Characterization of ammonia oxidizing bacteria associated with weeds in a Japanese paddy field using amoA gene fragments

Abstract

Ammonia oxidizing bacteria (AOB) are important microorganisms in rice paddy field ecosystems because they play a key role in the nitrogen (N) cycle by converting ammonia (NH₃) to nitrite (NO^? ₂). In this study, we investigated AOB associated with three types of weeds in a Japanese paddy field (semi-aquatic Echinochloa oryzicola Vasing, floating Lemna paucicostata Hegelm and submerged Najas graminea Delile) using molecular techniques polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and DNA sequencing targeting ammonia monooxygenase (amoA) gene. This work confirmed that rice paddy weeds harbor AOB and that the community composition is different for each type of weed. However, all AOB sequences associated with the tested weeds were closely related to known species of Nitrosospira-like AOB isolated from soil, suggesting that AOB associated with weeds were not specific to weeds and can also be found in the soil. Nitosomanas-like AOB were not detected on any of the weeds tested. In addition, the most dominant AOB strains present in the tested weeds were closely related to Nitrosospira sp. Ka3 and Nitrosospira sp. CT2F. The phylogenetic tree revealed that most of the AOB detected in the present study belonged to amoA cluster 1.     

稻田中藻类的生长状况及其对肥料氮的固持

为了确定藻类对稻田生态系统中氮素固持与迁移过程的影响程度,本研究采用田间小区和15N微区试验,在水稻生长的不同时期,观测了藻类在稻田中的生长状况,定量测定了藻类的生物量和氮素固持量.结果显示,稻田中的藻类具有明显的群落演替特征,水稻生育初期以球状藻为主,中后期则以丝状藻为主.藻类的生长可分为两个阶段,即生长期和衰亡期,其中,生长期从稻秧移栽初期至拔节期,衰亡期从拔节期至水稻收获.在衰亡期,藻类生物量随时间的变化符合生长曲线模式.藻类生物质干重在2007和2009年水稻生育期的变化范围分别为205～610 kg/hm2和12～353 kg/hm2,而藻类氮素固持量则分别为N 5.4～17.5 kg/hm2和N0.4～11.0 kg/hm2.15N微区试验结果显示,藻类对15N的固持量为N 0.3～6.0 kg/hm2,占氮素总固持量的54％～68％,平均为57％,表明藻类固持的氮素中大部分来源于当季施入的氮肥.     

Soil carbon dioxide flux, carbon sequestration and crop productivity in a tropical dryland agroecosystem: Influence of organic inputs of varying resource quality

In view of the significance of agricultural soils in affecting global C balance, the impact of manipulation of the quality of exogenous inputs on soil CO₂–C flux was studied in rice–barley annual rotation tropical dryland agroecosystem. Chemical fertilizer, Sesbania shoot (high quality resources), wheat straw (low quality resource) and Sesbania + wheat straw (high + low quality), all carrying equivalent recommended dose of N, were added to soil. A distinct seasonal variation in CO₂–C flux was recorded in all treatments, flux being higher during rice period, and much reduced during barley and summer fallow periods. During rice period the mean CO₂–C flux was greater in wheat straw (161% increase over control) and Sesbania + wheat straw (+129%) treatments; however, during barley and summer fallow periods differences among treatments were small. CO₂–C flux was more influenced by seasonal variations in water-filled pore space compared to soil temperature. In contrast, the role of microbial biomass and live crop roots in regulating soil CO₂–C flux was highly limited. Wheat straw input showed smaller microbial biomass with a tendency of rapid turnover rate resulting in highest cumulative CO₂–C flux. The Sesbania input exhibited larger microbial biomass with slower turnover rate, leading to lower cumulative CO₂–C flux. Addition of Sesbania to wheat straw showed higher cumulative CO₂–C flux yet supported highest microbial biomass with lowest turnover rate indicating stabilization of microbial biomass. Although single application of wheat straw or Sesbania showed comparable net change in soil C (18% and 15% relative to control, respectively) and crop productivity (32% and 38%), yet they differed significantly in soil C balance (374 and −3 g C m⁻² y⁻¹ respectively), a response influenced by the recalcitrant and labile nature of the inputs. Combining the two inputs resulted in significant increment in net change in soil C (33% over control) and crop yield (49%) in addition to high C balance (152 g C m⁻² y⁻¹). It is suggested that appropriate mixing of high and low quality inputs may contribute to improved crop productivity and soil fertility in terms of soil C sequestration.     

Tubificid role in soil mineralization and recovery of algal nitrogen by lowland rice

Uptake of blue-green algal nitrogen (N) and total N uptake by lowland rice (Oryza sativa) was affected by tubificid (Oligochaeta) presence in submerged soils. Recovery of algal ¹⁵N by the first crop was 24–43% but only 4–7% for the second, and recovery was determined by both the method of algal application (surface vs buried) and the presence of tubificids. Tubificid activities reduced recovery of algal N by rice, increased its total N content and doubled losses of ¹⁵N to the atmosphere. Soil N uptake by rice was increased by tubificid presence. Soil N mineralization, measured as NH₄⁺ production, was doubled over 7 days by their activities and algal mineralization was also apparently enhanced. The NH₄⁺ release rate of Limnodrilus sp. was 4.11 ± 0.06 ng NH₄⁺-N mg ash free dry wt^?1 h^?1. Effects of tubificids on rice nutrition are discussed.     

Suppressing methane emission and global warming potential from rice fields through intermittent drainage and green biomass amendment

Winter cover crops are recommended to improve soil quality and carbon sequestration, although their use as green manure can significantly increase methane (CH₄) emission from paddy soils. Soil management practices can be used to reduce CH₄ emission from paddy soils, but intermittent drainage is regarded as a key practice to reduce CH₄ emission and global warming potential (GWP). However, significantly greater emissions of carbon dioxide (CO₂) and nitrous oxide (N₂O) are expected when large amounts of cover crop biomass are incorporated into soils. In this study, we investigated the effects of midseason drainage on CH₄ emission and GWP following incorporation of 0, 3, 6 and 12 Mg/ha of cover crop biomass. Methane, CO₂ and N₂O emission rates significantly (P < 0.05) increased with higher rates of cover crop biomass incorporation under both irrigation conditions. However, intermittent drainage effectively reduced seasonal CH₄ fluxes by ca. 42–46% and GWP by 17–31% compared to continuous flooding. Moreover, there were no significant differences in rice yield between the two water management practices with similar biomass incorporation rates. In conclusion, intermittent drainage and incorporation of 3 Mg/ha of green biomass could be a good management option to reduce GWP.     

Dynamics of microbial biomass nitrogen as influenced by organic matter application in paddy fields

The effects of annual application of rice straw or cow manure compost for 17–20 y on the dynamics of fertilizer N and soil organic N in Gley paddy fields were investigated by using the ¹⁵N tracer technique during the rice cropping season. The chloroform fumigation-extraction method was evaluated to determine the properties of soil microbial biomass under submerged field conditions at the tillering stage before mid-summer drainage, with special reference to the fate of applied NH₄ ⁺-¹⁵N.

The transfer ratios from applied NH₄ ⁺-¹⁵N to immobilized N in soil and to uptake N by rice during given periods varied with the rice growth stages and were affected by organic matter application. The accumulated amounts of netmineralized soil organic N (net-M_j ), immobilized N (I_j ), and denitrified N (D_j ) during the cropping season were estimated to be 14.0–22.5, 6.3–11.2, and 3.4–5.3 g N m^-2, respectively. Values of net-M_j and I_j were larger in the following order: cow manure compost plot > rice straw plot > plot without organic matter application, and their larger increase by the application of cow manure compost contributed to a decrease of the D_j values, as compared with rice straw application.

Values of E _N extra extractable soil total N after fumigation, increased following organic matter application, ranging from 2.1 to 5.4 g N m^-2. Small residual ratios of applied ¹⁵N in the fraction E _N at the end of the given period indicated that re-mineralization of newly-assimilated ¹⁵N through the easily decomposable fraction of microbial biomass had almost ended. Thus, the applicability to paddy field soils of the chloroform fumigation-extraction method was confirmed.     

Phosphorus skipping effect on productivity,profitability and sustainability of rice-wheat cropping systems in Indo-Gangetic plains of India

A field experiment was conducted for eight years at ICAR-Indian Institute of Wheat and Barley Research, Karnal, Haryana, India to study the skipping effect of P application on productivity, profitability and sustainability of rice-wheat cropping system. Rice yield and biomass were 8.35% and 6.6% higher where cowpea was grown after wheat compared to rice-vegetable pea-wheat crop sequence, respectively. Phosphorus application to rice or wheat or both crops exhibited at par rice grain yield, biomass, harvest index. Phosphorus application to both crops or only in rice crop produced maximum and significantly higher wheat yield (4.62 t ha^?1) as compared to P application only to wheat (4.48 t ha^?1). Eight years growing of green gram, cowpea and vegetable pea increased the organic carbon content 42.89, 16.38 and 4.57 %, respectively compared to the initial level. Skipping of P to either crop, by considering 13.5 million ha rice-wheat area, will save approximately Rs 40,500 million (Rs = Indian rupee) or US $ 623 million ($ = Rs 65) per year. Air pollution may be checked, due to saving on diesel in transportation of P fertilizer, to the tune of 60,383 tonnes of CO₂ per year by reducing emission of one of important global warming gas.     

Evaluation of Water–Nitrogen Schemes for Rice in Iran,Using ORYZA2000 Model

The model ORYZA2000 simulates the growth and development of rice under conditions of potential production and water and nitrogen (N) limitations. Crop simulation models could provide an alternative, less time-consuming, and inexpensive means of determining the optimum crop N and irrigation requirements under varied irrigation and nitrogen conditions. Water productivity (WP) is a concept of partial productivity and denotes the amount or value of product over volume or value of water used. For the evaluated ORYZA2000 model in Iran, a study was carried out in a randomized complete block design between 2005 and 2007, with three replications at the Rice Research Institute of Iran, Rasht. Irrigation management (three regimes) was the main plot and N application (four levels) was the subplot. In this study, simulation modeling was used to quantify water productivity and water balance components of water and nitrogen interactions in rice. Evaluation simulated and measured total aboveground biomass and yield, by adjusted coefficient of correlation, T test of means, and absolute and normalized root mean square errors (RMSE). Results showed that with normalized root mean square errors (RMSE_n) of 5–28%, ORYZA2000 satisfactorily simulated crop biomass and yield that strongly varied among irrigation and nitrogen fertilizer conditions. Yield was simulated with an RMSE of 237–443 kg ha^?1 and a normalized RMSE of 5–11%. Results showed that the significant (28–56%) share of evaporation into evapotranspiration, using the actual yield (measured) and simulated water balance (ORYZA2000), the calculated average WP_ET was significantly lower than the average WP_T: 37%. The average WP_I, WP_I+R, WP_ET, WP_T, and WP_ETQ were 1.4, 1.07, 1.07, 1.57, and 0.82 kg m^?3. Results also showed that irrigation with 8-day intervals and 60 kg N ha^?1, nitrogen level was the optimum irrigation regime and nitrogen level.     

Bioresource Nutrient Recycling and Its Relationship with Biofertility Indicators of Soil Health and Nutrient Dynamics in Rice–Wheat Cropping System

A field experiment was conducted for 3 years during 2006–2009 in India to study the effects of plant nutrient recycling through crop residue management, green manuring, and fertility levels on yield attributes, crop productivity, nutrient uptake, and biofertility indicators of soil health in a rice–wheat cropping system. The study revealed that soil microbial biomass carbon (SMBC) and carbon dioxide (CO₂) evolution were significantly greatest under crop residue incorporation (CRI) + Sesbania green manuring (SGM) treatment and were found at levels of 364 μg g^?1 soil and 1.75 μg g^?1 soil h^?1, respectively; these were increased significantly by recycling of organic residues. Activities of dehydrogenase and phosphatase enzymes increased significantly after 3 years, with maximum activity under CRI + SGM treatment. The CRI with or without SGM significantly influenced the plant height, number of tillers m^?2, number of grains panicle^?1 or ear^?1, and 1000-grain weight. Mean yield data of rice and wheat revealed that CRI or crop residue burning (CRB) resulted in slightly greater yield over crop residue removal (CRR) treatment. The CRI + SGM treatment again observed significantly greatest grain yields of 7.54 and 5.84 t ha^?1 and straw yields of 8.42 and 6.36 t ha^?1 in rice and wheat, respectively, over other crop residue management treatments. Total nitrogen (N), phosphorus (P) and potassium (K) uptake in rice–wheat system was greatest with amounts of 206.7, 37.2, and 205.6 kg ha^?1, respectively, in CRI + SGM treatment. Fertility levels significantly influenced the rice and wheat yield with greatest grain yields of 6.66 and 5.68 t ha^?1 and straw yields of 7.94 and 5.89 t ha^?1 in rice and wheat, respectively, with the application of 150% of recommended NPK. Total NPK uptake in rice–wheat system also increased significantly with increase in fertility levels with greatest magnitude by supplying 150% of recommended NPK. Overall, nutrient recycling through incorporation of crop residues and Sesbania green manuring along with inorganics greatly improved the crop productivity, nutrient uptake, and biofertility indicators of soil health with substantial influence on SMBC, CO₂ evolution, and dehydrogenase and phosphatase enzyme activities. This indicates that crop residue management along with Sesbania green manuring practice could be a better option for nutrient recycling to sustain the crop productivity and soil health in intensive rice–wheat cropping system in India as well as in similar global agroecological situations, especially in China, Pakistan, and Bangladesh.     

Prospects of using leguminous green manuring crop Sesbania rostrata for supplementing fertilizer nitrogen in rice production and control of environmental pollution

Abstract

Modern rice cultivation relies on chemical nitrogen (N) fertilizer that ultimately degrades soil health and creates environmental pollution. The increasing concerns about environmental pollution, restoring soil health, and conservation of energy, public attention is now towards green manures as supplement for N fertilizer. Sesbania rostrata is a popular leguminous green manuring crop that fixes atmospheric N₂, improves soil health, and rice productivity through incorporation of its biomass in to soil. About 40–60?days plants provide 5–6 tons dry biomass that can supplement 50–100% N requirement. In world, it is adapted as pre-rice or post-rice green manuring crop. Long-term use of S. rostrata improves soil health and increased rice yield by 9–11% over chemical fertilizer. Use of S. rostrata in large scale for rice production can reduce environmental pollution problems as it can cut down chemical N requirement and thus reduction dispersal of Nr to the environment.     

CO2/heat fluxes in rice fields: Comparative assessment of flooded and non-flooded fields in the Philippines

The seasonal fluxes of heat, moisture and CO₂ were investigated under two different rice environments: flooded and aerobic soil conditions, using the eddy covariance technique during 2008 dry season. The fluxes were correlated with the microclimate prevalent in each location. This study was intended to monitor the environmental impact, in terms of C budget and heat exchange, of shifting from lowland rice production to aerobic rice cultivation as an alternative to maintain crop productivity under water scarcity.The aerobic rice fields had higher sensible heat flux (H) and lower latent heat flux (LE) compared to flooded fields. On seasonal average, aerobic rice fields had 48% more sensible heat flux while flooded rice fields had 20% more latent heat flux. Consequently, the aerobic rice fields had significantly higher Bowen ratio (0.25) than flooded fields (0.14), indicating that a larger proportion of the available net radiation was used for sensible heat transfer or for warming the surrounding air.The total C budget integrated over the cropping period showed that the net ecosystem exchange (NEE) in flooded rice fields was about three times higher than in aerobic fields while gross primary production (GPP) and ecosystem respiration (R_e) were 1.5 and 1.2 times higher, respectively. The high GPP of flooded rice ecosystem was evident because the photosynthetic capacity of lowland rice is naturally large. The R_e of flooded rice fields was also relatively high because it was enhanced by the high photosynthetic activities of lowland rice as manifested by larger above-ground plant biomass. The NEE, GPP, and R_e values for flooded rice fields were −258, 778, and 521 g C m⁻², respectively. For aerobic rice fields, values were −85, 515, and 430 g C m⁻² for NEE, GPP, and R_e, respectively. The ratio of R_e/GPP in flooded fields was 0.67 while it was 0.83 for aerobic rice fields.This short-term data showed significant differences in C budget and heat exchange between flooded and aerobic rice ecosystems. Further investigation is needed to clarify seasonal and inter-annual variations in microclimate, carbon and water budget of different rice production systems.     

长期稻草还田对紫色水稻土肥力和生产力的影响

通过8年淹水条件下一季中稻的田间定位试验,研究了长期稻草还田以及稻草与不同化肥配合施用对紫色水稻土生产力和土壤肥力的影响。结果表明,稻草与N、P、K化肥配合施用能维持或提高紫色水稻土的生产力和土壤肥力;水稻获得了持续高产,土壤有机质和全氮含量提高,土壤磷的有效性增加,速效钾与试验前基本平衡。纯化肥处理尤其是N、NP、NK处理水稻产量、土壤氮和钾含量逐年降低,不能维持系统生产力和土壤肥力。稻草还田对翌年水稻具有显著的增产作用,8年平均稻草还田处理比对照增产39.5%,稻草的增产作用还随着稻草还田时间的延长而逐年升高。稻草还田携入的钾与化学钾肥具有相同的营养功效,稻草可替代部分化学钾肥。     

Long-term fertilizer management in NERICA cultivated upland affects on soil bio-chemical properties

ABSTRACT

This study aims to characterize soil chemical properties and microbial biomass, greenhouse gas production, and organic matter dynamics in upland rice field as affected by the long-term fertilizer managements in Uganda. Soil total C (TC) and N (TN) contents were in the relatively smaller range under different fertilizer treatments, even after 20 crop seasons. However, available phosphate contents showed positive correlation with average yield of upland rice. Incubation experiments were conducted under aerobic or under flooding conditions to measure CO₂, methane, and nitrous oxide productions. After the incubation, soil samples were extracted to quantify nitrification rate for aerobic condition and ammonification rate for flooding condition. Soil microbial biomass carbon (MBC) and nitrogen were measured. Stable isotope ratio of ¹³C and ¹⁵N were also determined for the soil samples. CO₂ production potential under aerobic condition was higher than the flooding condition. The qCO₂ (CO₂/MBC) in the treatment applied with compost tended to be higher than the other treatments. Positive correlation between nitrous oxide production and nitrification was found. The delta ¹³C values of the soil samples indicated that the effect of C4 plants before rice cultivation still remained, while the contribution of biological N₂ fixation was little according to delta ¹⁵N values. These results indicate that soil microbial biomass in upland rice field of the long-term fertilizer experiment in Uganda was characterized with higher qCO₂. Greenhouse gas production was affected by fertilizer management, while soil organic C before the long-term experiment still remained in the experiment.     

Measuring the rhizodeposition of carbon by rice: an approach based on carbon flux observations

ABSTRACT

Rhizodeposition is an important component of carbon cycling in terrestrial ecosystems. However, there remains tremendous uncertainty in its quantification due to the methodological limitations. In the present study, we propose a method to evaluate the rhizodeposition by plants by observing carbon flux. We investigated the ecosystem CO₂ flux variability and calculated the rhizodeposition of carbon by the rice rhizosphere, by using the carbon flux, meteorological data, and biomass observation from 2003 to 2011 at the Taoyuan Agro-ecological Experimental Station, a representative subtropical paddy ecosystem. Our data indicated that the process of rhizodeposition is the major reason for the discrepancy between the biomass and net primary productivity of the paddy ecosystem under intensive human interference. Both the amount and ratio of rhizodeposition of carbon in this paddy ecosystem were assessed; this provides important theoretical and methodological support for further investigating rhizodeposition by rice under field conditions. The rhizodeposition amount in the growing season of early rice, late rice, and for the entire planting period was 0.52–2.56, 0.74–3.75, and 1.61–5.24 t ha^?1, respectively, with the corresponding mean (±SD) rhizodeposition ratios of 23.16 ± 8.87%, 28.16 ± 12.94%, and 27.00 ± 9.3%. This method enabled us to calculate rhizodeposition under in situ conditions, and the results showed that the growing season of late rice was the primary period for rhizodeposition in rice ecosystem.     

Water Use and Soil Fertility under Rice–Wheat Cropping System in Response to Green Manuring and Zinc Nutrition

ABSTRACT

Soil fertility and water use are two important aspects that influence rice productivity. This study was conducted to evaluate the performance of in-situ (sesbania and rice bean) and ex-situ (subabul) green manuring along with zinc fertilization on water productivity and soil fertility in rice under rice–wheat cropping system at Indian Agricultural Research Institute, New Delhi, India. Sesbania incorporation recorded higher total water productivity (2.20 and 3.24 kg ha^?1 mm^?1), available soil nutrients, organic carbon, alkaline phosphatase activity, microbial biomass carbon and increased soil dehydrogenase activity by 39.6 and 26.8% over subabul and rice bean respectively. Among interaction of green manures and zinc fertilization, subabul × foliar application of chelated zinc-ethylenediaminetetraacetic acid at 20, 40, 60 and 80 days after transplanting recorded highest total water productivity (2.56 and 3.79 kg ha^?1 mm^?1). Foliar application of chelated Zn-EDTA at 20, 40, 60 and 80 days after transplanting recorded significantly higher water productivity than other Zn treatments, however it was statistically similar with foliar application of zinc at active tillering + flowering + grain filling. Sesbania × 5 kg Zn ha^?1 through chelated Zn-EDTA, recorded highest available nitrogen, phosphorus, potassium, zinc, manganese, copper and iron than other green manure and Zn fertilization interactions, although it was statistically similar with rice bean × 5 kg Zn ha^?1 through chelated Zn-EDTA as soil application. Sesbania × foliar application of 5 kg Zn ha^?1 through chelated Zn-EDTA as soil application recorded highest soil enzymatic activities and microbial biomass carbon.     

Nitrification of ammonium in different components of a flooded rice soil system

Nitrification associated with the various components [subsurface soil from unplanted and planted (rhizosphere) fields, standing water and surface soil from planted and unplanted fields and leaf sheath suspensions] of submerged rice paddies was examined in incubation experiments with solutions inoculated with soil or water samples. Substantial nitrification occurred in all samples, standing water and surface soil samples in particular, during their 40-day incubation with NH ₄ ⁺ –N. Almost all the NH ₄ ⁺ –N, disappeared during incubation with standing water, was recovered as NO _inf3 ^sup- –N. This, compared to 70–80% from all soil samples and only 29% from leaf sheath suspensions. Significant loss of nitrogen, especially from leaf sheath suspensions, is probably due to nitrification-denitrification as evidenced by its complete recovery in the presence of N-Serve. Nitrification potential of the soil and water samples varied with the crop growth stage and was more pronounced at tillering and panicle inititation stages than at other stages. Nitrification potential of samples from green-manure-amended plots was distinctly less than that of samples from control and urea-amended plots. Most probable number (MPN) estimates of ammonium-oxidizing bacteria were always higher in surface soil in both planted and unplanted plots at all stages of crop growth.Dedicated to Professor J. C. G. Ottow on the occasion of his 60th birthday     

Distribution of Nitrogen between Crop and Weeds in Spring Cereals

Abstract

The nitrogen content of the above-ground biomass of crop and weeds was assessed one week after crop heading in the beginning of July in spring barley and spring wheat. Crops were sown with a combined sowing and fertilizing machine at five seed rates. The trial plots received nitrogen, 90 kg ha^?1. No herbicides were applied. In spring barley sown at a normal seed rate, less than 5% of the nitrogen in the above-ground biomass was accumulated in weeds. In spring wheat stands the corresponding amount averaged 10–15%. The nitrogen concentration in the crop biomass averaged 1.8% of the dry weight and that in mixed weed species 3.2%. Under normal growth conditions the N concentration in crop and weeds was relatively constant at the time of crop heading. Variations in N accumulation between crop plants and weeds are explained by the different biomass production of the plants.     

Zinc nutrition of rice as influenced by crop establishment methods,rates of nitrogen and phosphorus fertilization and inoculation with microbial consortia

Abstract

Zinc (Zn) fertilization in rice is important to enhance productivity and increase Zn concentration in rice grain to improve its nutritional status. A field experiment was conducted in wet seasons of 2013 and 2014 to study Zn nutrition of rice in three different crop establishment methods (CEMs) viz. puddled transplanted rice (PTR), system of rice intensification (SRI) and aerobic rice system (ARS), under three different rates of nitrogen (N) and phosphorus (P) viz. 0, 75 and 100% of recommended dose of fertilizer (RDF) (120?kg N ha^?1 and 25.8?kg P ha^?1) and two different sources of N and P viz. chemical fertilizer and microbial inoculation (MI). Concentration and uptake of Zn at different growth stages and in straw and milled rice was significantly higher in PTR and SRI than ARS. Soil DTPA–extractable Zn content of soil was increased by 1142.4, 1140.3 and 755.8?g ha^?1 in PTR, SRI and ARS after two year of Zn fertilization (soil application of 5?kg Zn ha^?1). Zinc nutrition increase its Zn concentration in straw and milled rice and improvement in total uptake was 38.1, 40.3 and 40.8?g ha^?1 when Zn was applied with RDF, 75% RDF + Anabaena sp. (CR1) + Providencia sp (PR3) consortia (MI1) and 75% RDF + Anabaena-Pseudomonas biofilmed bio-fertilizer (MI2), respectively. Positive correlation between milled rice yield and Zn concentration (R²= 0.95 and 0.97) showed the importance of Zn nutrition in improving rice yield. Zinc concentration at 70?days after sowing (DAS) and 100 DAS was also found positively correlated with dehydrogenase activity and microbial biomass carbon in soil.     

Simulating the Production of Rice Genotypes by Flood Management and End-Season Water Stress Conditions Using AquaCrop Model

ABSTRACT

The present study was conducted to assess the ability of AquaCrop model in predicting of grain and biological yield of rice genotypes in water management. A two-year field experiment was conducted at the experimental farm of the Iranian Rice Research Institute in Rasht, Iran from 2016 to 2017. The experiment was established in a split-plot design with two irrigation management (continuous submergence and end season water stress) as the main plot, fourth rice genotypes as the sub-plot and three replications. The goodness-of-fit between observed and simulated grain yield and final biomass was assessed by means of the coefficient of determination (R ²), the absolute and normalized root mean square errors (RMSE). The RMSE_n of predicting grain yield at calibration and evaluation stages was in the range of 6–12% and 6–8% for biological yield. The results indicated that AquaCrop model is suitable to predict grain yield and biological yield of rice genotypes in northern Iran. AquaCrop model can be used to determine optimization strategies to improve the water consumption of rice genotypes.     

Italian ryegrass–rice rotation system for biomass production and cadmium removal from contaminated paddy fields

Purpose

Growing energy plants in Cd-contaminated soil to produce bioenergy feedstock and remove excess Cd in the soil is a promising approach to the production of sustainable bioenergy feedstock and safe food. Rice, an important staple food for human beings, is a major source of Cd intake in human beings. Italian ryegrass (Lolium multiflorum Lam) is a potential bioenergy plant with high biomass productivity and high biofuel conversion efficiency.

Materials and methods

An Italian ryegrass and rice crop rotation system would be beneficial for the harvest of bioenergy and phytoremediation. An Italian ryegrass–rice rotation system was established in a moderately Cd-contaminated paddy field. The yield of biomass, amount of Cd removal, and transfer factors for three cropping systems (winter fallow, non-cutting, and cutting) were evaluated over 3 consecutive years of field experiments.

Results and discussion

The total biomass production of the Italian ryegrass–rice rotation system was significantly higher than that of the traditional cropping system. Biomass growth was further promoted by cutting during March. No significant differences were found in yield or Cd concentration of brown rice among the different cropping systems. Total Cd accumulation in rice and Italian ryegrass straw in the rotation cropping system was significantly higher than that in the winter fallow cropping system. Cd was mainly accumulated in the roots, and the ability of Italian ryegrass to transport Cd to the leaves was higher than that of rice.

Conclusions

The Italian ryegrass–rice rotation system is a potential cropping system for Cd-contaminated paddy fields. The average annual yield of biomass was 1656.6 kg km^?2, and the average annual amount of Cd removal was more than 9.8 g Cd km^?2.