Determination of root and microbial contributions to the CO<Subscript>2</Subscript> emission from soil by the substrate-induced respiration method

The contributions of root and microbial respiration to the CO₂ emission from the surface of gray forest and soddy-podzolic soils under meadow and forest vegetation were determined in field and laboratory experiments. In the field, a new modification of the substrate-induced respiration (SIR) method was applied. According to this method, the contribution of root respiration was estimated at 41–50% for meadow cenoses and 33% for forest cenoses; similar values were obtained in the course of separate incubation of roots and soil in laboratory (42–57% and 29–32%, respectively) and with the use of the laboratory version of the SIR method (35–40% and 21–31%, respectively). The analysis of difference between the values of root respiration and microbial respiration obtained by the field and laboratory methods for the same experimental plots and the comparison of advantages and disadvantages of these methods made it possible to outline the ways for the further improvement of the field version of the SIR method.     

The fungal and bacterial biomass (selective inhibition) and the production of CO<Subscript>2</Subscript> and N<Subscript>2</Subscript>O by soddy-podzolic soils of postagrogenic biogeocenoses

In the humus horizon of soddy-podzolic soils of postagrogenic cenoses and primary forests, the contributions of the fungi and bacteria were determined by the selective inhibition of the substrate-induced respiration (SIR) by antibiotics; the basal (microbial) respiration and the net-produced nitrous oxide (N₂O) were also determined. The procedure of the SIR separation using antibiotics (cycloheximide and streptomycin) into the fungal and bacterial components was optimized. It was shown that the fungi: bacteria ratio was 1.58, 2.04, 1.55, 1.39, 2.09, and 1.86 for the cropland, fallow, and different-aged forests (20, 45, 90, and 450 years), respectively. The fungal and bacterial production of CO₂ in the primary forest soil was higher than in the cropland by 6.3 and 11.4 times, respectively. The production of N₂O in the soils of the primary and secondary (90-year-old) forests (3 and 7 ng N-N₂O/g soil per hour, respectively) was 2–13 times lower than in the postagrogenic cenoses, where low values were also found for the microbial biomass carbon (C_mic), its components (the C_mic-bacteria and C_mic-fungi), and the portion of C_mic in the organic carbon of the soil. A conclusion was drawn about the misbalance of the microbial processes in the overgrown cropland accompanied by the increased production of N₂O by the soil during its enrichment with an organic substrate (glucose).     

Effects of biochar addition on N<Subscript>2</Subscript>O and CO<Subscript>2</Subscript> emissions from two paddy soils

Impacts of biochar addition on nitrous oxide (N₂O) and carbon dioxide (CO₂) emissions from paddy soils are not well documented. Here, we have hypothesized that N₂O emissions from paddy soils could be depressed by biochar incorporation during the upland crop season without any effect on CO₂ emissions. Therefore, we have carried out the 60-day aerobic incubation experiment to investigate the influences of rice husk biochar incorporation (50 t ha⁻¹) into two typical paddy soils with or without nitrogen (N) fertilizer on N₂O and CO₂ evolution from soil. Biochar addition significantly decreased N₂O emissions during the 60-day period by 73.1% as an average value while the inhibition ranged from 51.4% to 93.5% (P < 0.05–0.01) in terms of cumulative emissions. Significant interactions were observed between biochar, N fertilizer, and soil type indicating that the effect of biochar addition on N₂O emissions was influenced by soil type. Moreover, biochar addition did not increase CO₂ emissions from both paddy soils (P > 0.05) in terms of cumulative emissions. Therefore, biochar can be added to paddy fields during the upland crop growing season to mitigate N₂O evolution and thus global warming.     

Carbon turnover in the rhizosphere under continuous plant labeling with <Superscript>13</Superscript>CO<Subscript>2</Subscript>: Partitioning of root,microbial, and rhizomicrobial respiration

The input of labeled C into the pool of soil organic matter, the CO₂ fluxes from the soil, and the contribution of root and microbial respiration to the CO₂ emission were studied in a greenhouse experiment with continuous labeling of oat plants with ¹³CO₂ using the method of the natural ¹³C abundance in the air. The carbon of the microbial biomass composed 56 and 39% of the total amounts of ¹³C photoassimilates in the rhizosphere and in the bulk soil, respectively. The contribution of root respiration to the CO₂ emission from the soil reached 61–92%, including 4–23% of the rhizomicrobial respiration. The contribution of the microbial respiration to the total CO₂ emission from the soil varied from 8 to 39%. The soil organic matter served as the major carbon-containing substrate for microorganisms in the bulk soil and in the rhizosphere: 81–91% of the total amount of carbon involved in the microbial metabolism was derived from the soil organic matter.     

Seasonal Dynamics of Soil CO<Subscript>2</Subscript> Concentration and CO<Subscript>2</Subscript> Fluxes from the Soil of the Former Lake Texcoco,Mexico

Seasonal changes of the soil CO₂ concentration and the rate of CO₂ fluxes emission from the soil formed on the sediments of the former Lake Texcoco, which occupied a significant part of the Mexico Valley until the mid-17th century, were studied. The soils (Fluvic Endogleyic Phaeozems) were characterized by a low CO₂ fluxes rate, which is related to their high alkalinity. The mean values of soil respiration were 6.0–14.1 mg C/(m² h) depending on vegetation type, which corresponds to 60–157 g C/(m² yr). The contribution of plants to the CO₂ fluxes insignificantly varied by seasons and depended on the species composition of vegetation. The soil CO₂ concentration and soil respiration in eucalypt (Eucalyptus globulus Labill.) plantation were two times higher than those in the grass–subshrub area, the ground cover of which consisted of Distichlis spicata (L.) Greene and Suaeda nigra (Raf.) J.F. Macbr. species. This can be related to the significant volumes of gas production during the respiration of eucalypt roots and associated rhizosphere community. The contribution of the root systems of grass cover to the soil CO₂ fluxes in eucalypt plantation slightly varied within the year and was equal to 24% on the average. In the grass–subshrub area, its value varied from 41% in the cold season to 60% in the warm season. The spatial variability of soil CO₂ concentration and its flux rate to the atmosphere was due to the differences in plant species composition and hydrothermal conditions, and their temporal trend was closely related to the seasonal accumulation of plant biomass and soil temperature.     

Reducing CH<Subscript>4</Subscript> and CO<Subscript>2</Subscript> emissions from waterlogged paddy soil with biochar

Purpose  

A potential means to diminish increasing levels of CO₂ in the atmosphere is the use of pyrolysis to convert biomass into biochar, which stabilizes the carbon (C) that is then applied to soil. Before biochar can be used on a large scale, especially in agricultural soils, its effects on the soil system need to be assessed. This is especially important in rice paddy soils that release large amounts of greenhouse gases to the atmosphere.     

Assessing the potential of using biochar in mine rehabilitation under elevated atmospheric CO<Subscript>2</Subscript> concentration

Purpose

Re-establishment of soil nitrogen (N) capital is a priority in mine rehabilitation. We aimed to evaluate the effects of biochar addition on improving mine spoil N pools and the influence of elevated CO₂ concentration on mine rehabilitation.

Materials and methods

We assessed the effects of pinewood biochar, produced at three temperatures (650, 750 and 850 °C, referred as B₆₅₀, B₇₅₀ and B₈₅₀, respectively), on mine spoil total N concentrations with five different plant species, including a tree species (Eucalyptus crebra), N-fixing shrubs (Acacia floribunda and Allocasuarina littoralis) and C₃ and C₄ grasses (Austrodanthonia tenuior and Themeda australis) incubated at ambient (400 μL L^?1) and elevated (700 μL L^?1) atmospheric CO₂ concentrations, as well as the effects of elevated CO₂ on mine rehabilitation.

Results and discussion

Soil total N significantly improved following biochar incorporation under all plant species (P < 0.05) except for T. Australis. E. crebra had the highest soil total N (0.197%, 0.198% and 0.212% for B₆₅₀, B₇₅₀ and B₈₅₀, respectively). Different from the negligible influence of elevated CO₂ on soil properties under the grasses and the N-fixing shrubs, elevated CO₂ significantly increased soil water and hot water extractable organic C (WEOC and HWEOC, respectively) and decreased total C under E. crebra, indicating that the nutrient demands were not met.

Conclusions

Biochar addition showed the potential in mine rehabilitation in terms of improving soil N pool, especially with E. crebra. However, it would be more difficulty to rehabilitate mine spoils in future with the rising atmospheric CO₂ concentration.

     

Effect of CO<Subscript>2</Subscript> on nitrification and immobilization of NH<Subscript>4</Subscript><Superscript>+</Superscript>-N

A laboratory incubation experiment was conducted to demonstrate that reduced availability of CO₂ may be an important factor limiting nitrification. Soil samples amended with wheat straw (0%, 0.1% and 0.2%) and (¹⁵NH₄)₂SO₄ (200 mg N kg^–1 soil, 2.213 atom% ¹⁵N excess) were incubated at 30±2°C for 20 days with or without the arrangement for trapping CO₂ resulting from the decomposition of organic matter. Nitrification (as determined by the disappearance of NH₄⁺ and accumulation of NO₃^–) was found to be highly sensitive to available CO₂ decreasing significantly when CO₂ was trapped in alkali solution and increasing substantially when the amount of CO₂ in the soil atmosphere increased due to the decomposition of added wheat straw. The co-efficient of correlation between NH₄⁺-N and NO₃^–-N content of soil was highly significant (r =0.99). During incubation, 0.1–78% of the applied NH₄⁺ was recovered as NO₃^– at different incubation intervals. Amendment of soil with wheat straw significantly increased NH₄⁺ immobilization. From 1.6% to 4.5% of the applied N was unaccounted for and was due to N losses. The results of the study suggest that decreased availability of CO₂ will limit the process of nitrification during soil incubations involving trapping of CO₂ (in closed vessels) or its removal from the stream of air passing over the incubated soil (in open-ended systems).     

Production of CO<Subscript>2</Subscript> by surface and buried soils of the steppe zone under native and moistened conditions

Modern light chestnut and chestnut soils and their analogues buried under steppe kurgans in the southeastern part of the Russian Plain were studied in order to determine the rates of the CO₂ production by these soils under the native (with the natural moisture content) and moistened (60% of the total water capacity) conditions. It was found that the rates of the CO₂ production by the soil samples in the native state are relatively close to one another and vary from 0.3 to 1.4 μg of C/100 g of soil/h. The rates of the CO₂ production in the moistened state increased by two orders of magnitude for the modern surface soils and by an order of magnitude for the buried soils.     

Daily and seasonal dynamics of CO<Subscript>2</Subscript> fluxes from soils under different stands of monsoon tropical forest

The analysis of daily, seasonal, and annual dynamics of CO₂ emission from soils under different stands of monsoon tropical tall-tree forest was performed on the basis of field observations conducted at the Russian-Vietnamese Tropical Research and Technology Center of the Russian Academy of Sciences. Under a tropical climate, the main factors responsible for the rate of carbon dioxide emission from the soils are shown to be the soil type and the topographic position of the area studied along with the type of vegetation. Depending on these factors, the rate of CO₂ emission from the soils was 65–178 mg C/(m² h) during the dry season and 123–259 mg C/(m² h) during the wet season. The daily dynamics of CO₂ emissions from the soils of the tropical zone was weakly pronounced in both the wet and the dry season owing to the insignificant diurnal fluctuations of soil temperature. The investigations carried out allowed making an expert evaluation of the annual CO₂ fluxes from the soils under different stands of monsoon tropical tall-tree forest in southern Vietnam. They amounted to 900–2000 g C/(m² yr) depending on the forest type.     

CO<Subscript>2</Subscript> emission from the surface of dark gray forest soils of the forest steppe and sandy soddy-podzolic soils of the southern taiga

Studies performed on dark gray loamy forest soils in an oak forest in the southern forest steppe and on sandy soddy-podzolic soil in a pine forest in the southern taiga showed that the annual emission of CO₂ from the soil surface in the pine forest was 16.3 t CO₂/ha, including 10.1 t CO₂/ha due to root respiration and 6.2 t CO₂/ha due to soil microbial respiration. In the southern forest steppe, the corresponding values were 17.8 t CO₂/ha due to root respiration at the optimum water content (20%) and 28.3 t CO₂/ha due to soil microbial respiration. With the insufficient soil water content (12.5%), 10.3 and 17.8 t CO₂/ha were due to root respiration and soil microbial respiration, respectively. Under strong drought conditions (water content of 10%), the emission of CO₂ decreased to 8.2 and 16.3 t/ha due to root respiration and soil microbial respiration, respectively.     

N<Subscript>2</Subscript>O,CO<Subscript>2</Subscript>, Production,and C Sequestration in Vineyards: a Review

Even if it is less polluting than other farm sectors, grape growing management has to adopt measures to mitigate greenhouse gas (GHG) emissions and to preserve the quality of grapevine by-products. In viticulture, by land and crop management, GHG emissions can be reduced through adjusting methods of tillage, fertilizing, harvesting, irrigation, vineyard maintenance, electricity, natural gas, and transport until wine marketing, etc. Besides CO₂, nitrous oxide (N₂O) and methane (CH₄), released from fertilizers and waste/wastewater management are produced in vineyards. As the main GHG in vineyards, N₂O can have the same harmful action like large quantities of CO₂. Carbon can be found in grape leaves, shoots, and even in fruit pulp, roots, canes, trunk, or soil organic matter. C sequestration in soil by using less tillage and tractor passing is one of the efficient methods to reduce GHG in vineyards, with the inconvenience that many years are needed for detectable changes. In the last decades, among other methods, cover crops have been used as one of the most efficient way to reduce GHG emissions and increase fertility in vineyards. Even if we analyze many references, there are still limited information on practical methods in reducing emissions of greenhouse gases in viticulture. The aim of the paper is to review the main GHG emissions produced in vineyards and the approached methods for their reduction, in order to maintain the quality of grapes and other by-products.     

Soil N<Subscript>2</Subscript>O emissions and N<Subscript>2</Subscript>O/(N<Subscript>2</Subscript>O+N<Subscript>2</Subscript>) ratio as affected by different fertilization practices and soil moisture

The objective of this work was to evaluate the effect of the chemical nature and application frequency of N fertilizers at different moisture contents on soil N₂O emissions and N₂O/(N₂O+N₂) ratio. The research was based on five fertilization treatments: unfertilized control, a single application of 80 kg ha⁻¹ N-urea, five split applications of 16 kg ha⁻¹ N-urea, a single application of 80 kg ha⁻¹ N–KNO₃, five split applications of 16 kg ha⁻¹ N–KNO₃. Cumulative N₂O emissions for 22 days were unaffected by fertilization treatments at 32% water-filled pore space (WFPS). At 100% and 120% WFPS, cumulative N₂O emissions were highest from soil fertilized with KNO₃. The split application of N fertilizers decreased N₂O emissions compared to a single initial application only when KNO₃ was applied to a saturated soil, at 100% WFPS. Emissions of N₂O were very low after the application of urea, similar to those found at unfertilized soil. Average N₂O/(N₂O+N₂) ratio values were significantly affected by moisture levels (p = 0.015), being the lowest at 120% WFPS. The N₂O/(N₂O+N₂) ratio averaged 0.2 in unfertilized soil and 0.5 in fertilized soil, although these differences were not statistically significant.     

An assessment of factors controlling N<Subscript>2</Subscript>O and CO<Subscript>2</Subscript> emissions from crop residues using different measurement approaches

Management of plant residues plays an important role in maintaining soil quality and nutrient availability for plants and microbes. However, there is considerable uncertainty regarding the factors controlling residue decomposition and their effects on greenhouse gas (GHG) emissions from the soil. This uncertainty is created both by the complexity of the processes involved and limitations in the methodologies commonly used to quantify GHG emissions. We therefore investigated the addition of two soil residues (durum wheat and faba bean) with similar C/N ratios but contrasting fibres, lignin and cellulose contents on nutrient dynamics and GHG emission from two contrasting soils: a low-soil organic carbon (SOC), high pH clay soil (Chromic Haploxerert) and a high-SOC, low pH sandy-loam soil (Eutric Cambisol). In addition, we compared the effectiveness of the use of an infrared gas analyser (IRGA) and a photoacoustic gas analyser (PGA) to measure GHG emissions with more conventional gas chromatography (GC). There was a strong correlation between the different measurement techniques which strengthens the case for the use of continuous measurement approaches involving IRGA and PGA analyses in studies of this type. The unamended Cambisol released 286% more CO₂ and 30% more N₂O than the Haploxerert. Addition of plant residues increased CO₂ emissions more in the Haploxerert than Cambisol and N₂O emission more in the Cambisol than in the Haploxerert. This may have been a consequence of the high N stabilization efficiency of the Haploxerert resulting from its high pH and the effect of the clay on mineralization of native organic matter. These results have implication management of plant residues in different soil types.     

Climate change goes underground: effects of elevated atmospheric CO<Subscript>2</Subscript> on microbial community structure and activities in the rhizosphere

General concern about climate change has led to growing interest in the responses of terrestrial ecosystems to elevated concentrations of CO₂ in the atmosphere. Experimentation during the last two to three decades using a large variety of approaches has provided sufficient information to conclude that enrichment of atmospheric CO₂ may have severe impact on terrestrial ecosystems. This impact is mainly due to the changes in the organic C dynamics as a result of the effects of elevated CO₂ on the primary source of organic C in soil, i.e., plant photosynthesis. As the majority of life in soil is heterotrophic and dependent on the input of plant-derived organic C, the activity and functioning of soil organisms will greatly be influenced by changes in the atmospheric CO₂ concentration. In this review, we examine the current state of the art with respect to effects of elevated atmospheric CO₂ on soil microbial communities, with a focus on microbial community structure. On the basis of the existing information, we conclude that the main effects of elevated atmospheric CO₂ on soil microbiota occur via plant metabolism and root secretion, especially in C3 plants, thereby directly affecting the mycorrhizal, bacterial, and fungal communities in the close vicinity of the root. There is little or no direct effect on the microbial community of the bulk soil. In particular, we have explored the impact of these changes on rhizosphere interactions and ecosystem processes, including food web interactions.     

Impact of elevated CO<Subscript>2</Subscript>, flooding,and temperature interaction on heterotrophic nitrogen fixation in tropical rice soils

Response of N₂ fixation to elevated CO₂ would be modified by changes in temperature and soil moisture because CO₂ and temperature or water availability has generally opposing effects on N₂ fixation. In this study, we assessed the impacts of elevated CO₂ and temperature interactions on nitrogenase activities, readily mineralizable C (RMC), readily available N (NRN) contents in an alluvial and a laterite rice soil of tropical origin. Soil samples were incubated at ambient (370 μmol mol^-1) and elevated (600 μmol mol^-1) CO₂ concentration at 25oC, 35oC, and 45oC under non-flooded and flooded conditions for 60 days. Elevated CO₂ significantly increased nitrogenase activities and readily mineralizable C in both alluvial and laterite soils. All these activities were further stimulated at higher temperatures. Increases in nitrogenase activity as a result of CO₂ enrichment effect over control were 16.2%, 31.2%, and 66.4% and those of NRN content were 2.0%, 1.8%, and 0.5% at 25oC, 35oC and 45oC, respectively. Increases in RMC contents were 7.7%, 10.0%, and 10.6% at 25°C, 35°C and 45°C, respectively. Soil flooding resulted in a more clear impact of CO₂ enrichment than the non-flooded soil. The results suggest that in tropical rice soils, elevated CO₂ increased readily available C content in the soil, which probably stimulates growth of diazotrophic bacteria with enhanced N₂ fixation and thereby higher available N.     

N<Subscript>2</Subscript>O emission from conventional and minimum-tilled soils

In this study, we investigated N₂O emissions from two fields under minimum tillage, cropped with maize (MT maize) and summer oats (MT oats), and a conventionally tilled field cropped with maize (CT maize). Nitrous oxide losses from the MT maize and MT oats fields (5.27 and 3.64 kg N₂O-N ha⁻¹, respectively) were significantly higher than those from the CT maize field (0.27 kg N₂O-N ha⁻¹) over a period of 1 year. The lower moisture content in CT maize (43% water-filled pore space [WFPS] compared to 60–65%) probably caused the difference in total N₂O emissions. Denitrification was found to be the major source of N₂O loss. Emission factors calculated from the MT field data were high (0.04) compared to the CT field (0.001). All data were simulated with the denitrification decomposition model (DNDC). For the CT field, N₂O and N₂O + N₂ emissions were largely overestimated. For the MT fields, there was a better agreement with the total N₂O and N₂O + N₂ emissions, although the N₂O emissions from the MT maize field were underestimated. The simulated N₂O emissions were particularly influenced by fertilization, but several other measured N₂O emission peaks associated with other management practices at higher WFPS were not captured by the model. Several mismatches between simulated and measured \textNH₄⁺ {\text{NH}}_4^ + , \textNO₃^- {\text{NO}}_3^ - and WFPS for all fields were observed. These mismatches together with the insensitivity of the DNDC model for increased N₂O emissions at the management practices different from fertilizer application explain the limited similarity between the simulated and measured N₂O emissions pattern from the MT fields.     

Elevated CO<Subscript>2</Subscript> alters the abundance but not the structure of diazotrophic community in the rhizosphere of soybean grown in a Mollisol

The effect of elevated CO₂ (eCO₂) on rhizospheric diazotrophic community in cropland has little been studied, although eCO₂ facilitates nodulation and N₂ fixation in legumes. In this study, four soybean cultivars (Xiaohuangjin, Suinong 8, Suinong 14, and Heinong 45) were grown in Mollisols for 65 days under ambient CO₂ (aCO₂) (390 ppm) or eCO₂ (550 ppm). Quantitative PCR and Illumina MiSeq sequencing targeting the nifH gene that reflects the composition of diazotrophic community were determined. Elevated CO₂ significantly increased the abundance of nifH gene copies in the rhizospheres of the Suinong 8 and Heinong 45 cultivars, but not in the Suinong 14 and Xiaohuangjin cultivars. The nifH abundance correlated negatively with nodule density (p?≤?0.01) but positively with nodule size (p?≤?0.01). Elevated CO₂ did not significantly alter the composition of diazotrophic community, nor shift dominant bacterial operational taxonomic units (OTUs). These results indicated that eCO₂ stimulated the growth but did not alter the community composition of diazotrophs in the rhizosphere of soybean, which depended on cultivar and might contribute to nodulation responses to eCO₂.     

Nitrogen rhizodeposition of young wheat plants under elevated CO<Subscript>2</Subscript> and drought stress

The objective of this study was to determine the effect of drought stress and elevated CO₂ concentrations around the shoots on N rhizodeposition of young wheat plants. In a pot experiment, the plant N pool was labeled through ¹⁵NH₃ application to shoots at nontoxic NH₃ concentrations, and the impact of low water supply (40% field capacity), elevated CO₂ (720 μmol mol⁻¹ CO₂), and the combination of both factors on the ¹⁵N distribution was studied. Total ¹⁵N rhizodeposition ranged from 5 to 11% of the total ¹⁵N recovered in the plant/soil system. Elevated CO₂ concentration as well as drought stress increased the belowground transport of N and increased the relative portion of N rhizodeposition on total ¹⁵N in the plant/soil system. However, while the increased N rhizodeposition with elevated CO₂ was the result of increased total belowground N transport, drought stress additionally increased the portion of ¹⁵N found in rhizodeposition vs roots. Elevated CO₂ intensified the effect of drought stress. The percentage of water soluble ¹⁵N in the ¹⁵N rhizodeposition was very low under all treatments, and it was significantly decreased by the drought-stressed treatments.