Auftreten und Nachweis von Fusarium oxysporum und F. proliferatum an Steck- und Saatzwiebeln

The pathogen Fusarium oxysporum f. sp. cepae inducing the Fusarium basal rot mainly spreads in warmer cultivation regions due to its adaptibility to high temperature. Meanwhile the pathogen occurs in Germany as well, especially in years with relatively high average temperature during the growing season. Phytopathological investigations of 300 symptomless onion bulbs showed a contamination rate of approximately 10% with regard to Fusarium spp, with F.?oxysporum proving to be the predominant species. Onion sets planted in these fields were latently infected with F.?oxysporum at rates of 19?C98%. Unexpectedly, the contaminated sets did not indispensably lead to a high occurrence of plants exhibiting characteristic symptoms of Fusarium basal rot such as wet and dry rot. Presumably, the development of symptoms is particularly affected by given climatic conditions. The results of pathogenicity tests of isolated Fusarium spp. isolates under controlled conditions support this assumption. The inoculation of the substrate with selected Fusarium spp. isolates resulted in a reduction of emergence by up to 70% under controlled conditions, which are suboptimal with regard to the cultivation of onions. The emergence of plants was not affected by Fusarium spp. under optimal cultivation of onions. However, under optimal cultivation conditions a reduction of plant growth occurred in a subsequent growth stage. Beside F.?oxysporum, F.?proliferatum could be detected in onion bulbs as well as seeds. The proportion of contaminated seeds accounted to 62%. Both species F.?oxysporum and F.?proliferatum proved to be pathogenic in onion although their isolates varied much in their virulence.     

Fusarium oxysporum,F. proliferatum and F. redolens associated with basal rot of onion in Finland

In recent years in Finland, Fusarium infections in onions have increased, both in the field and in storage, and Fusarium species have taken the place of Botrytis as the worst pathogens causing post‐harvest rot of onion. To study Fusarium occurrence, samples were taken from onion sets, harvested onions and also from other plants grown in the onion fields. Isolates of five Fusarium species found in the survey were tested for pathogenicity on onion. Fusarium oxysporum was frequently found in onions and other plants, and, of the isolates tested, 31% caused disease symptoms and 15% caused growth stunting in onion seedlings. Fusarium proliferatum, a species previously not reported in Finland, was also identified. Over 50% of the diseased onion crop samples were infected with F. proliferatum, and all the F. proliferatum isolates tested were pathogenic to onion. Thus, compared to F. oxysporum, F. proliferatum seems to be more aggressive on onion. Also some of the F. redolens isolates were highly virulent, killing onion seedlings. Comparison of the translation elongation factor 1α gene sequences revealed that the majority of the aggressive isolates of F. oxysporum f. sp. cepae group together and are distinct from the other isolates. Incidence and relative proportions of the different Fusarium species differed between the sets and the mature bulbs. More research is required to determine to what extent Fusarium infections spoiling onions originate from infected onion sets rather than the field soil.     

Occurrence and Pathogenicity of Fusarium Species in Cereals in Finland1

Several Fusarium species occurred abundantly in spring cereal seed samples studied in 1966, 1968 and 1972 in Finland. A total of 17 species of Fusarium were isolated and identified. The most frequently isolated species were F. avenaceum (Fr.) Sacc., F. culmorum (W. G. Sm.) Sacc., F. poae (Peck) Wr. and F. tricinctum (Cda) Sacc. These species were found in more than 40% of the seed samples from 1972. The same 4 Fusarium species in addition to F. graminearum Schwabe were used in the pathogenicity test. Artificially inoculated spring wheat and barley seeds were grown in the field during the growing season of 1973. Of these 5 species F. culmorum was clearly the most pathogenic. This species significantly lowered the shooting percentage and the yield of both cereals. Foot rot assessment also revealed F. culmorum as the most damaging species. Natural soil-borne infection obviously increased the foot and root rot, and thus the soil-borne F. culmorum strongly affected all treatments. In the harvested seed F. poae dominated in all treatments, but F. culmorum still occurred most abundantly in the seed lot harvested from plots originally inoculated with this species.     

Pathogenicity of fungi collected in northern Ghana to Striga hermonthica

Thirteen fungal species were isolated from diseased plants of Striga hermonthica (Del.) Benth in northern Ghana. The pathogenicity of 12 isolates of the fungal species including Curvularia fallax Boed, Fusarium equiseti (Corda) Sacc., Fusarium equiseti var. bullatum (Sherb.) Wollenw., F. oxysporum Schlecht, F. solani (Mart) Sacc., Macrophonuina phasealina (Tassi) Goidan, and Sclerotium rolfsii (Sacc.) were evaluated against S. hermonthica under controlled environmental conditions. All isolates were pathogenic to S. hermonthica when propagated on wheat (Triticum aestivum L.) grains and incorporated pre-planting into the soil. However, their virulence differed. Two isolates of F. oxysporum and one isolate of F. solani reduced the emergence of S. hermonthica by 88%, 98%, and 76%, respectively. Sorghum (Sorghum bicolor (L.) Moench) yield was increased by 26% when S. hermonthica was controlled. In contrast, in the control treatment with S. hermonthica no yield could be obtained. The F. oxysporum isolates were not pathogenic on sorghum. Germination tests indicated that the F. oxysporum isolates were highly pathogenic to S. hermonthica seeds. Although the F. solani isolate reduced the emergence of S. hermonthica in the pot experiments, it did not influence germination. This indicates that pathogens may attack different stages in the life cycle of S. hermonthica.     

A selective agar medium for isolation,enumeration and morphological identification of Fusarium proliferatum

A selective agar medium based on macerated date fruits was developed for the isolation, enumeration and morphological identification of Fusarium proliferatum from soil and from infected tissues of various plants (including: onion bulbs, corn ears and stems, and various weed tissues). The selective date medium enhances the formation of polyphialide and longer chains of conidia for better separation from other related Fusarium species which also grow and proliferate on this medium. Furthermore, the date medium enables microscopic distinction among other closely related Fusarium species, e.g. F. oxysporum and F. verticillioides. Fruits of the date cultivars Medjoul and Deglet Noor provided the most useful results as compared with other cultivars tested. The date medium can serve as a selective medium for direct isolation and enumeration of F. proliferatum, as it suppresses the development of other soil fungi and plant pathogens such as Macrophomina phaseolina, Sclerotium rolfsii and Rhizoctonia solani, as well as bacteria.     

Note: Survey of seedborne fungi of sudanese cultivars of onion,with new records

Through incubation of onion (Allium cepa L.) seed samples on potato dextrose agar and moist filter papers at 28±2°C, 32 species and four varieties belonging to 19 genera of fungi were determined as seedborne in this crop. Among them, 23 species are new reports to the mycoflora of onion seeds.Aspergillus (11 species and three varieties, ∼42.1% of the total colony count of fungi) was the most prevalent genus:A. niger (∼19.7%) was found at the highest rate in the seeds, followed byA. parasiticus (∼17.3%,A. oryzae (∼17.3%) andA. flavus (∼14.5%). The genusAspergillus was followed byPenicillium (∼12.4%),Sclerotium (∼7.1%),Fennellia, Rhizopus, Chaetomium, Drechslera andAlternaria (∼12.4%),Fusarium, Emericella andByssochlamys (∼7.1%), whereas the remaining eight genera displayed a low level of infection (∼10%). Twenty-seven species, three varieties and 12 genera represent Hyphomycetes; four genera, three species and one variety — Ascomycotina; one genus and one species — Zygomycotina; two genera and two species — other Deuteromycotina; and one genus — Oomycetes. Some species, which are known to cause devastating pre- and postharvest diseases to onion crops, were recovered from the seeds of this crop, suggesting the high possibility of their transmission by seed. http://www.phytoparasitica.org posting July 14, 2004.     

Seed mycoflora ofLens esculenta and their biocontrol by chitosan

Thirty-two fungal species belonging to 17 genera were recorded on 45 seed samples of lentil (Lens esculenta) collected from different governorates in Egypt. The prevalent genera wereAlternaria, Aspergillus, Cladosporium, Fusarium andPenicillium. Chitosan enhanced suppression of seedborne mycoflora, as estimated using either agar plates or a blotter test of lentil seed samples. These results suggested an alternative non-toxic means for controlling seedborne fungi. Furthermore, pretreatment of lentil seeds with chitosan significantly reduced the natural contamination with mycotoxins — aflatoxins, ochratoxin A, citrinin and zearalenone — under storage conditions for 6 months.     

Isolation of the most common Fusarium species and the effect of soil solarisation on main pathogenic species in different climatic zones of Iran

Understanding the distribution pattern of the Fusarium species can help prevent crop diseases and large yield losses. While several approaches have been used to control soil-borne pathogens, soil solarisation has shown promising results in managing these pathogens. The main objectives of this study were to: (i) describe the biogeography of Fusarium species in four different climatic zones in Iran and (ii) explain the effect of soil solarisation on main pathogenic Fusarium species in wheat grains, beans and date palms. A total of 12 sub-samples were collected from four different climatic zones including, Rasht (humid), Zanjan (semi-arid), Isfahan (extra-arid) and Ahwaz (arid). For precise identification, molecular-phylogenetic analyses of the species were also performed. From these four sites 17 Fusarium species were recovered. F. solani complex, F. oxysporum and F. equiseti were the only species found in all four regions; whereas F. compactum, F. sambucinum and F. fujikuroi were restricted to Ahwaz, Zanjan and Rasht, respectively. Furthermore, soil solarisation treatments were applied to F. pseudograminearum, F. solani and F. oxysporum, as the main cause of root rot pathogens and wilt disease of wheat, bean and date palm, respectively. After 6 weeks of soil solarisation application, the population densities of these species were decreased from 900 to 100 CFU g^?1 in F. solani, from 600 to 50 CFU g^?1 in F. oxysporum and from 550 to 0 CFU g^?1 in F. pseudograminearum showing a promising result in controlling soil-borne pathogens. Mycogeography of Fusarium species and the effect of soil solarisation can help improve the management control strategies of these soil-borne fungi.     

Determination of seedborne fungi and detection of aflatoxins in sudanese fenugreek seeds

Following incubation of fenugreek(Trigonella foenum- graecum L.) seeds on potato dextrose agar and moist filter papers at 28±2°C, 59 species and 11 varieties belonging to 21 genera of fungi were determined as seedborne in fenugreek crops. Among these isolates, 45 species and 9 varieties are new records for this crop; and two species are new to the mycoflora of Sudan:Aspergillus stellifer andEmericella variecolor. The genusAspergillus (15 species and 8 varieties) is the most prevalent, followed byDrechslera (3 species),Rhizopus (3 species),Alternaria andFusarium (6 species each),Emericella (4 species and 2 varieties)Cladosporium andPenicillium (4 species each),Chaetomium (3 species) andCurvularia (3 species and one variety). The remaining 11 genera displayed low level of infection. Of the common pathogens of fenugreek plants,Fusarium oxysporum (2.13%) was recovered from the seeds of this crop. Thin layer Chromatographic analysis of chloroform extracts of 13 seed samples showed that two samples were naturally contaminated with aflatoxins B₁, B₂, G₁ and G₂ (7.5–35.2 μg/kg). http://www.phytoparasitica.org posting Nov. 4, 2001.     

棉籽带枯萎病菌检验方法的研究

棉籽带菌是远距离传病的主要途径。病棉株种子带菌率0.01—46.8%。带菌部位以种壳为主,但子叶、胚均带菌。棉籽上除带枯萎病菌外,还带有半棵、串珠、茄病、木贼等几种镰刀菌及其他杂菌,干扰检验。文中介绍一种选择性培养基,其成分为:甲基纤维素1克、KH_2PO_4克、蛋白胨5克、MgSO_4·7H_2O0.5克、K_2S_20.2克、KCl 0.6克,NH_4NO_30.3克、五氯硝基苯0.1克、蔗糖20克、链霉素0.1克、琼脂20克、蒸馏水1000毫升。应用其进行分离培养棉籽,可根据菌落形态特征及颜色反应,较容易地检验出棉花枯萎病菌。     

Fusarium oxysporum schlecht. in Israel

Out of 208 isolates ofF. oxysporum, 158 produced toxic reactions when applied to rabbit skin. This fungus, ubiquitous in the soils of Israel, was the most prevalent component of theFusarium flora in the unirrigated (but not in the irrigated) soils sampled.F. oxysporum var.redolens was common only on unfertilized plots of heavy, unirrigated soils.F. oxysporum was a major constituent of theFusarium flora isolated from most of the 450 samples of 20 field and garden crops, but less common in 98 samples of citrus, avocado and mango fruits. It ranks among the most destructive pathogens of cucurbits (exceptCucurbita pepo), tomatoes, onions, and gladioli in Israel, but causes almost no damage to Brassicae, peas or cotton. In pathogenicity tests with 207 isolates from nine field and two fruit crops, numerous isolates caused seedling mortality, with watermelon, onion, cucumber, tomato and eggplant being the most susceptible. Spore measurements on 160 isolates from plants and 355 from soils, showed that spore size was not markedly affected by plant source or by irrigation, but did differ between soil samples taken at 5 and 20 cm depth, and from manured or unfertilized soils.     

Identity and pathogenicity of <Emphasis Type="Italic">Fusarium</Emphasis> species associated with crown rot on wheat (<Emphasis Type="Italic">Triticum</Emphasis> spp.) in Turkey

An extensive survey was carried out to collect Fusarium species colonizing the lower stems (crowns) of bread wheat (Triticum aestivum L.) and durum wheat (T. durum Desf.) from different wheat growing regions of Turkey in summer 2013. Samples were collected from 200 fields representing the major wheat cultivation areas in Turkey, and fungi were isolated from symptomatic crowns. The isolates were identified to species level by sequencing the translation elongation factor 1-alpha (TEF1-α) gene region using primers ef1 and ef2. A total of 339 isolates representing 17 Fusarium species were isolated. The isolates were identified as F. culmorum, F. pseudograminearum, F. graminearum, F. equiseti, F. acuminatum, F. brachygibbosum, F. hostae, F. redolens, F. avenaceum, F. oxysporum, F. torulosum, F. proliferatum, F. flocciferum, F. solani, F. incarnatum, F. tricinctum and F. reticulatum. Fusarium equiseti was the most commonly isolated species, accounting for 36% of the total Fusarium species isolated. Among the damaging species, F. culmorum was the predominant species being isolated from 13.6% of sites surveyed while F. pseudograminearum and F. graminearum were isolated only from 1% and 0.5% of surveyed sites, respectively. Six out of the 17 Fusarium species tested for pathogenicity caused crown rot with different levels of severity. Fusarium culmorum, F. pseudograminearum and F. graminearum caused severe crown rot disease on durum wheat. Fusarium avenaceum and F. hostae were weakly to moderately virulent. Fusarium redolens was weakly virulent. However, F. oxysporum, F. equiseti, F. solani, F. incarnatum, F. reticulatum, F. flocciferum, F. tricinctum, F. brachygibbosum, F. torulosum, F. acuminatum and F. proliferatum were non-pathogenic. The result of this study reveal the existence of a wide range of Fusarium species associated with crown rot of wheat in Turkey.     

The Elegans fusaria causing wilt disease of carnation. I. Taxonomy

The distinction of the wilt disease pathogen of carnationFusarium (oxysporum var.)redolens fromF. oxysporum (var.oxysporum) is considered. Previous reports that isolates of both taxa cause indistinguishable diseases in carnation are confirmed.F. (oxysporum var.)redolens andF. oxysporum were found to form one variable complex on morphological criteria. Apparently, host specialization rather than morphological variation reflects the evolutionary relationships in theFusarium sectionElegans. The distinction ofF. redolens fromF. oxysporum does therefore not seem justified, neither at specific nor at varietal level.Samenvatting Het onderscheid tussenFusarium (oxysporum var.)redolens enF. (oxysporum var.)oxysporum als verwekkers van verwelkingsziekte bij anjer wordt ter discussie gesteld. Fytopathologisch onderzoek bevestigde vermeldingen in de literatuur dat voor anjer pathogene isolaten van beide soorten ziekten veroorzaken die niet te onderscheiden zijn; dit is ook bekend voor andere gewassen. Op morfologische gronden blekenF. (oxysporum var.)redolens enF. oxysporum één variabel complex te vormen. Kennelijk geeft de pathogene specialisatie inFusarium sectieElegans de evolutionaire verwantschappen beter weer dan de morfologische variatie. Het onderscheiden vanF. redolens naastF. oxysporum is daarom noch als soort, noch als variëteit gerechtvaardigd.     

Pathogenic variation and molecular characterization of <Emphasis Type="Italic">Fusarium</Emphasis> species isolated from wilted Welsh onion in Japan

Thirty-two isolates of Fusarium species were obtained from wilted Welsh onion (Allium fistulosum) grown on nine farms from six regions in Japan and identified as F. oxysporum (18 isolates), F. verticillioides (7 isolates), and F. solani (7 isolates). The pathogenicity of 32 isolates was tested on five commercial cultivars of Welsh onion and two cultivars of bulb onion in a seedling assay in a greenhouse. The Fusarium isolates varied in the degree of disease severity on the cultivars. Five F. oxysporum isolates (08, 15, 17, 22, and 30) had a higher virulence on the cultivars than the other isolates. The host range of these five isolates was limited to Allium species. Molecular characterization of Fusarium isolates was performed using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis of the internal transcribed spacer (ITS) regions of ribosomal DNA. The 32 isolates were grouped into eight types (four types for F. oxysporum, one for F. verticillioides, and three for F. solani). Restriction patterns of the ITS region were not related to pathogenicity. However, the haplotypes obtained with five enzymes (RsaI, HinfI, HaeIII, ScrFI, and MspI) and the phylogenetic analysis permitted the discernment of the three Fusarium species. The PCR-RFLP analysis should provide a rapid, simple method for differentiating Fusaruim species isolated from wilted Welsh onion in Japan.     

Morphological and molecular identification and PCR amplification to determine the toxigenic potential of Fusarium spp. isolated from maize ears in southern Poland

The average amount of precipitation in spring and summer 2010 and 2011 coupled with relatively high temperatures caused massive Fusarium spp. infection of maize and yield losses in southern Poland. In order to examine the cause of this disease outbreak, Fusarium spp. were isolated and fungal strains were identified based on morphological characters and species-specific PCR assays. A total of 200 maize samples were processed, resulting in the obtention of 71 strains, which belonged to five Fusarium species, F. poae being the predominant one (74.56%). Other isolates were identified as F. graminearum, F. oxysporum, F. verticillioides and F. proliferatum. PCR-based detection of mycotoxin-synthesis-pathway genes was also used to determine the potential of the analyzed strains to produce trichothecenes (DON and NIV) and fumonisins (FUM). Only 14 isolates revealed the potential to produce DON (11 strains) and FUM (3 strains). HPLC analyses of grain samples revealed the presence of DON only – other mycotoxins were not detected. Moreover, 57.1% of potentially mycotoxin-producing isolates indicated the toxicity in a biological test.     

Das Artenspektrum der Gattung Fusarium an Weizen und Roggen in Bayern in den Jahren 2003 und 2004

During the years 2003 and 2004 grains of wheat and rye were examined for the occurrence of different Fusarium species in Bavaria. The data obtained indicate that rye is infected with Fusarium spp. on a lower level than wheat. Overall F. graminearum was the most important Desoxynivalenol (DON) producing species with infected kernels per sample up to 18,5% whereas F. culmorum recedes more in the background. In addition F. poae was detected in high amounts: up to 28,5% kernels per sample were infected. Also the incidence of F. avenaceum was high. In contrast F. equiseti, F. tricinctum, F. sporotrichioides, F. oxysporum and Microdochium nivale were detected to a much lower extent.     

Effect of some organic amendments on onion bulb rot

The effect of soil amended with stalks of sunflower (Helianthus annuus L.), alfalfa (Medicago sativa L.) and Hungarian vetch (Vicia pannonica Crantz) on onion bulb rot caused byFusarium oxysporum Schlecht. f.sp.cepae (Hanz.) Snyder Hansen andAspergillus niger v. Tieghem was tested in a soil naturally infested with the pathogens under field conditions. All treatments significantly reduced bulb rot incidence. The fungal and antibacterial populations varied among all of the amended tested soils. Heterotrophic fungal populations were more effective than heterotrophic bacterial populations in the suppression of disease. The highest population of fungal microflora was found in plots amended with sunflower stalks. The carbon-to-nitrogen ratio and available moisture content of amended soils have an indirect suppressive role on disease, by increasing the heterotrophic fungal population. http://www.phytoparasitica.org posting June 18, 2002.     

Yucca schidigera extract: a potential biofungicide against seedborne pathogens of sorghum

Treatment of seeds with an aqueous extract of yucca (YE), Yucca schidigera, was evaluated for antifungal activity against seedborne pathogens as well as its effect on seed germination and seedling growth of sorghum (Sorghum bicolor). The antifungal effect of YE was observed against Leptosphaeria sacchari (syn. Phoma sorghina) when the extract was applied at 2·5 and 10% concentrations. At 10% concentration, YE significantly reduced not only the incidence of L. sacchari, but also that of Fusarium spp., Cochliobolus lunatus (syn. Curvularia lunata) and Cladosporium spp. The effect of 10% YE on seedborne fungi was broader than the fungicide fludioxonil, particularly with regard to Fusarium. Furthermore, the number of normal, healthy‐looking seedlings increased in a dose‐responsive manner with YE treatment. Seedling vigour was also stimulated by YE but no correlation was observed with the concentrations tested. Under glasshouse conditions, the treatment of seeds with 10% YE increased the emergence of seedlings and plant height and reduced the number of seedlings with crown rot compared to negative controls and saponin. The positive effect was similar to the effect obtained with fungicide‐treated seeds. Treatment of seeds with synthetic saponin inhibited seedborne fungi less effectively and also negatively affected germination and vigour of the seedlings, compared to the treatment with YE. The results demonstrate an agronomic potential for the use of YE as a biofungicide for seed treatment of sorghum. The difference between the antifungal and the vigour‐stimulating effects of YE warrants further investigation.     

Reduced volume application of fungicides for the control of onion rots

A survey was conducted to define the fungi population contaminating onion bulbs in Israel during three growing seasons. Significant rots were found to be caused byBotrytis allii, B. cinerea andAspergillus niger. All the onion stocks tested showed infections, but the severity and identity of the pathogens varied between seasons.B. cinerea andB. allii were the most prevalent fungi in winter-harvested onions. Species ofAspergillus, Penicillium, Fusarium, Rhizopus andTrichoderma were also isolated. The first two were the only species found on summer onions. High fungal contamination had been the main factor affecting an attempt to improve the storage quality and shelf life of the harvested bulbs. Chemical disinfection using a reduced-volume application (RVA) technique was efficient in controlling the major storage rots (caused byA. niger andB. cinerea) of the bulbs, without the major disadvantages of the dipping method. The rate of control was directly correlated with the cover density of the deposited fungicide, but not with the amount deposited. The RVA technique should enable prolongation of postharvest shelf life and storability of onion bulbs.     

Early PCR-based detection of Fusarium culmorum,F. graminearum,F. sporotrichioides and F. poae on stem bases of winter wheat throughout Poland

Foot rot and crown rot are fungal diseases of wheat caused by a complex of Fusarium species. They have a huge economic impact mainly due to yield reduction. A survey was conducted to identify four Fusarium species, occurring on wheat stem bases, using species-specific PCR assays in samples collected during spring of 2012. The dominant species was F. graminearum, which was identified in above 64 % of samples. F. culmorum was detected in 15.71 %, F. poae in 15.71 % and F. sporotrichioides in 5.71 % wheat fields. Most of the wheat fields in the eastern Poland were infected with at least one or two of Fusarium species, while in central Poland no Fusarium species were identified in most of the fields. The presence of F. graminearum tends to favor the presence of F. culmorum and this effect was visible also for F. poae and F. sporotrichioides. The frequency of F. graminearum and F. culmorum detections were highest where wheat crops were preceded by maize and in the samples from late sown fields. The opposite observation was made for F. poae and F. sporotrichioides, where the number of detections of these species was higher in samples from early sown fields. The number of detected Fusarium species was significantly lower in samples collected from fields protected with autumn herbicide in comparison to unprotected fields. The rate of autumn N fertilization did not affect the number of Fusarium detections.