Soil enzyme activities during the 2011 Texas record drought/heat wave and implications to biogeochemical cycling and organic matter dynamics

Extreme droughts and heat waves due to climate change may have permanent consequences on soil quality and functioning in agroecosystems. During November 2010 to August 2011, the Southern High Plains (SHP) region of Texas, U.S., a large cotton producing area, received only 39.6 mm of precipitation (vs. the historical avg. of 373 mm) and experienced the hottest summer since record keeping began in 1911. Several enzyme activities (EAs) important in biogeochemical cycling were evaluated in two soils (a loam and a sandy loam at 0–10 cm) with a management history of monoculture (continuous cotton) or rotation (cotton and sorghum or millet). Samplings occurred under the most extreme drought and heat conditions (July 2011), after precipitation resulted in a reduction in a drought severity index (March 2012), and 12 months after the initial sampling (July 2012; loam only). Eight out of ten EAs, were significantly higher in July 2011 compared to March 2012 for some combinations of soil type and management history. Among these eight EAs, enzymes key to C (β-glucosidase, β-glucosaminidase) and P cycling (phosphodiesterase, acid and alkaline phosphatases) were significantly higher (19–79%) in July 2011 than in March 2012 for both management histories regardless of the soil type (P > 0.05). When comparing all sampling times, the activities of alkaline phosphatase, aspartase and urease (rotation only) showed this trend: July 2011 > March 2012 > July 2012. Activities of phosphodiesterase, acid phosphatase, α-galactosidase, β-glucosidase and β-glucosaminidase were higher in July 2011 than July 2012 in at least one of the two management histories. Total C was reduced significantly from July 2011 to March 2012 in the rotation for both soils. Only the activities of arylsulfatase (avg. 36%) and asparaginase showed an increase from July 2011 to March 2012 for both soil types, which may indicate they have a different origin/location than the other enzymes. EAs continued to be a fingerprint of the soil management history (i.e., higher EAs in the rotation than in monoculture) during the drought/heat wave. This study provided some of the first evidence of the adverse effects of a natural, extreme drought and heat wave on soil quality in agroecosystems as indicated by EAs involved in biogeochemical cycling.     

Animal manure and anhydrous ammonia amendment alter microbial carbon use efficiency,microbial biomass,and activities of dehydrogenase and amidohydrolases in semiarid agroecosystems

The potential negative impact of agricultural practices on soil and water quality is of environmental concern. The associated nutrient transformations and movements that lead to environmental concerns are inseparable from microbial and biochemical activities. Therefore, biochemical and microbiological parameters directing nitrogen (N) transformations in soils amended with different animal manures or inorganic N fertilizers were investigated. Soils under continuous corn cultivation were treated with N annually for 5 years at 56, 168, and 504 kg N ha⁻¹ in the form of swine effluent, beef manure, or anhydrous ammonia. Animal manure treatments increased dehydrogenase activity, microbial biomass carbon (C_mic) and N (N_mic) contents, and activities of amidohydrolases, including l-asparaginase, urease, l-glutaminase, amidase, and β-glucosaminidase. Soils receiving anhydrous ammonia demonstrated increased nitrate contents, but reduced microbiological and biochemical activities. All treatments decreased C_mic:organic C (C_org) ratios compared with the control, indicating reduced microbial C use efficiency and disturbance of C equilibrium in these soil environments. Activities of all enzymes tested were significantly correlated with soil C_org contents (P < 0.001, n = 108), but little correlation (r = 0.03, n = 36) was detected between C_mic and C_org. Activities of amidase and β-glucosaminidase were dominated by accumulated enzymes that were free of microbial cells, while activities of asparaginase and glutaminase were originated predominately from intracellular enzymes. Results indicated that soil microbial and biochemical activities are sensitive indicators of processes involved in N flow and C use efficiency in semiarid agroecosystems.     

Patterns and classification by soil taxonomy of the soils of the southern cook islands

The soil patterns of the six larger islands of the Southern Cook Group in the South Pacific are described. Classification is according to Soil Taxonomy, and six soil orders are recognised: Oxisols, Ultisols, Mollisols, Alfisols, Inceptisols and Entisols, which are further subdivided into 12 suborders, 15 great groups, and 25 subgroups. Classification to series level is outlined in tabular form. The soil pattern on individual islands is basically one of concentricity. The older, more weathered soils (Oxisols and Ultisols) occur on remnant surfaces and grade with either decreasing altitude or age of land surface to Alfisols, Mollisols, Inceptisols, and Entisols, respectively. Many of the soils associated with the coralline makateas have shallow contacts to the underlying limestone and have been separated in lithic subgroups.     

Temporal variation of soil compaction and deterioration of soil quality in pasture areas of Colombian Amazonia

In the Amazon basin, tropical rainforest is being slashed and burned at accelerated rates for annual crops over a couple of years, followed by forage grasses. Because of poor management, the productivity of established pastures declines in a few years so that grazing plots are abandoned and new areas are deforested. Previous studies in the region report higher bulk density in soils under pasture than in similar soils under forest. The objective of this study was to detect changes in the physical quality of the topsoil of nutrient-poor Typic Paleudults in the colonisation area of Guaviare, Colombian Amazonia, and analyse the effect of soil deterioration on pasture performance. Temporal variation of soil compaction under pasture was analysed by comparing natural forest taken as control and pasture plots of Brachiaria decumbens (Stapf) grouped into three age ranges (<3, 3–9, >9 years). Evidence of soil compaction through cattle trampling, after clearing the primary forest, included the formation of an Ap horizon with platy structure and dominant greyish or olive colours, reflecting impaired surface drainage, the increase of bulk density and penetration resistance, and the decrease of porosity and infiltration rate. From primary forest to pastures older than 9 years, bulk density of the 5–10 cm layer increase was 42% in fine-textured soils and 30% in coarse-textured soils. Penetration resistance ranged from 0.45 MPa under forest to 4.25 MPa in old pastures, with maximum values occurring at 3–12 cm depth in pastures older than 9 years. Average total soil porosity was 58–62% under forest and 46–49% under pasture. Basic infiltration dropped from 15 cm h⁻¹ in the original forest conditions to less than 1 cm h⁻¹ in old pastures. Crude protein content and dry matter yield of the forage grass steadily decreased over time. No clear relationship between declining protein content as a function of pasture age and changes in chemical soil properties was found, but there was a high negative correlation (r=−0.81) between protein content and bulk density, reflecting the effect of soil compaction on pasture performance. After about 9–10 years of use, established grass did no longer compete successfully with invading weeds and grazing plots were abandoned. As land is not yet a scarcity in this colonisation area, degraded pastures are seldom rehabilitated.     

Spatial distribution of glomalin-related soil protein and its relationships with root mycorrhization,soil aggregates,carbohydrates, activity of protease and β-glucosidase in the rhizosphere of Citrus unshiu

Relationships between the spatial distributions of glomalin-related soil protein (GRSP) and soil aggregates, carbohydrates or relevant enzymes are poorly studied. We found that two categories of GRSP, the easily extractable Bradford-reactive soil protein (EE-BRSP) and total BRSP (T-BRSP), respectively ranged between 0.3–0.6 and 0.5–0.8 mg/g DW soil, and these two BRSPs decreased with the increase of soil depth (0–40 cm) in the rhizosphere of a 22-year-old Citrus unshiu orchard. Both EE-BRSP and T-BRSP were significantly positively correlated with mycorrhization, 0.25–0.50 mm soil water-stable aggregates, water-extractable or hydrolyzable carbohydrates, and β-glucosidase, but significantly negatively correlated with protease. Our results demonstrate that the spatial distribution of GRSP is significantly affected by mycorrhization, soil carbohydrate, β-glucosidase and protease.     

Long-term effect on soil biochemical status of a Vertisol under conservation tillage system in semi-arid Mediterranean conditions

Long-term field experiments are expected to provide important information regarding soil properties affected by conservation management practices. Several studies have shown that soil enzyme activities are sensitive in discriminating among soil management effects. In this study we evaluated the long-term effect of direct drilling (DD) under a crop rotation system (cereals–sunflower–legumes), on the stratification of soil organic matter content and on biochemical properties in a dryland in southwest Spain. The results were compared to those obtained under conventional tillage (CT). Soil biochemical status was evaluated by measuring the enzymatic activities (dehydrogenase, β-glucosidase, alkaline phosphatase and arylsulphatase) during the flowering period of a pea crop. Soil samples were collected in May 2007 at three depths (0–5, 5–10 and 10–20 cm).Total organic carbon (TOC) contents and values of soil enzyme activities were higher in soils subjected to DD than to CT, specifically at 0–5 cm depth. Although a slight decrease of TOC and enzymatic activities with increasing soil depth was observed, no significant differences were found among different depths of the same treatment. This could be related to the high clay content of the soil, a Vertisol. Enzyme activities values showed high correlation coefficients (from r = 0.799 to r = 0.870, p < 0.01) with TOC. Values of activity of the different enzymes were also correlated (p < 0.01).Values of stratification ratios did not show significant differences between tillage practices. The high clay content of the soil is responsible for this lack of differences because of the protection by clay mineral of TOC and soil enzymes activities.Long-term soil conservation management by direct drilling in a dryland farming system improved the quality of a clay soil, especially at the surface, by enhancing its organic matter content and its biological status.     

Soil amendments with organic wastes reduce the toxicity of nickel to soil enzyme activities

The effects of adding a crushed cotton gin compost (CCGC) and poultry manure (PM) on the biological properties of a Typic Xerofluvent soil contaminated with Ni were studied in the laboratory. Urease, BBA-protease, alkaline phosphatase, β-glucosidase and arylsulfatase activities were measured in soils containing seven concentrations (100, 250, 500, 1000, 2500, 5000 and 8000 mg kg⁻¹ soil) of Ni after four incubation times (1 day, 7 days, 15 days and 45 days). The resulting inhibition was compared with that of the enzymatic activities in the same soil containing similar concentrations of the Ni but amended with crushed cotton gin compost and poultry manure. The 50% ecological dose (ED₅₀) values were calculated by the two kinetic models used by Speir et al. [T.W. Speir, H.A. Kettles, A. Parshotam, P.L. Searle, L.N.C. Vlaar, A simple kinetic approach to derive the ecological dose value, ED50, for the assessment of Cr(VI) toxicity to soil biological properties, Soil Biol. Biochem. 27 (1995) 801–810] and by the sigmoidal dose–response model used by Haanstra et al. [L. Haanstra, P. Doelman, J.H. Oude Voshaar, The use of sigmoidal dose response curves in soil ecotoxicological research, Plant Soil 84 (1985) 293–297]. The urease, BBA-protease, β-glucosidase, alkaline phosphatase and arylsulfatase activities were higher in the organic amended soils (76%, >99.7%, >95.7%, >27.6% and >87.2%, respectively) than in the control soil. Also, the enzymatic activities were higher in CCGC-amended soils than in the PM-amended soils (51%, 20%, 11.2%, and 11.3% increase for urease, BBA-protease, β-glucosidase and alkaline phosphatase, respectively). For all soil enzymatic activities and at the end of the period of incubation, the ED₅₀ values were lowest in control soil, followed by PM and CGCC-amended soils. This may have been due to the adsorption capacity of Ni being higher in the humic acid (CGCC) than in the fulvic acid-amended soil (PM).     

Effects of thermally dried and composted sewage sludges on the fertility of residual soils from limestone quarries

Limestone quarrying reduces the land's capacity to support a complete functional ecosystem. Adding sewage sludge to mining residues facilitates the establishment of a vegetation cover and can stimulate C and N cycling.We aimed to evaluate the effects of three composted and three thermally dried sewage sludges, on some biological properties of two types of debris (extraction soil and trituration soil) from a limestone quarry. Lysimeters filled with debris-sludge mixtures and control soils were sampled immediately after preparation and after being left in the open for 13 months. Total carbohydrates (TCH), 0.5 M K₂SO₄ extractable (ECH) carbohydrates, 0.5 M K₂SO₄ extractable organic C (EOC), microbial biomass carbon (MBC), microbial respiration (MR), β-glucosidase activity and β-galactosidase activity were determined immediately after sampling. The treated soils were also analyzed for their more general physicochemical characteristics. Adding sewage sludge clearly improved the physicochemical and biological properties of the residual soil and the effect of the type of sludge was greater than that of the type of soil. The sludge effect was generally more durable over the trituration soil. The sludge effect decreased the most in MR and EOC followed by MBC and ECH. Total carbohydrates showed the least enhancement but the sludge effect on this endpoint had the smaller decrease with time. Root exudates and plant debris contributed to β-glucosidase and β-galactosidase activities in the treated soils. Activities present in mixtures partly corresponded to enzymes free in the soil aqueous face. β-Glucosidase was also partly associated with humified organic matter. Thirteen months after sludge addition a fraction of the organic matter present in soils was still moderately labile. Results observed in BMC and MR suggests the sludge did not cause major toxic effects on residual soils. The sludge effect differed with the pre and post treatments of the sludges; thermal drying made the sludge organic matter more easily decomposable.     

Land use influences soil fungal community composition across central Victoria,south-eastern Australia

Current theory expects that fungi, on the one hand, are spatially ubiquitous but, on the other, are more susceptible than bacteria to disturbance such as land use change due to dispersal limitations. This study examined the relative importance of location and land use effects in determining soil fungal community composition in south-eastern Australia. We use terminal restriction fragment length polymorphism (T-RFLP; primer pair ITS1-F–ITS4) and multivariate statistical methods (NMDS ordinations, ANOSIM tests) to compare relative similarities of soil fungal communities from nine sites encompassing three locations (ca 50–200 km apart) and four land uses (native eucalypt forest, Pinus radiata plantation, Eucalyptus globulus plantation, and unimproved pasture). Location effects were generally weak (e.g. ANOSIM test statistic R ≤ 0.49) and were, in part, attributed to minor differences in soil texture. By contrast, we found clear and consistent evidence of land use effects on soil fungal community composition (R ≤ 0.95). That is, soils from sites of the same land use grouped together in NMDS ordinations of fungal composition despite geographic separations of up to ca 175 km (native eucalypt forests) and 215 km (P. radiata plantations). In addition, different land uses from the same location were clearly separate in NMDS ordinations, despite, in one case, being just 180 m apart and having similar land use histories (i.e. P. radiata versus E. globulus plantation both established on pasture in the previous decade). Given negligible management of all sites beyond the early establishment phase, we attribute much of the land use effects to changes in dominant plant species based on consistent evidence elsewhere of strong specificity in pine and eucalypt mycorrhizal associations. In addition, weak to moderate correlations between soil fungal community composition and soil chemical variables (e.g. Spearman rank correlation coefficients for individual variables of 0.08–0.32), indicated a minor contributing role of vegetation-mediated changes in litter and soil chemistry. Our data provide evidence of considerable plasticity in soil fungal community composition over time spans as short as 6–11 years. This suggests that – at least within geographic zones characterised by more-or-less contiguous forest cover – soil fungal community composition depends most on availability of suitable habitat because dispersal propagules are readily available for colonisation after land use change.     

Changes in enzyme activities and microbial biomass after “in situ” remediation of a heavy metal-contaminated soil

Microbial properties such as microbial biomass carbon (MBC), arylsulfatase, β-glucosidase and dehydrogenase activities, and microbial heterotrophic potential, together with several chemical properties such as pH, CaCl₂ soluble heavy metal concentrations, total organic carbon and hydrosoluble carbon were measured to evaluate changes in soil quality, after “in situ” remediation of a heavy metal-contaminated soil from the Aznalcóllar mine accident (Southern Spain, 1998). The experiment was carried out using containers, filled with soil from the affected area. Four organic amendments (a municipal waste compost, a biosolid compost, a leonardite and a litter) and an inorganic amendment (sugarbeet lime) were mixed with the top soil at the rate of 100 Mg ha⁻¹. Unamended soil was used as control. Agrostis stolonifera L. was sown in the containers. The soil was sampled twice: one month and six months after amendment application. In general, these amendments improved the soil chemical properties: soil pH, total organic carbon and hydrosoluble carbon increased in the amended soils, while soluble heavy metal concentrations diminished. At the same time, higher MBC, enzyme activities and maximum rate of glucose mineralization values were found in the organically amended soils. Plant cover was also important in restoring the soil chemical and microbial properties in all the soils, but mainly in those that were not amended organically. As a rule, remediation measures improved soil quality in the contaminated soils.     

The impact of exogenous organic matter on SOM contents and microbial soil quality

Eight fertilization strategies were compared in a field trial on Alfisol in Belgium (humid temperate climate): cattle slurry (CSL); farmyard manure (FYM); vegetable, fruit and garden waste compost (VFG); high C/N farm compost (FCP1); low C/N farm compost (FCP2); exclusively mineral fertilizer (MIN N); no fertilization (NF+), no fertilization and no crop (NF?). After five growing seasons, VFG resulted in the highest soil organic C (1.46% SOC) and total N contents (0.117%TN). SOC and TN contents of the MIN N plots, on the other hand, remained unchanged and were even similar to those of NF+ plots, despite greater biomass production on the MIN N plots than on the NF+ plots. Application of organic matter mostly increased dehydrogenase, β-glucosidase and β-glucosaminidase activity, but only FYM raised the activity of all three enzymes significantly compared to MIN N. Of the five organic amendments tested, only VFG suppressed Rhizoctonia solani (65% suppressiveness). Plots treated with FCP1, on the other hand, were highly conducive to R. solani (28.3% suppressiveness). Suppressiveness against R. solani probably depended on the maturity and cellulose content of the organic amendments. Highest microbial biomass C contents were found in the VFG plots. PLFA 16:1ω5c contents sensitively reacted to the different treatments and were significantly higher in VFG than in MIN N plots (3.84 and 2.20 nmol g^?1 dry soil, respectively). Finally, a soil quality index was developed using stepwise canonical discriminant analysis. β-glucosaminidase and β-glucosidase activity, and TN content were the most important parameters of the index. According to this index, FYM resulted in a significantly higher soil quality than the other treatments. We conclude that farmyard manure seems to be the preferred organic amendment for maintaining soil quality in arable fields under temperate climatic conditions.     

Land use effects on microbial biomass C, β-glucosidase and β-glucosaminidase activities,and availability,storage, and age of organic C in soil

Microbial biomass, β-glucosidase and β-glucosaminidase activities, and availability, storage, and age of soil organic C were investigated after 26 years of conversion from sugarcane (Saccharum officinarum) to forest (Eucaliptus robusta or Leucaena leucocephala), pasture (mixture of tropical grasses), and to vegetable cropping (agriculture) in a vertisol in Puerto Rico. Soil organic C (SOC) at 0–100 cm was similar under Leucaena (22.8 kg C/m²), Eucalyptus (18.6 kg C/m²), and pasture (17.2 kg C/m²), which were higher than under agriculture (13.0 kg C/m²). Soil organic N (SON) at 0–100 cm was similar under the land uses evaluated which ranged from 1.70 (under agriculture) to 2.28 kg N/m² (under Leucaena forest). Microbial biomass C (MBC) and N (MBN) of the 0–15-cm soil layer could be ranked as: pasture > Leucaena = Eucalyptus > agriculture. The percentages of SOC and SON present as MBC and MBN, respectively, were nearly 1% in pasture and less than 0.50% in forest under Leucaena or Eucalyptus and agricultural soil. The activity of β-glucosidase of the 0–15-cm soil layer could be ranked as: Leucaena = Eucalyptus > pasture > agriculture; while β-glucosaminidase activity was ranked as: Eucalyptus > Leucaena = pasture > agriculture. The soil δ ¹³C changed from 1996 to 2006 in forest under Eucalyptus (18.7‰ to 21.2‰), but not under Leucaena (20.7‰ to 20.8‰). The soil under Leucaena preserved a greater proportion of old C compared to the forest under Eucalyptus; the former had an increased soil mineralizable C from the current vegetation inputs. The soil under agriculture had the lowest enzyme activities associated with C cycling, lowest percentage of SOC as MBC, highest percentage of SOC present as mineralizable C, and highest percentage of MBC present as mineralizable C compared to the other land uses.     

Carbon mineralization and properties of water-extractable organic carbon in soils of the south Loess Plateau in China

Addition of organic manure over thousands of years has resulted in the development of very fertile soils in parts of the Loess Plateau in Northwest China. This region also suffers from serious soil erosion. For that reason, afforestation of arable soils has taken place. The dynamics of soil organic matter in these soils affected by a very specific management and by land use changes is largely unknown. Therefore, we measured C mineralization in a 35-days incubation experiment and analyzed amounts and properties of water-extractable organic carbon (WEOC) in 12 topsoils of this region. The soils differed in land use (arable vs. forest) and in amounts of added organic manure. Afforestation of arable soils resulted in a distinct stabilization of organic C as indicated by the smallest C mineralization (0.48 mg C g⁻¹ C d⁻¹) and the highest C content (2.3%) of the studied soils. In the soils exposed to intensive crop production without regular addition of organic manure we found the largest C mineralization (0.85 mg C g⁻¹ C d⁻¹) and the lowest contents of organic C (0.9%). Addition of organic manure over a time scale of millennia resulted in high organic C contents (1.8%) and small C mineralization (0.55 mg C g⁻¹ C d⁻¹). The content of WEOC reflected differences in C mineralization between the soils quite well and the two variables correlated significantly. Water-extractable organic C decreased during C mineralization from the soil illustrating its mainly labile character. Carbon mineralization from soils was particularly large in soils with small specific UV absorbance of WEOC. We conclude that amounts and properties of WEOC reflected differences in the stability of soil organic C. Both afforestation of arable land and the long-term addition of organic manure may contribute to C accumulation and stabilization in these soils.     

Phosphorus limitation in microorganisms leads to high phosphomonoesterase activity in acid forest soils

We addressed the mechanistic basis for a negative correlation between soil pH and phosphomonoesterase activity, often found in various soils. Also in the present study, a significant negative correlation was observed between soil pH and phosphomonoesterase activity measured at pH 6.5 in Japanese acidic forest soils (3 Inceptisols, 3 non-allophanic Andisols, and 2 allophanic Andisols). A hypothesis that higher activity of phosphomonoesterase in acid forest soils results from increased synthesis of phosphomonoesterase by microorganisms in response to P limitation was tested. Soils with lower pH showed a lower optimum pH for phosphomonoesterase activity and greater activity at the optimum pH than other soils. To assess nutrient limitations of the soil microbial community, the effects of addition of C, N, or P on phosphomonoesterase and dehydrogenase activities, which is an intracellular enzyme and the activity of which reflects overall microbial activity, were examined in the soil samples. Addition of P increased dehydrogenase activity in some forest soils. Also, microorganisms in some soils were co-limited by C, N, and P. Response ratios (RR) of phosphomonoesterase and dehydrogenase activities in P-amended soil to their activity in non-amended soil were used to evaluate the response of soil microorganisms to P limitation. The ratio of RR-dehydrogenase to RR-phosphomonoesterase was strongly correlated with phosphomonoesterase activity at the optimum pH (P < 0.01). The results indicate that P limitation accounts for higher phosphomonoesterase activity in the more acid forest soils.     

Effects of Cover Crops on Soil Quality: Selected Chemical and Biological Parameters

Cover crops improve soil quality properties and thus land productivity. We compared soil chemical and biological changes influenced by hairy vetch (Vicia villosa Roth.) and cereal rye (Secale cereal) cover crops grown in Menfro silt loam (fine-silty, mixed, superactive, mesic Typic Hapludalfs), Mexico silt loam (fine, smectitic, mesic Vertic Epiaqualfs), or sand in the greenhouse. Cover crop biomass, soil β-glucosidase, β-glucosaminidase, and fluorescein diacetate (FDA) hydrolase activities, and soil chemical properties were measured at six, nine, and twelve weeks after planting. Cover crop biomass increased with highest (p < 0.0001) yields for hairy vetch and cereal rye in Menfro and Mexico soils, respectively. β-glucosaminidase, FDA, organic carbon (C), total nitrogen (N), and total phosphorus (P) contents significantly decreased in all soils for both cover crops. However, β-glucosidase activity significantly increased (p < 0.0001). Long-term field studies are needed to evaluate soil quality improvement under cover crops, especially for soils with marginal organic matter and fertility.     

Soil organic carbon and nitrogen in a Mollisol in central Ohio as affected by tillage and land use

Minimum tillage practices are known for increasing soil organic carbon (SOC). However, not all environmental situations may manifest this potential change. The SOC and N stocks were assessed on a Mollisol in central Ohio in an 8-year-old tillage experiment as well as under two relatively undisturbed land uses; a secondary forest and a pasture on the same soil type. Cropped systems had 51±4 (equiv. mass) Mg ha⁻¹ lower SOC and lower 3.5±0.3 (equiv. mass) Mg ha⁻¹ N in the top 30 cm soil layer than under forest. Being a secondary forest, the loss in SOC and N stocks by cultivation may have been even more than these reported herein. No differences among systems were detected below this depth. The SOC stock in the pasture treatment was 29±3 Mg ha⁻¹ greater in the top 10 cm layer than in cultivated soils, but was similar to those under forest and no-till (NT). Among tillage practices (plow, chisel and NT) only the 0–5 cm soil layer under NT exhibited higher SOC and N concentrations. An analysis of the literature of NT effect on SOC stocks, using meta-analysis, suggested that NT would have an overall positive effect on SOC sequestration rate but with a greater variability of what was previously reported. The average sequestration rate of NT was 330 kg SOC ha⁻¹ year⁻¹ with a 95% confidence interval ranging from 47 to 620 kg SOC ha⁻¹ year⁻¹. There was no effect of soil texture or crop rotation on the SOC sequestration rate that could explain this variability. The conversion factor for SOC stock changes from plow to NT was equal to 1.04. This suggests that the complex mechanisms and pathways of SOC accrual warrant a cautious approach when generalizing the beneficial changes of NT on SOC stocks.     

Organic soil amendments: Impacts on snap bean common root rot (Aphanomyes euteiches) and soil quality

Common root rot (causal agent Aphanomyes euteiches) is a major disease of commercially grown snap bean (Phaseolus vulgaris L.). Organic amendments hold potential to suppress plant diseases, which may be due to changes in soil biology and other soil properties. The objective of this study was to determine the potential of paper-mill residual by-products to suppress common root rot of snap bean in relation to soil properties. The study was done on soil (Plainfield sandy loam, Hancock, WI) from a field trial comparing annual applications of fresh paper-mill residuals (0, 22 or 33 dry Mg ha⁻¹) or composted paper-mill residuals (0, 38 or 78 dry Mg ha⁻¹). Soil was removed from each treatment that had been in place 3 years in April 2001 (1 year after last amendment) and on September 2001 (4 months after last amendment) and brought to the laboratory. Soils were incubated at field moisture content (25 °C) and periodically bioassayed with bean seedlings (9, 44, 84, 106, 137, 225 or 270 days after removal from the field) for snap bean root rot. Soils were sampled on the same day as the root rot bioassay and assayed for β-glucosidase, arylsulfatase and fluorescein diacetate hydrolysis activities (FDA), microbial biomass-C (MB_C) (by chloroform fumigation), water stable aggregation, and total C. There were large differences in snap bean root rot incidence between the field amendment treatments. The unamended field soil had high levels of disease incidence throughout the experiment but disease incidence tended to decrease over time in amended soils. The disease was suppressed by both fresh and composted paper-mill residuals, but the composted residuals at high rates had the lowest disease incidence (<40%) and produced healthiest plants. Root rot severity was strongly negatively correlated with total C (0.001 ≤ p) and arylsulfatase activity (0.001 ≤ p). β-Glucosidase activity was negatively correlated (0.05 ≤ p) with disease severity while soil MB_C showed inconsistent negative correlations with disease severity over the incubation sampling periods. Arylsulfatase activity was the best indicator for reflecting disease suppression. The amendments improved soil quality, which was exemplified by improved aggregation.     

The relationships among microbial parameters and the rate of organic matter mineralization in forest soils,as influenced by forest type

Vegetation type influences the rate of accumulation and mineralization of organic matter in forest soil, mainly through its effect on soil microorganisms. We investigated the relationships among forest types and microbial biomass C (MBC), basal respiration (R_B), substrate-induced respiration (R_S), N mineralization (N_min), specific growth rate μ, microbial eco-physiology and activities of seven hydrolytic enzymes, in samples taken from 25 stands on acidic soils and one stand on limestone, covering typical types of coniferous and deciduous forests in Central Europe. Soils under deciduous trees were less acidic than soils of coniferous forests, which led to increased mineralizing activities R_B and N_min, and a higher proportion of active microbial biomass (R_S/MBC) in the Of horizon. This resulted in more extractable organic C (0.5 M K₂SO₄) in soils of deciduous forests and a higher accumulation of soil organic matter (SOM) in coniferous forest soil. No effect of forest type on the microbial properties was detected in the Oh horizon and in the 0–10 cm layer. The microbial quotient (MBC/C_org), reflecting the quality of organic matter used for microbial growth, was higher in deciduous forests in all three layers. The metabolic quotient qCO₂ (R_B/MBC) and the specific growth rate μ, estimated using respiration growth curves, did not differ in soils of both forest types. Our results showed that the quality of SOM in coniferous forests supported microorganisms with higher activities of β-glucosidase, cellobiosidase and β-xylosidase, which suggested the key importance of fungi in these soils. Processes mediated by bacteria were probably more important in deciduous forest soils with higher activities of arylsulphatase and urease. The results from the stand on limestone showed that pH had a positive effect on microbial biomass and SOM mineralization.     

Near infrared spectroscopy for determination of various physical,chemical and biochemical properties in Mediterranean soils

The potential of near infrared (NIR) reflectance spectroscopy to predict various physical, chemical and biochemical properties in Mediterranean soils from SE Spain was evaluated. Soil samples (n = 393) were obtained by sampling 13 locations during three years (2003–2005 period). These samples had a wide range of soil characteristics due to variations in land use, vegetation cover and specific climatic conditions. Biochemical properties also included microbial biomarkers based on phospholipid fatty acids (PLFA). Partial least squares (PLS) regression with cross validation was used to establish relationships between the NIR spectra and the reference data from physical, chemical and biochemical analyses. Based on the values of coefficient of determination (r²) and the ratio of standard deviation of validation set to root mean square error of cross validation (RPD), predicted results were evaluated as excellent (r² > 0.90 and RPD > 3) for soil organic carbon, Kjeldahl nitrogen, soil moisture, cation exchange capacity, microbial biomass carbon, basal soil respiration, acid phosphatase activity, β-glucosidase activity and PLFA biomarkers for total bacteria, Gram-positive bacteria, actinomycetes, vesicular-arbuscular mycorrhizal fungi and total PLFA biomass. Good predictions (0.81 < r² < 0.90 and 2.5 < RPD < 3) were obtained for exchangeable calcium and magnesium, water soluble carbon, water holding capacity and urease activity. Resultant models for protozoa and fungi were not accurate enough to satisfactorily estimate these variables, only permitting approximate predictions (0.66 < r² < 0.80 and 2.0 < RPD < 2.5). Electrical conductivity, pH, exchangeable phosphorus and sodium, metabolic quotient and Gram-negative bacteria were poorly predicted (r² < 0.66 and RPD < 2). Thus, the results obtained in this study reflect that NIR reflectance spectroscopy could be used as a rapid, inexpensive and non-destructive technique to predict some physical, chemical and biochemical soil properties for Mediterranean soils, including variables related to the composition of the soil microbial community composition.