Possible contributions of volatile-producing bacteria to soil fungistasis

Soil fungistasis can adversely affect the germination and growth of most fungal species in the field. Among the inhibitors, volatiles of microbial origins are potentially very important. In this study, we investigated the frequency and identity of bacteria producing fungistatic volatiles. Among the 1018 bacterial isolates tested, 328 were found to produce antifungal volatiles that could inhibit spore germination and mycelial growth of two nematicidal fungi Paecilomyces lilacinus and Pochonia chlamydosporia. A phylogenetic analysis based on restriction fragment length polymorphism (RFLP) and 16S rDNA sequence placed the 328 bacteria in five groups: Alcaligenaceae, Bacillales, Micrococcaceae, Rhizobiaceae and Xanthomonadaceae. Volatile compounds of 39 bacterial isolates were identified by gas chromatography/mass spectrum (GC/MS). Tests with commercially available antifungal compounds suggested that seven volatile compounds of bacterial origins (acetamide, benzaldehyde, benzothiazole, 1-butanamine, methanamine, phenylacetaldehyde and 1-decene) likely play important roles in soil fungistasis.     

Volatile organic compounds (VOCs) in soils

Soils may act as sources or sinks of volatile organic compounds (VOCs). Many of the formed VOCs are produced by microorganisms, and it would be a challenge to investigate soil microbial communities by studying their VOC profile. Such “volatilomics” would have the advantage of avoiding extraction steps that are often a limit in genomic or proteomic approaches. Abundant literature on microbially produced VOCs is available, and in particular novel detection methods allow additional insight. The aim of this paper was to give an overview on the current knowledge of microbial VOC emissions from soils.     

Soil volatile analysis by proton transfer reaction-time of flight mass spectrometry (PTR-TOF-MS)

We analyzed the volatile organic compounds (VOCs) emitted from different soils by using the PTR-MS-TOF technique under laboratory conditions and compared them with soil chemical biochemical activities. The emitted VOCs were related to soil microbial biomass, soil respiration and some soil enzyme activities so as to evaluate if size and activity of soil microbial communities influenced the soil VOCs profiles. Our results showed that the emitted VOCs discriminated between soils with different properties and management, and differences in the VOCs emission profiles were likely related to the active metabolic pathways in the microbial communities of the three studied soil. Our results also showed that some soil enzyme activities such as β-glucosidase and arylsulfatase were possibly involved in the release of compounds fueling microbial metabolic pathways leading to the production of specific VOCs. It was concluded that the PTR-MS-TOF technique is suitable for analyze VOCs emission from soil and that studies comparing soil enzyme activities and soil volatile profiles can reveal the origin of VOCs and give further insights on microbial activity and soil functionality.     

Sorption of volatile organic contaminants by soils (a review)

The sorption of volatile organic compounds (VOCs)—the most common, mobile, but relatively poorly studied contaminants—by soils is considered. Typical VOCs of different classes, the major processes determining their retention by soils, the main rules and mechanisms of VOC sorption, and the experimental methods of its measurement are characterized. The common approximation models and geometrical shapes of VOC sorption isotherms are discussed. Provisional analytical ranges of experimental VOC sorption values in the aqueous and the vapor phases at low and high relative concentrations are reported.     

Interannual and seasonal changes in the soil exchange rates of monoterpenes and other VOCs in a Mediterranean shrubland

Information about soil VOC inventories and exchange rates in different soils is very scarce. Seasonality of soil VOC exchange rates is also largely unknown, despite the increasing interest in some soil volatile compounds, such as monoterpenes, because of their important role in soil ecology. We aimed to explore and quantify soil VOC exchange rates in a Mediterranean shrubland and their seasonality. Measurements of soil VOC exchange were taken using GC‐MS and PTR‐MS techniques, together with soil temperature, soil moisture and soil CO₂ efflux measurements, during two annual campaigns with contrasting precipitation. Methanol, acetic acid, ethyl acetate, acetaldehyde, acetone, C₃ and C₄ carbonyls (such as methyl ethyl ketone), α‐pinene and limonene, showed the highest emission rates. Maximum soil monoterpene emission rates were very low (0.003 nmol m^?2 s^?1) compared with foliar monoterpene emission rates. The emission rates of the other VOCs were also low (maximum 0.8 nmol m^?2 s^?1) except for methanol (1.2 nmol m^?2 s^?1). Maximum soil uptake rates for some VOCs, such as methanol and acetonitrile (ranging from ?0.1 to ?0.5 nmol m^?2 s^?1) were, however, comparable with foliar uptake rates. Further studies are needed to corroborate these results and the possible importance of the soil VOC sink in regional chemistry‐climate models. Long‐term severe drought increased soil monoterpene emission rates in this Mediterranean shrubland. The increases seem to be linked to changes in the soil’s physical properties induced by low soil moisture. Unlike monoterpenes, other soil VOC emission rates decreased when soil moisture was low. The results suggest a seasonal control of soil temperature on the emission rates of monoterpenes and other VOCs. The emission rates increase with soil temperature. Positive correlations between the VOC exchange rates and the soil CO₂ fluxes suggest that phenology of roots and microorganisms also controls seasonal changes in soil VOCs in this Mediterranean shrubland.     

Evaluation and identification of potential organic nematicidal volatiles from soil bacteria

Naturally occurring volatile compounds with nematicidal activities (NAs) are of significant economical importance in agriculture and forestry. In this study, volatile organic compounds (VOCs) produced by 200 isolates of soil bacterial were evaluated in in vitro experiments. Our results identified that among the 200 bacterial isolates, 149 (74.5%) and 165 (82.5%) exhibited a greater than 20% NA against the free-living nematode Panagrellus redivivus and the pinewood nematode Bursaphelenchus xylophilus, respectively. Among them, 22 isolates showed 100% NA against P. redivivus and seven isolates showed 100% NA against B. xylophilus. When exposed to nematicidal volatiles, nematodes gradually reduced their movements within 1-12 h after treatment, and most stopped moving completely after 24 h. Our analysis indicated significant variation in nematicidal capability of the VOCs not only among bacterial species but also among isolates of the same species. Volatiles of representative isolates were extracted using solid-phase micro-extraction (SPME) and their structures identified using gas chromatography-mass spectrometry (GC-MS). The detected so volatile compounds included alcohols, aldehydes, ketones, alkenes and ethers. Of the 20 VOCs with strong NA (?80%), nine (phenol, 2-octanol, benzaldehyde, benzeneacetaldehyde, decanal, 2-nonanone, 2-undecanone, cyclohexene and dimethyl disulfide) displayed 100% NA to both model nematodes. Furthermore, five compounds (terpineol, benzeneethanol, propanone, phenyl ethanone and nonane) showed different NA to B. xylophilus (75-100%) and P. redivivus (17.02-100%).     

Nematicidal activity of volatile organic compounds emitted by Brassica juncea,Azadirachta indica,Canavalia ensiformis,Mucuna pruriens and Cajanus cajan against Meloidogyne incognita

Understanding the effect of plant volatile organic compounds (VOCs) on soil nematodes and water may explain plant damage in the field and how some nematode management strategies reduce soil nematode populations. M. incognita is a damaging plant pathogenic nematode that affects crops worldwide. The aims of this study were to evaluate the effect of the VOCs emitted by five common crops used for soil incorporation to control the second-stage juveniles (J₂) of Meloidogyne incognita. To investigate the “in vitro” role of water in the relationship between nematodes and plant VOCs. And to identify the volatile molecules by gas chromatography (GC/MS). The method used permitted the volatile molecules from macerated plant organs to only contact the J₂ nematodes by air. Plants organs from all plants macerated with and without water emitted VOCs that immobilized J₂ nematodes, with higher levels emitted when the plant organs were macerated without water. Only water exposed to VOCs from neem and mustard leaves were capable of immobilizing M. incognita J₂. The M. incognita J₂ exposed to neem and mustard VOCs and inoculated in tomato seedlings resulted in reduced gall formation and nematode reproduction, showing the nematicidal effect of the plant-emitted VOCs. GC/MS analysis revealed the presence of 58 and 32 molecules in the VOCs emitted from neem and mustard macerates, respectively. Alcohols were found in both the neem and mustard VOCs. Esters were found in the neem VOCs, and sulfur-containing compounds, mostly isothiocyanates, were found in mustard. Our results demonstrate that plant VOCs contain diversified molecules that affect M. incognita mobility, pathogenicity and reproduction. Nematode toxic VOCs may be retained in water, which prevents the VOCs from escaping into the air and causing the water to become toxic to nematodes. These data may explain part of the role of VOCs in the biofumigation process, through plant incorporation with the soil, and suggests that irrigation performed directly after incorporation may trap the VOCs in soil water and thereafter retain nematode toxicity longer than incorporation that is performed later.     

Use of electronic nose technology to measure soil microbial activity through biogenic volatile organic compounds and gases release

Gas and volatile organic compounds (VOCs) release in soil is known to be linked to microbial activity and can differently affect the life of organisms in soil. Electronic noses (E-noses) are sensing devices composed of sensor arrays able to measure and monitor gases and VOCs in air. This is the first report on the use of such a sensing device to measure specifically microbial activity in soil. In the present study, γ-irradiated sterilised soil was inoculated with Pseudomonas fluorescens. To be sure for a rapid microbial growth and activity, two pulses of nutrient solution with organic and inorganic C, N, P and S sources were added to soil and the resulting microcosms were incubated for 23 d. During the incubation, respiration and enzyme activities of acid phosphatase, β-glucosidase, fluorescein diacetate hydrolase and protease, were measured, and microbial growth as global biomass of vital cells based on substrate-induced respiration (SIR-C_mic) and enumeration of viable and culturable cells by means of dilution plate counts (CFU) were also monitored. Concurrently, VOCs and/or gas evolution in the headspace of the soil microcosms were measured through the E-nose, upon their adsorption on quartz crystal microbalances (QCMs) comprising the sensory device. The E-nose typically generated an odorant image (olfactory fingerprint) representative of the analysed samples (soils) and resulting from the concurrent perception of all or most of the analytes in headspace, as it commonly happens when several selective but not specific sensors are used together (array). The basic hypothesis of this study was that different soil ecosystems expressing distinct microbial metabolic activities, tested through respiration and enzyme activities, might generate different olfactory fingerprints in headspace. Furthermore, the possibility to detect several substances at the same time, released from the soil ecosystems, possibly deriving from both abiotic and biotic (microbial metabolism) processes provides an “odorant image” representative of the whole ecosystem under study. The E-nose here used succeeded in discriminating between inoculated and non-inoculated ecosystems and in distinguishing different metabolic and growth phases of the inoculated bacteria during incubation. Specifically, E-nose responses were proved highly and significantly correlated with all hydrolytic activities linked to the mobilisation of nutrients from soil organic matter and their cycling, with CO₂ fluxes (respiration and presumed heterotrophic fixation) and with P. fluorescens population dynamics during exponential, stationary and starvation phases measured by SIR-C_mic and CFUs. Interestingly, the E-nose successfully detected soil microbial activity stimulated by nutrient supply, even though none of the catalytic activities tested directly produced VOCs and/or gases. The E-nose technology was then proved able to supply a real holistic image of microbial activity in the entire gnotobiotic and axenic soil ecosystems.     

Characteristics of soil microbiostasis

No increase in numbers of fungi, actinomycetes and bacteria in 3 days, as measured by selective media, was used as an indication of the presence of fungistasis, actinostasis and bacteriostasis in soil, respectively. The population of fungi, actinomycetes and bacteria did not increase in 9 of 10 soils tested indicating concurrent existence of fungistasis, actinostasis and bacteriostasis in a wide range of soils. When Penicillium funiculosum, Streptomyces scabies and Agrobacterium radiobacter were used as test organisms, these three types of microbiostasis were detected simultaneously in all 8 soils tested. All three groups of microorganisms flourished in autoclaved soil, and microbiostasis was restored to sterilized soil by reinoculation with 1% natural soil or microorganisms including antibiotic and non-antibiotic producers. Soil microbiostasis was annulled completely or partially by addition of different nutrie0nts. Bacteriostasis appeared to be the easiest to overcome with nutrients among these three types of microbiostasis.     

Fungistasis and general soil biostasis - A new synthesis

In most soils, fungal propagules are restricted to a certain extent in their ability to grow or germinate. This phenomenon, known as soil fungistasis, has received considerable attention for more than five decades, mostly due to its association with the general suppression of soil-borne fungal diseases. Here, we review major breakthroughs in understanding the mechanisms of fungistasis. Integration of older fungistasis research and more recent findings from different biological and chemical disciplines has lead to the consensus opinion that fungistasis is most likely caused by a combination of microbial activities, namely withdrawal of nutrients from fungal propagules and production of fungistatic compounds. In addition, recent findings indicate that there are mechanistic links between these activities leading towards an integrated theory of fungistasis. Among the potentially fungistatic compounds volatiles have received particular attention. Whereas it has long been assumed that fungistasis is the result of the metabolic activity of the total soil microbial biomass, more recent research points at the importance of activities of specific components of the microbial community. These insights into fungistasis have also formed the basis for strategies to increase general soil suppression. Besides these basic and practical aspects of fungistasis, its impact on fungal ecology, in particular on fungal exploration strategies, is discussed. Finally, we take a closer look at plant-soil feedback experiments to demonstrate the occurrence of fungistasis-like phenomena and to suggest that fungistasis may be part of a much wider phenomenon: general soil biostasis.     

Substrate-induced volatile organic compound emissions from compost-amended soils

The agronomic effects of composts, mineral fertiliser and combinations thereof on chemical, biological and physiological soil properties have been studied in an 18-year field experiment. The present study aimed at tracing treatment effects by evaluating the volatile organic compound (VOC) emission of the differently treated soils: non-amended control, nitrogen fertilisation and composts (produced from organic waste and sewage sludge, respectively) in combination with nitrogen fertiliser. Microbial community structure was determined by denaturing gradient gel electrophoresis (DGGE). Aerobic and anaerobic soil VOC emission was determined after glucose amendment using proton transfer reaction–mass spectrometry (PTR-MS). After inducing VOC production by substrate (glucose) addition and at the same time reducing oxygen availability to impair degradation of the produced VOCs, we were able to differentiate among the treatments. Organic waste compost did not alter the VOC emissions compared to the untreated control, whilst sewage sludge composts and mineral fertilisation showed distinct effects. This differentiation was supported by DGGE analysis of fungal 18S rDNA fragments and confirms earlier findings on bacterial communities. Three major conclusions can be drawn: (1) VOC patterns are able to discriminate among soil treatments. (2) Sewage sludge compost and mineral fertilisation have not only the strongest impact on microbial community composition but also on VOC emission patterns, but specific tracer VOCs could not be identified. (3) Future efforts should aim at a PTR-MS-linked identification of the detected masses.     

Volatile organic compound (VOC) emissions from soil and litter samples

The production of nonmethane volatile organic compounds (VOCs) by soil microbes is likely to have an important influence on soil ecology and terrestrial biogeochemistry. However, soil VOC production has received relatively little attention, and we do not know how the emissions of microbially-produced VOCs vary across soil and litter types. We collected 40 root-free soil and litter samples from a diverse array of ecosystem types and conducted laboratory incubations in order to compare the types and quantities of VOCs emitted. VOC production rates were higher in litter samples than in soil samples, and the rates were correlated with microbial biomass and CO₂ production levels. On average, the litter samples produced more types of VOCs than the soil samples with litters emitting a number of VOCs (including terpenoids) that were not generally emitted from the soil samples. Across all of the samples, we identified 100 VOCs, and more than 70% of these compounds could not be positively identified by GC/MS analyses. Of those VOCs that could be identified, furfural and similar furan compounds were noteworthy in that they were emitted in large amounts from nearly every sample examined. Other identifiable VOCs produced across a range of soil and litter samples included propanoic and butanoic acids, which are known products of microbial fermentation. Together these results suggest a need for additional research examining the specific factors influencing VOC emissions from soil and the identification of specific VOCs emitted from soil and litter as many of these compounds are likely to have important effects on belowground ecology.     

Interannual and interseasonal soil CO2 efflux and VOC exchange rates in a Mediterranean holm oak forest in response to experimental drought

Climate models predict drier conditions in the next decades in the Mediterranean basin. Given the importance of soil CO₂ efflux in the global carbon balance and the important role of soil monoterpene and volatile organic compounds (VOCs) in soil ecology, we aimed to study the effects of the predicted drought on soil CO₂, monoterpenes and other VOC exchange rates and their seasonal and interannual variations. We decreased soil water availability in a Mediterranean holm oak forest soil by means of an experimental drought system performed since 1999 to the present. Measurements of soil gas exchange were carried out with IRGA, GC and PTR-MS techniques during two annual campaigns of contrasting precipitation. Soil respiration was twice higher the wet year than the dry year (2.27±0.26 and 1.05±0.15, respectively), and varied seasonally from 3.76±0.85 μmol m⁻² s⁻¹ in spring, to 0.13±0.01 μmol m⁻² s⁻¹ in summer. These results highlight the strong interannual and interseasonal variation in CO₂ efflux in Mediterranean ecosystems. The drought treatment produced a significant soil respiration reduction in drought plots in the wet sampling period. This reduction was even higher in wet springs (43% average reduction). These results show (1) that soil moisture is the main factor driving seasonal and interannual variations in soil respiration and (2) that the response of soil respiration to increased temperature is constrained by soil moisture. The results also show an additional control of soil CO₂ efflux by physiology and phenology of trees and animals. Soil monoterpene exchange rates ranged from −0.01 to 0.004 nmol m⁻² s⁻¹, thus the contribution of this Mediterranean holm oak forest soil to the total monoterpenes atmospheric budget seems to be very low. Responses of individual monoterpenes and VOCs to the drought treatment were different depending on the compound. This suggests that the effect of soil moisture reduction in the monoterpenes and VOC exchange rates seems to be dependent on monoterpene and VOC type. In general, soil monoterpene and other VOC exchange rates were not correlated with soil CO₂ efflux. In all cases, only a low proportion of variance was explained by the soil moisture changes, since almost all VOCs increased their emission rates in summer 2005, probably due to the effect of high soil temperature. Results indicate thus that physical and biological processes in soil are controlling soil VOC exchange but further research is needed on how these factors interact to produce the observed VOCs exchange responses.     

Volatile organic compound emission and biochemical properties of degraded Ultisols ameliorated by no tillage and liming

The Ultisols in the Raña de Cañamero area in Southwest Spain showed aluminum (Al) phytotoxicity, and the clearance of natural vegetation and decades of intensive conventional agriculture caused the deplation of soil organic matter (SOM). Therefore, we studied the long-term effects of no tillage and liming using sugar beet foam (SF) and red gypsum (RG), alone or in combination, on the restoration of Ultisols affected by acidification, Al phytotoxicity, and SOM depletion. We measured the main soil chemical properties, soil microbial biomass, soil enzyme activities involved in carbon, nitrogen, phosphorus, and sulfur mineralization, and the emission of volatile organic compounds (VOCs). The results indicated that liming effectively neutralized the soil acidity in the long term and, in combination with no tillage, significantly increased soil microbial biomass and enzyme activities. Twenty-three VOCs were detected using the proton transfer reaction-time of flight (PTR-ToF) technique, and both liming and tillage changed the VOC emission patterns. The greatest difference in VOC emission pattern was observed between no-tilled un-amended soils and tilled lime-amended soils, suggesting the activation of different metabolic pathways within the microbial communities of soils under different management. Differences in VOC emission patterns could be attributed to the decomposition of carbohydrates, which were also sustained by the higher enzyme activities in the lime-amended soils.     

Heavy metal and volatile organic chemical removal and treatment in on-site wastewater systems

In Wisconsin, motor vehicle waste fluids (MVWF) enter catch basins along with rinse waters and are discharged to drainfields (soil absorption systems) after mixing with domestic wastewater in a septic tank (systems installed prior to 1992). The purpose of this study was to determine if removal/treatment of heavy metals and volatile organic chemicals (VOCs) found in spent oils, greases, and solvents occurs in drainfields that receive MVWFs. Soil samples were collected beneath and soil gas samples were collected above three gravel beds in drainfields installed in loamy sand or silt loam soils. Cadmium, chromium, and lead concentrations in soil 15 cm and greater beneath beds in loamy sand and silt loam soils were similar to background concentrations. Heavy metals in drainfields would most likely be found in the clogging layer at the infiltrative surface of gravel and soil. The VOCs 1,3,5-trimethylbenzene and m- and p-xylenes were found beneath beds in loamy sand soils; concentrations of detected VOCs ranged from 20–270 mg kg^?1. Volatile organic chemicals were not detected beneath the bed in silt loam soils. Drainfields in loamy sand soil appear to provide less treatment of VOCs compared to drainfields in silt loam soils. Volatile organic chemicals were found in soil gas above drainfields in both soil types. Thus, some VOCs diffuse from the drainfield to the soil surface.     

Identification and use of potential bacterial organic antifungal volatiles in biocontrol

Bacteria, isolated from canola and soybean plants, produced antifungal organic volatile compounds. These compounds inhibited sclerotia and ascospore germination, and mycelial growth of Sclerotinia sclerotiorum, in vitro and in soil tests. Ascospore germination in cavity slides was inhibited 54-90% by the volatile producers. When mycelial plugs or the sclerotia, exposed to these volatiles, were transferred to fresh agar plates, the pathogen could not grow, indicating the fungicidal nature of the volatiles. Head space volatiles, produced by bacteria, were trapped with activated charcoal, by passing nitrogen continuously over shake cultures for 48 h. The compounds were eluted from the charcoal with methylene chloride and identified using Gas Chromatography-Mass Spectrometry (GC-MS). The volatile compounds included aldehydes, alcohols, ketones and sulfides. Of the 23 compounds assayed for antifungal activity in divided Petri plates, with filter-disks soaked with these compounds (100 and 150 μl), only six compounds completely inhibited mycelial growth or sclerotia formation, suggesting their potential role in biological control. The compounds are benzothiazole, cyclohexanol, n-decanal, dimethyl trisulfide, 2-ethyl 1-hexanol, and nonanal. Volatiles may play an important role in the inhibition of sclerotial activity, limiting ascospore production, and reducing disease levels. Studies are under way to understand this phenomenon under field conditions. This is the first report on the identification and use of bacterial antifungal organic volatiles in biocontrol.     

农业土壤中频繁施用有机质提高土壤抑菌作用

Soil-borne plant pathogens are among the most important limiting factors for the productivity of agro-ecosystems.Fungistasis is the natural capability of soils to inhibit the germination and growth of soil-borne fungi in the presence of optimal abiotic conditions.The objective of this study was to assess the effects of different soil managements,in terms of soil amendment types and frequency of application,on fungistasis.For this purpose,a microcosm experiment was performed by conditioning a soil with frequent applications of organic matter with contrasting biochemical quality (i.e.,glucose,alfalfa straw and wheat straw).Thereafter,the fungistasis response was assessed on four fungi (Aspergillus niger,Botrytis cinerea,Pyrenochaeta lycopersici and Trichoderma harzianum).Conditioned soils were characterized by measuring microbial activity (soil respiration) and functional diversity using the BIOLOG EcoPlatesTM method.Results showed that irrespective of the fungal species and amendment types,frequent applications of organic matter reduced fungistasis relief and shortened the time required for fungistasis restoration.The frequent addition of easily decomposable organic compounds enhanced soil respiration and its specific catabolic capabilities.This study demonstrated that frequent applications of organic matter affected soil fungistasis likely as a result of higher microbial activity and functional diversity.     

Biochemical quality of organic amendments affects soil fungistasis

Soilborne plant pathogens are among the most important limiting factors for the productivity of agro-ecosystems. Identifying reliable and effective control methods is crucial for efficient biological control. Soil fungistasis is the capability of soils to inhibit the germination and growth of soil-borne fungi in presence of optimal abiotic conditions. The aim of this study is to clarify the relationships between soil amendments with plant residues spanning a wide variety of biochemical quality and soil fungistasis. Microcosms experiments were performed with 42 different plant residues and the effect on soil fungistasis was assessed by using four different fungi (Aspergillus niger, Botrytis cinerea, Pyrenochaeta lycoperici and Trichoderma harzianum). We measured soil respiration and FDA enzymatic activity and compared classic litter proximate chemical analysis with ¹³C-CPMAS NMR spectroscopy. Results showed that quality of organic amendments is a major controlling factor of soil fungistasis. The dramatic relief of soil fungistasis when soil was amended with lignin poor, but labile C rich, substrates gives strong support to the competition-based hypothesis. The positive correlation between soil respiration and fungal growth further supports the competition hypothesis. Finally, ¹³C NMR results showed a relationship between soil fungistasis and the biochemical quality of plant residues, and provided a quantitative assessment of the time required for fungistasis restoration after organic materials application.     

活化过硫酸钠氧化土壤对挥发性有机污染物吸附特性的影响

活化过硫酸钠(Sodium persulfate,SPS)氧化技术是一种新型的土壤修复技术。为了更科学地评价化学氧化处理后土壤的环境风险,本文通过亚铁离子活化过硫酸钠法对有机质(Organic matter,OM)含量存在显著差别的两种土壤进行氧化处理,比较了活化过硫酸钠氧化前后两种土壤样品对3种挥发性有机污染物的吸附特性。结果表明,亚铁活化的SPS能够氧化土壤中腐殖酸和胡敏素类的有机质。对OM含量较高的1号土,SPS氧化对有机质的去除率为71.9%。而对OM含量较低的2号土,SPS氧化对有机质的去除率为49.9%。1号土样对3种挥发性有机物的吸附以分配作用为主,氧化后的1号土样对3种物质的吸附机制不变,但吸附量有所增加;2号土样对3种挥发性有机污染物的吸附有一定的非线性,而氧化后的2号土样对3种物质的吸附线性特征增强。吸附数据用对数形式的Freundlich方程拟合得到分配系数lg Kf值,比较有机碳标化后的分配系数lg Kfoc,氧化后的土壤有机质对3种挥发性有机污染物的吸附特性有所提高。分析表明,SPS氧化了有机质中较多的极性组分(如羧基及羟基等),从而使处理后的土壤中有机质的非极性增强,强化了对非极性化合物的吸附。     

不同土壤玉米根际挥发性有机物组成和微生物群落特征

【目的】土壤理化性质和微生物群落的差异显著影响玉米根际挥发性有机物 (volatile organic compounds,VOCs) 的产生和释放。对根际VOCs的深入研究有望为充分挖掘根际生物学潜力和根际调控做出积极贡献。【方法】采集山东德州、河北涞水、河北保定、江西南昌、河南孟津、河南商丘等6个地区的旱地耕层土壤进行为期两个月的玉米盆栽试验,利用顶空固相微萃取联合气相色谱–质谱联用检测技术对根际土壤挥发性有机物进行了分析鉴定,利用实时荧光定量PCR技术对根际细菌和真菌进行了定量分析,利用高通量测序技术对根际细菌16S和真菌ITS进行了测序。【结果】从6个旱地土壤中共检测出44种VOCs,主要是烷烃、烯烃、酯类、胺类、有机酸和芳香类化合物,其中多种化合物与植物或微生物的生长代谢密切相关。胺类化合物N-Benzyl-N-ethyl-p-isopropylbenzamide和D-2-Bromolysergic acid diethylamide在6个土壤中均被检出,占总量的54.2%;其次检出最多的是烷烃和烯烃,占总量的31.1%和7.6%。江西南昌土壤释放的VOCs在数量和丰富度上均显著高于其他土壤,且大部分为烷烃和烯烃类化合物;从河北保定土壤中检出了6种特有的有机酸和酯类化合物。供试6种土壤中,河南商丘和河北保定的细菌数量显著高于其他四个地方。南昌土壤真菌数量显著较高,但其细菌数量、丰富度和多样性均显著低于其他土壤。6种土壤中的主要细菌依次为Thaumarchaeota(奇古菌门)、Actinobacteria(放线菌门)、Proteobacteria(变形菌门)、Chloroflexi(绿弯菌门)、Acidobacteria(酸杆菌门)、Firmicutes(厚壁菌门) 和 Unclassified(未分类门),占总细菌群落的92.1%;主要真菌依次为Ascomycota(子囊菌门)、Basidiomycota(担子菌门) 和 Chytridiomycota(壶菌门),占总真菌群落的98.3%。绿弯菌门仅在南昌土壤中占绝对优势,而南昌土壤中奇古菌门和变形菌门的相对丰度显著比其他地区少;子囊菌门在6种土壤中均为绝对优势真菌门。玉米根际释放的VOCs数量和丰富度与pH、硝态氮、细菌多样性和真菌多样性呈显著负相关 (P < 0.05),与铵态氮和真菌数量呈极显著正相关 (P < 0.01);与主要细菌门中的奇古菌门、变形菌门和酸杆菌门呈显著负相关 (P < 0.05),与绿弯菌门呈极显著正相关 (P < 0.01),但是与主要真菌门相关性不显著。【结论】理化性质不同的玉米根际土壤中,微生物群落结构与组成存在显著差异。pH是影响微生物生长的重要因素,酸性土壤中的真菌数量显著高于中性土壤,但是其细菌数量、微生物群落丰富度和多样性均显著小于中性土壤。VOCs的产生和释放受土壤、微生物和植物等众多因素的影响,土壤有机质含量越高、透气性越好、微生物数量越多时,释放的VOCs越丰富。