Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus)

Soil-dwelling insect herbivores are significant pests in many managed ecosystems. Because eggs and larvae are difficult to observe, mathematical models have been developed to predict life-cycle events occurring in the soil. To date, these models have incorporated very little empirical information about how soil and drought conditions interact to shape these processes. This study investigated how soil temperature (10, 15, 20 and 25 °C), water content (0.02 (air dried), 0.10 and 0.25 g g^?1) and pH (5, 7 and 9) interactively affected egg hatching and early larval lifespan of the clover root weevil (Sitona lepidus Gyllenhal, Coleoptera: Curculionidae). Eggs developed over 3.5 times faster at 25 °C compared with 10 °C (hatching after 40.1 and 11.5 days, respectively). The effect of drought on S. lepidus eggs was investigated by exposing eggs to drought conditions before wetting the soil (2–12 days later) at four temperatures. No eggs hatched in dry soil, suggesting that S. lepidus eggs require water to remain viable. Eggs hatched significantly sooner in slightly acidic soil (pH 5) compared with soils with higher pH values. There was also a significant interaction between soil temperature, pH and soil water content. Egg viability was significantly reduced by exposure to drought. When exposed to 2–6 days of drought, egg viability was 80–100% at all temperatures but fell to 50% after 12 days exposure at 10 °C and did not hatch at all at 20 °C and above. Drought exposure also increased hatching time of viable eggs. The effects of soil conditions on unfed larvae were less influential, except for soil temperature which significantly reduced larval longevity by 57% when reared at 25 °C compared with 10 °C (4.1 and 9.7 days, respectively). The effects of soil conditions on S. lepidus eggs and larvae are discussed in the context of global climate change and how such empirically based information could be useful for refining existing mathematical models of these processes.     

Effects of trifluralin on soil carbon mineralization at different temperature conditions

Trifluralin is a herbicide intensively used in Turkish cotton agriculture. The recommended field dose [(RFD), 480 g active ingredient l^?1], 2 × RFD, 4 × RFD and 6 × RFD of this herbicide were added to virgin (previously no trifluralin applied) and cotton field soils (previously trifluralin applied) from a district (Yumurtal?k, Adana) under Mediterranean climate conditions in order to determine their effects on soil microbial activity as measured by carbon mineralization at the different temperature conditions (20 °C, 25 °C and 30 °C). C mineralization of all samples was determined by the CO₂ respiration method over 30 days (20 °C, 25 °C and 30 °C at constant moist). The ratio (%) of carbon mineralization at all doses of cotton field soil at 30 °C was significantly higher than all other field dose–temperature combinations (P < 0.001). Based on these results, trifluralin is used as a carbon source by soil microorganisms. The herbicide trifluralin was degraded completely in the cotton field but a small fraction remained in the virgin field. This result can be explained by the cotton field soil having both more active microbial populations and more microorganisms adapted to the trifluralin applications than the virgin field.     

Effects of nutrient supply and below-ground herbivory by Diaprepes abbreviatus L. (Coleoptera: Curculionidae) on citrus growth and mineral content

Three-year-old citrus trees were grown in the greenhouse to study the effects of fertilizer concentration and root herbivory on plant growth and mineral concentration. In separate experiments, sour orange (Citrus aurantium L.) and Swingle citrumelo (C. paradisi Macf. × Poncirus trifoliate L.) plants were treated with a complete fertilizer diluted to provide 25, 100, 200, or 400 ppm N and grown for 7 weeks with or without Diaprepes abbreviatus L. larvae. Increased fertilizer concentration increased the shoot mass and the shoot:root ratio of both sour orange and Swingle citrumelo. Root herbivory also increased the shoot:root ratio by depressing root growth more than shoot growth. Effects of root herbivory on growth were consistent across the four levels of fertilizer concentration, indicating that tolerance is not a function of nutrient status. For both rootstocks, concentrations of nitrogen in roots and leaves increased with fertilizer concentration, and C:N ratios decreased. In sour orange, root herbivory most strongly affected the concentration of carbon in roots, whereas in Swingle citrumelo, root herbivory most strongly affected leaf nitrogen. In general, herbivory reduced mineral concentrations of roots but the strength, and sometimes the direction, of herbivore effects varied significantly among fertilizer treatments. This research indicates that application of excess, balanced fertilizer is unlikely to offset growth reductions due to root herbivory by D. abbreviatus, and suggests that supplementation of specific nutrients may be of value.     

Time series forecast and soil characteristics-based simple and multivariate linear models for management of Diaprepes abbreviatus root weevil in citrus

Synthesis of insect and soil variable patterns in space and time via process models would be useful for reducing the cost of field monitoring and for achieving improved integrated pest management. During 2001-2003, we monitored the Diaprepes abbreviatus (L.) root weevil population in a flatwoods citrus grove containing a sandy Alfisol and a loamy Mollisol in Hendry County, South Florida. Our objectives were to examine the multi-year correlations of the Diaprepes root weevil with soil characteristics, and to develop a time series model and soil variable-based simple and multivariate linear models for predicting weevil patterns in space and time. Adult weevils were monitored weekly using 100 Tedders traps arranged in a 30×12 m grid. Gravimetric soil water content (SWC), time-domain-reflectory (TDR) volumetric SWC, soil organic matter content (SOM), clay, sand, silt, pH, and Mehlich-I extractable P, K, Ca, Mg, Fe and Mn concentrations were determined for each trap location. Adult weevil density was 0.023±0.018 weevils m⁻² across the 3 years, and the weevil population grew exponentially (R²=0.81). Each year, the weevil was positively related to SWC, TDR, clay, SOM, and soil Mg, Ca and K concentrations (0.32<r<0.65, P<0.05). High weevil density, SWC, SOM, and P, K, Mg and Ca levels matched the Mollisol boundary. The autocorrelation ranges for the weevil and soil variables were within the soil type unit. Time series moving average forecast of Diaprepes weevil development was related to the 3-year mean weevil density monitored in the field (R²=0.88). The SWC, TDR and SOM-based simple and multivariate linear models explained 45% of the variance in the weevil patterns (P<0.001). Time series and soil characteristics-based simple and multivariate linear models suggest a variable rate and less frequent spray for future management of the weevil in citrus production systems.     

Bacterial community structure of nirK-bearing denitrifiers and the development of properties of soils in created mitigation wetlands

We investigated the abundance and genetic heterogeneity of bacterial nitrite reductase genes (nir) and soil structural properties in created and natural freshwater wetlands in the Virginia piedmont. Soil attributes included soil organic matter (SOM), total organic carbon (TOC), total nitrogen (TN), pH, gravimetric soil moisture (GSM), and bulk density (D_b). A subset of soil attributes were analyzed across the sites, using euclidean cluster analysis, resulting in three soil condition (SC) groups of increasing wetland soil development (i.e., SC1 < SC2 < SC3; less to more developed or matured) as measured by accumulation of TOC, TN, the increase of GSM, and the decrease of D_b. There were no difference found in the bacterial community diversity between the groups (p = 0.4). NirK gene copies detected ranged between 3.6 × 10⁴ and 3.4 × 10⁷ copies g⁻¹ soil and were significantly higher in the most developed soil group, SC3, than in the least developed soil group, SC1. However, the gene copies were lowest in SC2 that had a significantly higher soil pH (~6.6) than the other two SC groups (~5.3). The same pattern was found in denitrifying enzyme activity (DEA) on a companion study where DEA was found negatively correlated with soil pH. Gene fragments were amplified and products were screened by terminal restriction fragment length polymorphism (T-RFLP) analysis. Among 146 different T-RFs identified, fourteen were dominant and together made up more than 65% of all detected fragments. While SC groups did not relate to whole nirK communities, most soil properties that identified SC groups did significantly correlate to dominant members of the community.     

Relationships between soil pH and microbial properties in a UK arable soil

Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO₃ concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R² = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R² = 0.80, p < 0.001), biomass ninhydrin-N (R² = 0.90, p < 0.001), organic C (R² = 0.83, p < 0.001) and total N (R² = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO₂ evolution increased as pH increased (R² = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO₂) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO₃) and biotic Co₂ will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.     

Habitat use and activity patterns of larval and adult Cantharis beetles in arable land

Generalist predators play a key role in agriculturally and environmentally sustainable systems of pest control. A detailed knowledge on their ecology, however, is needed to improve management practices to maximize their service of pest control. The present study examines the habitat use and activity patterns of larval and adult Cantharis beetles that are abundant predators in arable land. Laboratory experiments revealed that sixth instar larvae of Cantharis fusca and Cantharis livida significantly preferred high relative humidity levels of 85–90% to lower ones. This can explain their preference for meadows over fields due to the more favorable microclimatic conditions in the former habitats. Surface activity of sixth instar Cantharis larvae during autumn, winter and early spring occurred at soil temperatures above 0 °C. However, no correlation between surface activity and soil temperature, air temperature or relative humidity was found above 0 °C. Catches of sixth instar Cantharis larvae within fenced pitfall traps were higher in a meadow (Mean ± S.D.; 13.8 ± 7.63 individuals m⁻²) than in a field (4.60 ± 2.89 individuals m⁻²). Mark-recapture density estimations for sixth instar larvae indicated mean densities of 25.9 ± 5.63 (field) and 42.8 ± 16.0 individuals m⁻² (meadow). The same pattern was found for adult emergence rates in the field (0.17 ± 0.39 adults m⁻²) and meadow (1.83 ± 1.17 adults m⁻²) as well as for adult densities in the vegetation (field 4.89 ± 3.62 adults 60 m⁻²; meadow 12.5 ± 11.2 adults 60 m⁻²). It is concluded that especially in winter elements that provide plant cover should be incorporated in arable fields to enhance larval cantharid population densities and to attract them from their prime grassland habitats into arable sites.     

Soil moisture effects on infectivity and persistence of the entomopathogenic nematodes Steinernema scarabaei,S. glaseri,Heterorhabditis zealandica,and H. bacteriophora

We tested the effect of soil moisture on the performance of four entomopathogenic nematodes species that have recently shown promise for the control of white grubs, i.e., Heterorhabditis bacteriophora, H. zealandica, Steinernema scarabaei, and S. glaseri. Experiments for all four nematodes were conducted in sandy loam, for S. scarabaei also in loamy sand and silt loam. Infectivity was tested by exposing third-instar Japanese beetle, Popillia japonica, to nematodes in laboratory experiments and determining nematode establishment in the larvae and larval mortality. Nematode infectivity was the highest at moderate soil moistures (−10 to −100 kPa), and tended to be lower in wet (−1 kPa) and moderately dry (−1000 kPa) soil. In dry soil (−3000 kPa), only S. scarabaei showed some activity. S. scarabaei was active from −1 to −3000 kPa in all soil types but the range of highest activity was wider in loamy sand (−1 to −1000 kPa) than in loamy sand and silt loam (−10 to −100 kPa). Persistence was determined in laboratory experiments by baiting nematode-inoculated soil with larvae of the greater wax moth, Galleria mellonella. For both Heterorhabditis spp. persistence was short at −10 kPa, improved slightly at −100 kPa, significantly at −1000 kPa, and was the highest at −3000 kPa. Both Steinernema spp. persisted very well at −10 kPa. However, S. glaseri persistence was the shortest at −10 kPa but did not differ significantly at −100 to −3000 kPa, whereas S. scarabaei persistence was not affected by soil moisture. Our observations concur with previous observations on the effect of soil moisture on entomopathogenic nematodes but also show that moisture ranges for infectivity and persistence vary among species. Differences among species may be based on differences in size and behavioral and physiological adaptations.     

Survival and persistence of genetically modified Sinorhizobium meliloti in soil

Studies were conducted to evaluate the survival and persistence of Sinorhizobium meliloti 104A14 and two acid phosphatase-negative mutants in Kirkland (fine, mixed, thermic Udertic Paleustolls) silt loam soils with various fertility levels, and to assess the impact of inoculation on nodule occupancy and soil microbial community structure in the inoculated alfalfa (Medicago sativa L.) rhizosphere. Recovery of the inoculated strains was 100% (in the order of 10⁸ cells g⁻¹ soil) immediately following inoculation to soils, but decreased from 10⁸ cells g⁻¹ soil to undetectable levels in a nutrient-poor soil within 32 days. In a nutrient-rich soil, approximately 2–3% (4.7–7.43×10⁶ cells g⁻¹ soil) of the mutants and 23% (5.84×10⁷ cells g⁻¹ soil) of the wild-type inocula persisted for more than 64 days. Survivability and persistence of the wild-type S. meliloti were significantly greater than that of the genetically modified acid phosphatase negative mutants in all the soils tested. The persistence and nodule occupancy of the introduced S. meliloti in sterile and non-sterile soils were also tested for two repeated alfalfa growth periods in the same plant growth units, with a 1 month interval in between and no additional inoculation for the second period. Nodule occupancy of the introduced S. meliloti in non-sterile soils ranged from 30 to 60% for the first period and 85 to 100% for the second period. Our results suggest that survival and persistence of S. meliloti was enhanced by alfalfa cultivation and increased soil fertility, but impaired by mutation of acid phosphatase genes regardless of phosphorus nutritional levels. Moreover, inoculation with genetically modified S. meliloti strain 104A14 promoted indigenous bacterial growth in soil (increased bacterial population from 1.4×10⁶ to 4.3×10⁶ cells g⁻¹ soil), but not the growth of fungi and yeast. However, inoculation of the wild-type S. meliloti or genetically modified mutants did not result in significant changes in microbial community structure as indicated by EP indices and ratios of r/K strategists.     

Impact of carbon-rich dairy factory effluent on growth of perennial ryegrass (Lolium perenne) and soil microorganisms

A pot experiment was conducted to investigate the impact of high carbon dairy factory effluent application on the growth of perennial ryegrass (Lolium perenne L.), plant nutrient uptake, soil microbial biomass carbon and nitrogen, populations of soil-microorganisms, root colonising fungi and the microbial functional diversity. The effluent was added at rates of 0, 100,000, 200,000 and 300,000 l ha^–1. These rates are equivalent to 0, × 1, × 2 and × 3 normal field application rates. The added effluent contained (g l^–1), C; 19.42, total P; 0.65; S, 0.75, K; 1.33, Na; 4.55, Mg; 0.11, NH₄; 0.073, total N; 0.073 and had a pH of 4.33. Replicate pots (incubated in a controlled-environment room at 20 °C, with 16 h light/8 h dark) were harvested at 32, 61, and 130 days after setting up of the experiment. In the first sampling, shoot dry matter levels declined significantly (P < 0.01) with increased effluent. By the third sampling the trend was reversed with treated pots having greater amounts of shoot dry matter. The initial depression of growth was possibly due to a combination of factors including excess levels of available carbon (C) for microbes leading to immobilisation of nutrients, particularly nitrogen (N) and sulphur (S). Shoot N and S concentrations were lower (P < 0.001) and the phosphorus concentrations were higher in effluent-treated samples. Soil microbial biomass-C (480 and 770 μg g⁻¹ of biomass C in untreated and treated soil, respectively) and microbial-N (81 and 123 μg g^–1 of microbial-N in untreated and treated soil, respectively) were significantly (P < 0.001) greater in effluent-treated pots at all times. Populations of total culturable bacteria were higher (P < 0.01) in the treated pots in the first sample (log₁₀ populations g^–1 were 7.3 in untreated pots compared to 8.0 averaged across three treatments) but there were no differences in the subsequent two samples. Effluent also increased yeast populations (log₁₀ numbers g^–1 were 0.6 in untreated pots and 3.1 in treated pots averaged across treatments and times P < 0.01) at all three sampling times. The Shannon-Weiner Diversity Index of root fungi decreased with increasing effluent application (P < 0.01) while the species richness decreased with effluent as well as with time (P < 0.1). Potential root pathogens Fusarium oxysporum, total Fusarium spp. and Pythium spp. significantly increased (P < 0.05) in treated samples but in the final sampling, Codinaea fertilis significantly (P < 0.05) decreased with effluent treatment. The microbial functional diversity pattern and the average well colour development (AWCD) in soil were significantly changed by the effluent application but effects were not detectable after 130 days.     

Improved soil structure and citrus growth after inoculation with three arbuscular mycorrhizal fungi under drought stress

In a controlled potted experiment, citrus (Poncirus trifoliata) seedlings were inoculated with three species of arbuscular mycorrhizal (AM) fungi, Glomus mosseae, G. versiforme or G. diaphanum. Two soil-water levels (ample water, −0.10 MPa; drought stress, −0.44 MPa) were applied to the pots 4 months after transplantation. Eighty days after water treatments, the soils and the citrus seedlings were well colonized by the three AM fungi. Mycorrhizal fungus inoculation improved plant biomass regardless of soil-water status but decreased the concentrations of hot water-extractable and hydrolyzable carbohydrates of soils. Mycorrhizal soils exhibited higher Bradford-reactive soil protein concentrations than non-mycorrhizal soils. Mycorrhizas enhanced >2 mm, 1–2 mm and >0.25 mm water-stable aggregate fractions but reduced 0.25–0.5 mm water-stable aggregates. Peroxidase activity was higher in AM than in non-AM soils whether drought stressed or not, whereas catalase activity was lower in AM than non-AM soils. Drought stress and AM fungus inoculation did not affect polyphenol oxidase activity of soils. A positive correlation between the Bradford-reactive soil protein concentrations, soil hyphal length densities, and water-stable aggregates (only >2 mm, 1–2 mm and >0.25 mm) suggests beneficial effects of the AM symbiosis on soil structure. It concluded that AM fungus colonization enhanced plant growth under drought stress indirectly through affecting the soil moisture retention via glomalin's effect on soil water-stable aggregates, although direct mineral nutritional effects could not be excluded.     

Effects of inorganic fertilizer and manure on soil archaeal abundance at two experimental farms during three consecutive rotation-cropping seasons

Soil archaeal population dynamics at two experimental sites of the same clay-loam type in Ottawa and Woodslee, Ontario, were investigated to determine fertilizer and manure effects following their different long-term crop rotation and fertilization schemes. Phylogenetic analysis of cloned soil archaeal 16S rRNA gene libraries of both sites identified them with group 1.1b of Thaumarchaeota. The gene population dynamics subtly varied in the order of 10⁷ copies g⁻¹ soil when monitored by quantitative real-time PCR during three growing seasons (2007–2009). In Ottawa, where plots were amended with dairy-farm manure, soil thaumarchaeal gene abundance was double of the unamended plots. At the Woodslee N-P-K-fertilized plots, it remained at least 30% fewer than that of the unfertilized ones. These cultivated plots showed soil carbon limitation while the fertilized ones were low in soil pH (ca. 5.5). Surface soils from an unfertilized sod plot and an adjacent deciduous forest had higher total carbon content (C:N ratio of 9 and 11, respectively). Their thaumarchaeal gene abundance varied up to 4.8 × 10⁷ and 7.0 × 10⁷ copies g⁻¹ soil, respectively. The former value was also attained at the manure-amended plots in Ottawa, where the C:N ratio was just below 10. Where soil pH was above 6.0, there was a weak and positive correlation between soil total C and the estimated gene abundance. Such gene population dynamics consistently demonstrated the stimulating and suppressive effects of dairy-farm manure (Ottawa site) and inorganic fertilizers (Woodslee site), respectively, on soil thaumarchaea. At both sites archaeal amoA and 16S rRNA gene abundance were similarly affected. Archaeal amoA gene abundance also outnumbered bacterial amoA abundance, suggesting that ammonia-oxidizing archaea might be dominant in these soils. Only minor crop effects on gene population dynamics were detected.     

Earthworm communities and soil properties in shaded coffee plantations with and without application of glyphosate

In central Veracruz, Mexico, many coffee plantations are managed using agrochemicals for weed control, with glyphosate-based herbicides (GBH) the most commonly used. To date, however, no studies in this region have characterized the soil biological and physicochemical properties in coffee plantations under such glyphosate application. In this study, earthworms were used as bioindicator organisms by measuring differences in the earthworm community in plots within shaded coffee plantations, with and without repeated applications of glyphosate. Differences in earthworm-induced soil processes, such as water infiltration rates, potential net carbon mineralization rates and soil physicochemical properties were also evaluated. Eight plots were selected in shaded coffee plantations; four had received regular applications of GBH over the preceding 22 years, while the other four had received no herbicides over the preceding 7 years. The earthworm species found in plots with no GBH treatment were Pontoscolex corethrurus (99%) and Amynthas corticis (1%), while A. corticis was absent in plots that had been treated with GBH. Significant differences (P < 0.01) in earthworm density (168 ± 16 and 353 ± 37 ind m⁻²) and biomass (22.7 ± 1.1 and 45.4 ± 6.9 g m⁻²) were observed in soils with and without GBH, respectively. No significant difference (P = 0.08) was observed in the water infiltration rate (2 × 10⁻⁴ ± 4 × 10⁻⁵ and 4 × 10⁻⁴ ± 1 × 10⁻⁴ cm s⁻¹ with and without GBH, respectively). Soil carbon flow was greater in plots with GBH (76 ± 7 μg dry soil⁻¹ d⁻¹) than in those without GBH (62 ± 1 μg dry soil⁻¹ d⁻¹, P < 0.005). Significant differences (P < 0.05) were found in pH and in the clay, silt and Ca content of the soil. Our findings indicated reduced species number, density and biomass of earthworms, and increased net carbon mineralization rate in plots with GBH. The plots managed with glyphosate presented a negative effect on the earthworm parameters measured, and we conclude that the earthworms therefore acted as indicators of perturbation. It is also possible that this effect could be due to factors unrelated to the glyphosate that were not considered in this study, such as chemical fertilization or legume litter spatial variability, among others.     

Carbon loss by sclerotia of Sclerotium rolfsii under the influence of soil pH,temperature and matric potential and its effect on sclerotial germination and virulence

Germinability and virulence of sclerotia of Sclerotium rolfsii were assessed after 50 days of exposure of ¹⁴C-labeled sclerotia to soil at 0, −5 and −15 kPa and pH 6.9, or to soil at 15, 25 or 30 °C, pH 5 or 8 and −1 kPa. Evolution of ¹⁴CO₂ accounted for the greatest share of endogenous carbon loss from sclerotia under all soil conditions, except in water-saturated soil (0 kPa), in which sclerotial exudates contributed the major share of carbon loss. Total evolution of ¹⁴CO₂ from sclerotia in soil at −15 kPa (42.4% of total ¹⁴C) and at −5 kPa (38%) was significantly higher than at 0 kPa (23.8%). Evolution of ¹⁴CO₂ in soil at 25 or 30 °C was more rapid than at 15 °C with regardless of pH. Loss of endogenous carbon by sclerotia was the greater after 50 days of exposure to soil at 0 kPa, or at 25 or 30 °C and pH 8, than at other soil conditions. Sclerotia exposed to water-saturated soil (0 kPa) showed a more rapid decline in nutrient independent germinability, viability and virulence, than to those exposed to −5 or −15 kPa. Sclerotia became dependent on nutrient for germination and lost viability and virulence within 30–40 days in soil at 25 or 30 °C, pH 8. However, more than 60% of sclerotia retained viability in soil at 15 °C regardless of pH, even after 50 days. Radish shoot growth was increased significantly by the sclerotia that had been exposed to soil at 0 kPa, or to soil at 25 or 30 °C and pH 8 for 50 days. In conclusion, carbon loss by sclerotia during incubation on soil at different pH levels, temperatures and water potentials was inversely correlated with sclerotial ability to infect radish seedlings. The relationship between carbon loss by sclerotia and radish shoot length was positive.     

Effects of arbuscular mycorrhizal inoculation and phosphorus supply on the growth and nutrient uptake of Kandelia obovata (Sheue,Liu & Yong) seedlings in autoclaved soil

This study evaluated the interactive effect of arbuscular mycorrhizal fungi (AMF) inoculation and exogenous phosphorus supply on soil phosphotases, plant growth, and nutrient uptake of Kandelia obovata (Sheue, Liu & Yong). We aimed to explore the ecophysiological function of AMF in mangrove wetland ecosystems, and to clarify the possible survival mechanism of mangrove species against nutrient deficiency. K. obovata seedlings with or without AMF inoculation (mixed mangrove AMF), were cultivated for six months in autoclaved sediment medium which was supplemented with KH₂PO₄ (0, 15, 30, 60, 120 mg kg−¹). Then the plant growth, nitrogen and phosphorus content, root vitality, AMF colonization and soil phosphatase activity were analyzed. The inoculated AMF successfully infected K. obovata roots, developed intercellular hyphae, arbuscular (Arum-type), and vesicle structures. Arbuscular mycorrhizal fungi colonization ranged from 9.04 to 24.48%, with the highest value observed under 30 and 60 mg kg⁻¹ P treatments. Soil P supply, in the form of KH₂PO₄, significantly promoted the height and biomass of K. obovata, enhanced root vitality and P uptake, while partially inhibiting soil acid (ACP) and alkaline phosphotase (ALP) activities. Without enhancing plant height, the biomass, root vitality and P uptake were further increased when inoculated with AMF, and the reduction on ACP and ALP activities were alleviated. Phosphorus supply resulted in the decrease of leaf N–P ratio in K. obovata, and AMF inoculation strengthened the reduction, thus alleviating P limitation in plant growth. Arbuscular mycorrhizal fungi inoculation and adequate P supply (30 mg kg⁻¹ KH₂PO₄) enhanced root vitality, maintained soil ACP and ALP activities, increased plant N and P uptake, and resulted in greater biomass of K. obovata. Mutualistic symbiosis with AMF could explain the survival strategies of mangrove plants under a stressed environment (waterlogging and nutrient limitation) from a new perspective.     

Organic soil amendments: Impacts on snap bean common root rot (Aphanomyes euteiches) and soil quality

Common root rot (causal agent Aphanomyes euteiches) is a major disease of commercially grown snap bean (Phaseolus vulgaris L.). Organic amendments hold potential to suppress plant diseases, which may be due to changes in soil biology and other soil properties. The objective of this study was to determine the potential of paper-mill residual by-products to suppress common root rot of snap bean in relation to soil properties. The study was done on soil (Plainfield sandy loam, Hancock, WI) from a field trial comparing annual applications of fresh paper-mill residuals (0, 22 or 33 dry Mg ha⁻¹) or composted paper-mill residuals (0, 38 or 78 dry Mg ha⁻¹). Soil was removed from each treatment that had been in place 3 years in April 2001 (1 year after last amendment) and on September 2001 (4 months after last amendment) and brought to the laboratory. Soils were incubated at field moisture content (25 °C) and periodically bioassayed with bean seedlings (9, 44, 84, 106, 137, 225 or 270 days after removal from the field) for snap bean root rot. Soils were sampled on the same day as the root rot bioassay and assayed for β-glucosidase, arylsulfatase and fluorescein diacetate hydrolysis activities (FDA), microbial biomass-C (MB_C) (by chloroform fumigation), water stable aggregation, and total C. There were large differences in snap bean root rot incidence between the field amendment treatments. The unamended field soil had high levels of disease incidence throughout the experiment but disease incidence tended to decrease over time in amended soils. The disease was suppressed by both fresh and composted paper-mill residuals, but the composted residuals at high rates had the lowest disease incidence (<40%) and produced healthiest plants. Root rot severity was strongly negatively correlated with total C (0.001 ≤ p) and arylsulfatase activity (0.001 ≤ p). β-Glucosidase activity was negatively correlated (0.05 ≤ p) with disease severity while soil MB_C showed inconsistent negative correlations with disease severity over the incubation sampling periods. Arylsulfatase activity was the best indicator for reflecting disease suppression. The amendments improved soil quality, which was exemplified by improved aggregation.     

The fate and toxicity of the flavonoids naringenin and formononetin in soil

The flavonoid class of plant secondary metabolites play a multifunctional role in below-ground plant–microbe interactions with their best known function as signals in the nitrogen fixing legume–rhizobia symbiosis. Flavonoids enter rhizosphere soil as a result of root exudation and senescence but little is known about their subsequent fate or impacts on microbial activity. Therefore, the present study examined the sorptive behaviour, biodegradation and impact on dehydrogenase activity (as determined by iodonitrotetrazolium chloride reduction) of the flavonoids naringenin and formononetin in soil. Organic carbon normalised partition coefficients, log K_oc, of 3.12 (formononetin) and 3.19 (naringenin) were estimated from sorption isotherms and, after comparison with literature log K_oc values for compounds whose soil behaviour is better characterised, the test flavonoids were deemed to be moderately sorbed. Naringenin (spiked at 50 μg g^?1) was biodegraded without a detectable lag phase with concentrations reduced to 0.13±0.01 μg g^?1 at the end of the 96 h time course. Biodegradation of formononetin proceeded after a lag phase of ～24 h with concentrations reduced to 4.5±1% of the sterile control after 72 h. Most probable number (MPN) analysis revealed that prior to the addition of flavonoids, the soil contained 5.4×10⁶ MPN g^?1 (naringenin) and 7.9×10⁵ MPN g^?1 (formononetin) catabolic microbes. Formononetin concentration had no significant (p>0.05) effect on soil dehydrogenase activity, whereas naringenin concentration had an overall but non-systematic impact (p=0.045). These results are discussed with reference to likely total and bioavailable concentrations of flavonoids experienced by microbes in the rhizosphere.     

Arbuscular mycorrhizal abundance in contaminated soils around a zinc and lead deposit

In order to study the variations in spore abundance and root colonization parameters of arbuscular mycorrhizal (AM) fungi in a naturally heavy metals polluted site and their relationships with soil properties, 35 plots in the Anguran Zn and Pb mining region were selected along a transect from the mine to 4500 m away. Within each plot, a composite sample of root and rhizospheric soil from a dominant indigenous plant was collected. The soil samples were analyzed for their physico-chemical characteristics. Spores were extracted, counted and identified at genus level. The roots were examined for colonization, arbuscular abundance, mycorrhizal frequency and intensity. Along the transect, the total and available (DTPA-extractable) concentration of Zn decreased from 6472 to 45 mg kg⁻¹ and 75 to 5 mg kg⁻¹, respectively. For Pb the values varied from 5203 to 0 mg kg⁻¹ and 32 to 0 mg kg⁻¹, respectively. In parallel, root colonization rate in the dominant native plants (except Alyssum sp.) varied from 35% to 85% and the spore numbers from 80 to 1306 per 200 g dry soil along the transect. Spores of Glomus were abundantly found in all plots as dominant, while Acaulospora spores were observed only in some moderately polluted and in control plots. AM fungal propagules never disappeared completely even in soils with the highest rates of both heavy metals. Spore numbers were more affected by Zn and Pb concentrations than root colonization. The variations of AM fungi propagules were better related to available than to total concentration of both metals. Spore numbers were positively correlated with mycorrhizal colonization parameters, particularly with arbuscular abundance.     

An outline of soil nematode succession on abandoned fields in South Bohemia

Secondary succession of nematodes was studied in 1–48-year-old abandoned fields on cambisols in South Bohemia, Czech Republic, and compared with cultivated field and sub-climax oak forests. Bacterivores were the predominant group in the cultivated field whereas in forests root-fungal feeders (mainly Filenchus) were almost as abundant as bacterivores. The total abundance of nematodes in the cultivated field averaged 868 × 10³ ind m⁻². During the first three years of succession the abundance practically did not change (775 × 10³ ind m⁻²), the fauna was still similar to that in cultivated field but the biomass increased mainly due to Aporcelaimellus. Then the abundance increased up to 3731 × 10³ ind m⁻² in 7–8-year-old abandoned fields, plant parasites (Helicotylenchus) dominated and the fungal-based decomposition channel was activated. Later the abundance stabilised at between 1086 and 1478 × 10³ ind m⁻² in 13–25-year-old successional meadow stages with high population densities of omnivores and predators. The total abundance of nematodes was low in the 12–13-year-old willow shrub stage (594 × 10³ ind m⁻²), increased in the 35–48-year-old birch shrub stage (1760 × 10³ ind m⁻²) and the nematode fauna developed towards a forest community. The diversity and maturity of nematode communities generally increased with the age of abandoned fields but the highest values were in meadow stages (81–113 species, 57–68 genera, MI 2.73–3.30). The development of meadow arrested succession towards forests or diverted succession towards a waterlogged ecosystem. The succession of nematodes was influenced by the method of field abandonment (bare soil vs. legume cover, mowing) that affected the formation of either a shrub or meadow stage, and by the soil water status. The composition of the nematode fauna indicated that the soil food web could recover faster from agricultural disturbance under successive meadows than under shrubs.     

Turnover of low molecular weight dissolved organic C (DOC) and microbial C exhibit different temperature sensitivities in Arctic tundra soils

Polar ecosystems are currently experiencing some of the fastest rates of climate warming. An increase in soil temperature in High Arctic regions may stimulate soil permafrost melting and microbial activity, thereby accelerating losses of greenhouse gases. It is therefore important to understand the factors regulating the rates of C turnover in polar soils. Consequently, our aims were to: (1) assess the concentration of low molecular weight (MW) dissolved organic carbon (DOC) in soil, (2) to investigate the temperature-dependent turnover of specific low MW compounds, and (3) to analyse the influence of substrate concentration on C cycling. Microbial mineralisation of labile low MW DOC in two High Arctic tundra soils was investigated using soil solutions spiked with either ¹⁴C-labelled glucose or amino acids. Spiked solutions were added to the top- and sub-soil from two ecosystem types (lichen and Carex dominated tundra), maintained at three temperatures (4–20 °C), and their microbial mineralisation kinetics monitored. ¹⁴CO₂ evolution from the tundra soils in response to ¹⁴C-glucose and -amino acid addition could best be described by a double first order exponential kinetic equation with rate constants k₁ and k₂. Both forms of DOC had a short half-life (t_1/2) in the pool of microbial respiratory substrate (t_1/2 = 1.07 ± 0.10 h for glucose and 1.63 ± 0.14 h for amino acids; exponential coefficient k₁ = 0.93 ± 0.07 and 0.64 ± 0.06 h^?1 respectively) whilst the second phase of mineralisation, assumed to be C that had entered the microbial biomass, was much slower (average k₂ = 1.30 × 10^?3 ± 0.49 × 10^?4 h^?1). Temperature had little effect on the rate of mineralisation of ¹⁴C used directly as respiratory substrate. In contrast, the turnover rate of the ¹⁴C immobilized in the microbial biomass prior to mineralisation was temperature sensitive (k₂ values of 0.99 × 10^?3 h^?1 and 1.66 × 10^?3 h^?1 at 4 and 20 °C respectively). Concentration-dependent glucose and amino acid mineralisation kinetics of glucose and amino acids (0–10 mM) were best described using Michaelis–Menten kinetics; there was a low affinity for both C substrates by the microbial community (K_m = 4.07 ± 0.41 mM, V_max = 0.027 ± 0.005 mmol kg^?1 h^?1). In conclusion, our results suggest that in these C limiting environments the flux of labile, low MW DOC through the soil solution is extremely rapid and relatively insensitive to temperature. In contrast, the turnover of C incorporated into higher molecular weight microbial C pools appears to show greater temperature sensitivity.