ki67, was expressed in scattered reserve cells. In hamartomas, survivin was more highly expressed than in normal skin, indicating a possible role of this molecule in the pathogenesis of these congenital lesions. In tumours, a moderate or high level of survivin and Ki67 expression (more than two and four and more than two positive cells, respectively) were significantly correlated with a malignant histotype, infiltrative growth and a moderate or high number of mitoses (more than two). Conclusions and clinical importance – The level of survivin expression increased with increasing malignancy, designating survivin as a new diagnostic marker in the assessment of malignancy of sebaceous tumours.     

A modified protocol for sex identification of in ovo avian embryos and its application as a management tool for endangered species conservation programs.

A simple, reliable, and safe protocol was developed for the collection of small amounts of blood from avian eggs of variable size and at early stages of development. Fifty eggs were used in the study; 40 were common chicken (Gallus domesticus) eggs, six were homing pigeon (Columba livia domestica) eggs, and four were burrowing owl (Athene cunicularia) eggs. Collection was attempted approximately halfway through incubation. The success rate for collection of blood or blood-tinged fluid from eggs was high, averaging 68% in the chicken eggs, 100% in the homing pigeon eggs, and 75% in the burrowing owl eggs. Collection did not affect subsequent hatchability. This blood could then be used to determine the sex of the embryo by utilizing a DNA probe or restriction fragment length polymorphism technique. Sex identification in ovo allowed the demographic management of small populations of birds within our institution.     

Acute phase proteins as a tool for differential diagnosis of wasting diseases in growing pigs

The concentrations of haptoglobin (Hp), C-reactive protein (CRP) and serum amyloid A (SAA) were measured in wasted pigs, first to evaluate their usefulness in the diagnosis of infectious, wasting diseases in pigs, and second, to evaluate whether their concentrations can distinguish the lymphoid depletion score in the lymph tissues of wasted affected pigs. Fifty-three wasted pigs and seven specific pathogen free (SPF) pigs were postmortem examined. Gross lesions were evaluated and samples for histopathological, immunohistochemical, molecular biology and microbiological analysis were taken. Thirty-one pigs were diagnosed as postweaning multisystemic wasting syndrome (PMWS) and 22 as porcine respiratory disease complex (PRDC). Lymphoid depletion degree in lymph tissues of PMWS and PRDC affected pigs was determined. Serum Hp was significantly higher in pigs with PRDC in comparison with the PMWS affected pigs. Serum CRP concentration was significantly lower in pigs with PRDC than in PMWS affected pigs (P<0.001). CRP and SAA levels increased with the lymphoid depletion score, presenting statistical differences between pigs with no depletion and pigs with low, moderate or severe lymphoid depletion (P<0.05, P<0.05 and P<0.001 for CRP and P<0.01, P<0.01 and P<0.01 for SAA, respectively). Hp was higher in pigs with no or low depletion compared with the pigs suffering severe lymphoid depletion (P<0.001 and P<0.05, respectively).     

J亚群白血病的病理学观察及PCR诊断

从某肉种鸡场取疑似J亚群白血病的自然发病鸡，剖检，观察病理学特征(光镜、电镜)。随后对该场进行ALV-J抗体ELISA检测，发现感染率达28％，从中选取部分抗体阳性鸡及阴性鸡剖检，取肝进行ALV-J特异性PCR检测。结果：自然发病鸡病变明显，在肝、脾、肾、睾丸(卵巢)肺等多种组织肿大，并有大小不等的灰白色结节。镜检：病灶内及肿瘤主要由密集的髓细胞组成，在大脑、小脑坐骨神经中未见。电镜，肿块中的髓细胞样瘤细胞呈圆形、核圆形或椭圆形，体积大小不一、染色质边集，胞浆中溶酶体增多，有些电子密度较高，有些趋于溶解，肝细胞体积增大，核浓缩或淡染，胞浆中线粒体增多，肿胀，嵴减少或消失，在胞浆膜下有病毒粒子存在。PCR结果：6例抗体阳性鸡和部分自然病例PCR阳性而2只对照鸡PCR阴性。通过以上证据可知，病变明显的和抗体阳性的鸡PCR结果全部为阳性，证明鸡体内病毒与抗体共存，而抗体阴性，病毒阳性的结果未出现，说明此肉种鸡场感染的ALV-J大部分是由于水平传播造成的。     

内源和外源性禽白血病病毒鉴别PCR检测方法的建立

为建立简单快捷的内、外源性禽白血病病毒(ALV)的鉴别检测方法,本研究根据外源性ALVA亚群标准株RAV-1的p27、env基因以及内源性ALVE亚群标准株ev1的env基因的保守序列,设计3对特异性引物,可分别对ALV、外源性ALV(A、B亚群)和内源性ALV(E、J亚群)进行扩增,扩增产物分别为793bp、387bp和234bp,通过对各反应条件的优化建立了同时检测并鉴别内、外源性ALV的多重PCR方法。该方法特异性良好、灵敏度可达到2×103copies,利用该方法和ELISA对5份现地病鸡组织样品和10枚疑似感染内源性ALV的鸡胚进行检测,结果表明:4份病鸡样品均扩增出3条特异性片段;而9枚鸡胚仅扩增出793bp和234bp的特异性片段,2种检测方法的符合率为100%。该方法为内、外源性ALV的临床鉴别诊断奠定了基础。