Associations of fish with various types of littoral habitats in reservoirs

Fish associations with different types of littoral habitats were studied in four canyon‐shaped reservoirs in the Czech Republic in years 2010 and 2011 by gillnets. Two to three habitats per reservoir–beaches (former meadows), stump fields (former forest) and rubble slopes–were defined and sampled along the longitudinal axis of reservoirs. Effects of reservoir, habitat and locality (position along longitudinal axis) on fish biomass, abundance and species structure were tested for juvenile and adult fish separately. Hierarchical analysis of variance revealed that habitats differed significantly in fish biomass and abundance. Redundancy analysis showed that analysed environmental variables had significant influence on fish community structure. Most variability in community structure was explained by reservoir and then by combination of habitat and slope steepness. Locality position had the smallest influence on community structure. For both adult and juvenile fish total abundance and biomass, the most inhabited habitat was beaches; rubble slopes were the least inhabited. Habitat associations differed among species. Among adults, bream Abramis brama, white bream Blicca bjoerkna and roach Rutilus rutilus were associated with beaches and stump fields, whereas perch Perca fluviatilis, ruffe Gymnocephalus cernuus, asp Aspius aspius and pike Esox lucius were associated with rubble slopes. Bream, white bream, bleak Alburnus alburnus, roach, ruffe and pikeperch Sander lucioperca were associated with beaches among juveniles, whereas the only juvenile associated with rubble slopes was perch. We showed that most common species are associated with distinct habitats and also that utilisation of various littoral habitats differs in general.     

Can fish sampling protocol (CEN, 2005) be amended for Mediterranean lakes?

The CEN (2005) methodology for fish monitoring of mesotrophic to eutrophic Mediterranean lakes was evaluated. The contribution of gillnet (benthic and pelagic) and electrofishing catches on species richness was examined. Additionally, the contribution of benthic gillnet sampling effort on species richness and precision of catch‐per‐unit‐effort (CPUE) estimates, considering both number of specimens (ΝPUE) and biomass (BPUE), was assessed. Subsequently, the impact of reduction in sampling effort on the parameters mentioned above was estimated and the effort needed to acquire the desired precision level considering different NPUE values was modelled. The use of different sampling gears was found to contribute to species richness assessment, while sampling effort could be reduced in the deepest zones of the lakes. The resultant model can reliably guide assessment of the sampling effort required in the Mediterranean and central European lakes with high fish densities.     

A comparison of methods for calculating Catch Per Unit Effort (CPUE) of gill net catches in lakes

Fish constitute an important component of lake ecosystems and many different methods have been used for fish assessment. Based on gill net catches in two stratified (max depth = 14–22 m) eutrophic Danish lakes, relative fish abundance measured as Catch Per Unit Effort (CPUE) was calculated. We used three different methods of which two followed the European standard based on benthic nets (CEN (European Committee for Standardization), 2005: EN 14757. Water quality – Sampling of fish with multi-mesh gill nets. Brussels, 27 pp.), one assuming equal volumes in all depth strata and the other using calculated volumes in the depth strata. The third method followed a modified CEN standard, adopted as a new Danish (DK) standardized method based on calculated benthic and pelagic water volumes and by including both benthic nets and, compared to the CEN standard, an increased fishing effort with pelagic nets. Fish were concentrated in the littoral/benthic part of the upper two depth strata (0–6 m depth) with an up to 8 fold higher abundance than in the pelagic. Calculated CPUE is highly sensitive to the morphometry of the lakes. In lakes with extreme morphometry (unequal volumes in depth strata) it is important to use calculated water volumes for the depth strata. By including information derived from the pelagic nets, total lake CPUEs were 42–56% lower than CPUE values based on benthic nets only. We further show that the relative contribution of CPUE between habitats changes markedly with the nutrient level in 12 deep lakes. It is concluded that for deep lakes it is of key importance to include pelagic nets when comparing fish assemblages and abundances among lakes and when evaluating effects of major changes in key environmental factors, such as nutrient loading and climate.     

Ice fishing reveals size structure but not abundance of Eurasian perch in small boreal lakes

Management of inland recreational fisheries would benefit from stock abundance and size structure data. Feasibly standardised angling methods such as ice fishing could produce representative catch-per-unit-effort (CPUE) information on the abundance of different-sized fish in small lakes. Here, we first used standard Nordic multimesh gillnets to obtain number-per-unit-effort (NPUE), biomass-per-unit-effort (BPUE) and size structure data on Eurasian perch (Perca fluviatilis) stocks in 11 small boreal lakes in summer. Second, the same lakes were ice-fished by voluntary anglers using a pre-defined, loosely standardised protocol to obtain angling-based NPUE, BPUE, and length frequency distributions. Effects of environmental variables such as water oxygen concentration and light penetration on angling catch rates were controlled statistically. Neither perch Nordic gillnet NPUE nor BPUE corresponded to ice-fishing CPUEs. However, the length distribution of the catch did not differ between methods. Our results imply that traditional ice fishing applying natural baits is relatively unselective for fish size and could produce valid length-based indicators for management purposes while angling CPUE was poorly related to Nordic gillnet CPUE.     

Habitat and food resource use of perch and roach in a deep mesotrophic reservoir: enough space to avoid competition?

Abstract –  The aim of this study was to test assumptions about the interaction of perch ( Perca fluviatilis L.) and roach ( Rutilus rutilus L.) concerning their food and habitat use in a deep and mesotrophic reservoir. From 1998 to 2001 the fish were caught with gillnets to perform diet analyses. Additionally, vertical gillnets were set to study vertical spatial distribution of both species. The results indicate that in a large and deep reservoir perch and roach are able to avoid competition by separating their niches first in the spatial dimension and then in the dimension of food utilisation. These separations result in low inter- and intraspecific competition of both species. We conclude that these niche separations can widen the juvenile competitive bottleneck to such an extent that the perch are not forced to compete with their older conspecifics during their first year of life, enabling perch to become large and consequently piscivorous.     

Abundance, depth distribution, diet composition and growth of perch (Perca fluviatilis) and burbot (Lota lota) larvae and juveniles in the pelagic zone of Lake Constance

Abstract— Surveys of larval and juvenile fish in the pelagic zone were made in Lake Constance between April and July 1994 with a plankton net. Perch ( Perca fluviatilis ) and burbot ( Lota lota ) were caught persistently, while other species were found only occasionally. Perch and burbot coexisted in the pelagic zone; both species were found first in mid-May, reached peak density in June, and disappeared from the pelagic zone in late July. However, the abundance of perch was much higher than that of burbot. Perch were distributed mainly near the surface, whereas burbot were more abundant at the deeper strata of 5 and 10 m, exhibiting habitat segregation. Perch fed mainly on copepods and positively selected them during their first month of life, and afterwards, they consumed principally on Daphnia , while burbot fed mainly on copepods and positively selected them throughout the study period. Perch grew significantly faster than burbot, and the mean lengths of perch were about 3 times greater than that of burbot in July. The results demonstrate that perch and burbot were the main species of pelagic larvae in Lake Constance between May and July, and that the two species differed somewhat in depth distribution, diet composition and growth.     

A test of crayfish predatory and nonpredatory fish species as bait in crayfish traps

The effectiveness of different crayfish: predatory (pike, Esox lucius L., perch, Perca fluviatilis L.) and nonpredatory [roach, Rutilus rutilus (L.) , and bream, Abramis brama (L.)] fish species as bait for noble crayfish, Astacus astacus L., was tested. Trapping was conducted in two lakes in Norway and Lithuania. Nonpredatory bream and roach were superior as noble crayfish bait compared with predatory perch and pike. In the Norwegian lake bream was also superior to roach. Pike- and perch-baited traps tended to catch larger crayfish than bream- and roach-baited traps. An alarm or avoidance response to different live or dead fish predators (e.g. pike or perch) might exist and could be more pronounced in smaller crayfish, thus explaining that pike and perch as bait catch fewer and larger crayfish. Another explanation could be that the odour of pike and perch flesh is simply less attractive or diffuses more slowly through the water. Selecting the most efficient bait will increase the catch per unit effort (CPUE); in this study there was a four-fold variation in CPUE between the best and worst bait type. In test-fishing/monitoring surveys it is important to standardize the bait type used.     

Habitat distribution of fish in late summer: changes along a nutrient gradient in Danish lakes

Abstract – The horizontal distribution of fish in lakes varies with species, age, predation risk, vegetation coverage and water clarity. Although sporadic data are available for specific lakes, little is known about how habitat distribution generally changes along a gradient in nutrients and clarity. Here we analyse littoral and pelagic fish catch data for 34 Danish lakes (covering 94 lake years) with contrasting total phosphorus (TP) concentrations and mean depth levels (but mainly eutrophic and shallow). Electrofishing was conducted during day along the shore or along the edge of the reed belt if such existed. Gill nets were set overnight for 18 h in open water. We calculated a littoral proportion as: LITPRO = (100 × number caught by electrofishing in the near‐shore area)/(number caught by electrofishing in the near‐shore area and nets in the open water). At all summer TP concentrations LITPRO was high for several ‘littoral’ species such as gudgeon (Gobio gobio), rudd (Scardinius erythrophtalmus) and pike (Esox lucius) and low for more typical pelagic species like pikeperch (Sander lucioperca), ruffe (Gymnocephalus cernuus) and smelt (Osmerus eperlanus). However, for many of these species including the dominant roach (Rutilus rutilus) and perch (Perca fluviatilis) LITPRO increased with TP or lake water chlorophyll a (CHLA) for fish >10 cm, suggesting a more littoral distribution with increasing turbidity. Exceptions are pikeperch and bream (Abramis brama). For bream, LITPRO increased significantly with mean lake depth only. For fish ≤10 cm LITPRO showed only a weak relationship to TP, CHLA or depth. In accordance with the TP‐dependent distribution, major changes occurred in the fish community structure during the monitoring period following nutrient loading reduction. A comparison of LITPRO from the first part of the monitoring period (1989–1993) with a subsequent period (1997–2003) for four abundant species showed a significant decline in LITPRO over time for large‐ and small‐sized roach and perch and large rudd. This suggests a fast response in fish distribution to improved water quality. It further demonstrates that fish monitoring in lakes should cover both littoral and pelagic habitats to describe the recovery process.     

Habitat use of lake trout (Salvelinus namaycush) following species introduction

Abstract – Although introductions of prey species have the potential to significantly alter habitat use by top predatory fish, this aspect has rarely been directly quantified. Introduction of yellow perch (Perca flavescens), a littoral–pelagic prey species, to a small boreal lake previously dominated by littoral cyprinids provided a unique opportunity to examine how a change in forage base influenced habitat use by the sole top predator, lake trout (Salvelinus namaycush). We monitored lake trout pelagic and spatial distribution using acoustic telemetry before (2001) and after (2008) the introduction of perch to determine whether habitat use reflected a deeper, offshore prey community. After accounting for differences in water temperature and dissolved oxygen concentrations between years and the inclusion of a control lake, our data suggest that lake trout habitat use changed after the introduction of yellow perch. Lake trout, on average, were 1.4 m deeper (P < 0.01), reduced their use of littoral habitat by 55% (P = 0.03) and experienced a 71% decrease in home range size (P < 0.01), consistent with a greater offshore habitat overlap between predator and prey after the introduction of yellow perch. This study illustrates how introduced prey species may have a significant influence on habitat use by top predatory fish, while also showing the importance of using direct measurements to quantify behavioural changes.     

Density and temperature dependence of gill net catch per unit effort for perch, Perca fluviatilis, and roach, Rutilus rutilus

Abstract  The densities of perch, Perca fluviatilis L., and roach, Rutilus rutilus (L.), were estimated in six and three lakes, respectively, using mark–recapture and ranged from 25–1064 perch ha⁻¹ and 865–2749 roach ha⁻¹. Effects of fish density, net type and water temperature on catch-per-unit-effort (CPUE) were analysed by generalised linear models (GLM) and generalised additive models (GAM). GAMs were fitted to estimate the simultaneous linear and nonlinear effects of temperature and density on CPUE. These models showed significant nonlinear effects of density on CPUE – mostly for perch, and also for both species at high densities. The models also revealed that both species had distinct density–temperature criteria of expected maximum CPUE and zero CPUE values. Because of the nonlinear relationship between CPUE and density, it was concluded that CPUE should be used with caution as a proxy of density.     

The influence of multiyear drought and associated reduction in tributary connectivity on an adfluvial fish species

Multiyear drought is projected to increase in frequency and duration in arid and semiarid regions across the world, threatening native species and ecosystem function. The effects of multiyear drought are often exacerbated by human water use, which manifest in reduced lake elevation, reduced stream discharge, and disruption in hydrologic connectivity for aquatic species. Here, we demonstrate that drought-driven decreasing lake levels reduce the connectivity between tributaries and lakes by creating an elevation-explicit tributary distance map. We combined long-term fish catch data and a lake elevation time-series with our elevation-explicit tributary distance map to test whether population demographics are related to drought-driven changes in tributary connectivity. We surveyed the littoral zone of Bear Lake, Utah and Idaho, USA, from full pool to a depth of >12 m, totalling 94.86 km² surveyed. As lake elevation decreased from full pool to the lowest historical elevation, tributary channel distance increased by 3.5 km. Bear Lake Bonneville Cutthroat Trout (Oncorhynchus clarkii utah) catch per unit effort was strongly negatively correlated with tributary channel distance, though individual growth rates were not influenced by drought metrics. We predicted the response of age 0 to age 10 cutthroat under high and low cobble availability, estimating up to a 61% decline in cutthroat CPUE when tributary channel distance is at its maximum historical value. Our study provided a unique opportunity to identify quantitative linkages between climate-driven changes in habitat connectivity and an ecologically important endemic sportfish, expanding our understanding of potential pathways through which climate change may affect lentic ecosystems and fishes.     

Damming and seasonality as modulators of fish community structure in a small tributary

River damming alters the physical–chemical variables of water and often causes compartmentalisation of aquatic habitats. Seasonality can add complexity to the longitudinal compartmentalisation. The spatial and temporal effects of these two phenomena on the structure of ichthyofauna from a tributary under the influence of damming were evaluated, based on the following hypotheses: (1) transition habitats have the greatest species richness; (2) community similarity decreases with increasing distance between sites; (3) conservation of free‐flowing areas upstream reservoir contributes to the maintenance of migratory species. To evaluate the effects of these two phenomena, twelve monthly fish samples (September/12 to August/13) were performed with gillnets in three sample areas distributed longitudinally in the tributary. Limnological variables were measured in the same sample areas to confirm compartmentalisation. We observed three distinct limnological compartments (lotic, transition and lentic), with increase differentiation during the rainy season. This compartmentalisation influenced fish fauna where localised communities exhibited different compositions among the three sampled habitats. During the rainy season, these differences become pronounced, with transition habitat showing greater species richness than the others. More pronounced differences in species composition and structure in extremes sampling sites were also observed. Migratory fish presented higher proportion of fish composition in lotic habitat. In conclusion, damming and seasonality acted concomitantly as modulators of fish fauna in a tributary influenced by damming. However, compartmentalisation of habitats was the primary driver of ichthyofauna community structure with the rainy season increasing differences in community composition.     

Habitat partitioning among three predatory fish in a temperate reservoir

The diversity of predatory species plays a key role in ecosystem functioning but our understanding of the mechanisms underlying their coexistence is limited, particularly in freshwater ecosystems. Northern pike Esox lucius, European perch Perca fluviatilis and pikeperch Sander lucioperca are three widespread predatory species in European lakes, where they often coexist. As potential competitors, we hypothesised that partitioning habitat is a determinant of species coexistence. This was tested by quantifying the variability of their habitat use in tracking adult individuals in the Bariousses reservoir (France, 86.6 ha, mean depth 7.1 m). Specifically, we investigated their distribution along the littoral–pelagic and depth axes along the daily cycle and across seasons. From littoral to pelagic waters were first found pike, then perch and finally pikeperch. Pike was the closest to the surface while pikeperch was the deepest. This general pattern was, however, variable across seasons with the three species located in the upper layer in summer during reservoir stratification. Individuals were more evenly distributed along the littoral–pelagic axis and closer to the bottom when water was mixing (autumn, winter). In summer, perch used more intensively in the pelagic zone during the daytime. Other species did not show any diel change of habitats. Our results highlighted that species coexistence is associated with habitat partitioning among these three predators, with perch showing a more variable behaviour regarding habitat characteristics. Now more than ever, in the context of global change which modifies habitats, it is of crucial importance to understand the coexistence mechanisms of species that shape ecosystems.     

水电站影响下太湖西苕溪鱼类产卵生境及其早期资源与环境因子的关系

水利设施运行影响下的鱼类早期资源发生规律被逐渐关注,坝下区域也成为鱼类产卵生境的关注热点。西苕溪作为太湖上游的重要补充支流,是太湖流域鱼类完成生活史过程的重要载体。为解析电站影响下的坝下河流生境变量与鱼类早期资源的内在联系,本研究于2022年4—7月在西苕溪江东电站坝下的东山段开展了持续90 d的鱼类早期资源调查以及时空格局研究。结果显示,该区域鱼卵日平均密度为(0.5±0.7)ind/m3,仔鱼日平均密度为(0.5±0.6) ind/m3。运用形态学结合分子生物学方法进行种类鉴定,共鉴定鱼类35种,隶属4目14科22属,其中产沉性卵鱼类9种,产浮性卵5种,产黏性卵9种,产漂流性卵12种。5月下旬、6月上旬和6月下旬为产卵高峰期。左右岸样线以沉性卵和以水生植物为黏附基质的产黏性卵鱼类为主,河心样线则以产漂流性卵、产黏性卵和浮性卵鱼类为主。该区域鱼类卵苗数量受水温、流速、水位影响较大,水位、流速是影响鱼类繁殖的主要因子,电站调度对卵苗量有显著影响。基于卵苗收获量、卵苗发育时期等结果,判定该采样区域——西苕溪江东电站坝下东山段为适宜多种鱼类繁殖的复合型产卵场,对太湖流域鱼类多样性和渔业资源...     

A comparison of habitat use and habitat-specific feeding efficiency by Eurasian ruffe (Gymnocephalus cernuus) and yellow perch (Perca flavescens)

Abstract –  Eurasian ruffe are invading habitats in the North American Great Lakes watershed occupied by commercially important native yellow perch. We conducted laboratory experiments to evaluate potential overlap in habitat (macrophytes, mud, cobble) and food (benthic invertebrates) use. Ruffe and yellow perch both preferred macrophytes > cobble > mud in the light, but only ruffe increased their use of mud in the dark. Neither fish density nor food availability affected habitat preferences, and competition for habitat was not evident. For both species, feeding rates were marginally lower in macrophytes but did not differ between species. Our experiments suggest that if ruffe and yellow perch share a habitat (e.g., during invasion or because of predation risk), competition for space will be weak or absent. However, within a shared habitat, competition for food may occur when food is limiting because neither species has a clear advantage in its ability to consume invertebrates in any habitat.     

Modelling stream fish species distribution in a river network: the relative effects of temperature versus physical factors

Abstract – The relative influence of temperature versus local physical factors on the spatial distribution of riverine fish species was investigated in a large watershed of south-western France. Using generalised additive models and hierarchical partitioning, we modelled the ecological responses of 28 fish species to a set of five environmental predictors, and we quantified the independent effect of each predictor. The spatial distribution of fish species was primarily determined by both mean temperature and position along the upstream–downstream gradient. However, responses to these environmental factors varied according to the species considered. Fish species with strong thermal requirements (e.g., common carp, black bullhead, Atlantic salmon) were mainly sensitive to temperature whereas longitudinal gradient was of primary importance for downstream species (e.g., common bream, largemouth bass, pike perch). Both the statistical methods used gave concordant results and appeared complementary. This dual-approach, quantifying the relative contribution of each environmental factor, appears particularly useful to understand the spatial distribution of stream fish species. Separating the effects of temperature versus habitat factors is crucial to accurately predict species distribution modifications in the current context of global change.     

The effects of perch, Perca fluviatilis L., and bronze bream, Abramis brama (L.), on insect emergence and benthic invertebrate abundance in experimental ponds

Abstract The effects of perch, Perca fluviatilis L., and bronze bream, Abramis brama (L.), predation on the production of insects emerging at the water surface and the autumn biomass of benthic macro-invertebrates were assessed in a series of experimental ponds. The study attempted to discover whether fish affect food availability for diving and dabbling ducks in freshwater habitats. Ten ponds (bisected by fine netting) were used for the study: one was left totally fish-free, whilst one half of each of three groups of three ponds was stocked with either perch, bream or perch plus bream. The relative abundance of emerging insects (mainly Chironomidae) was significantly reduced in two perch ponds, two perch + bream ponds and two bream ponds. The autumn standing crops of benthic macroinvertebrates were significantly reduced in one perch pond, three bream ponds and one perch plus bream pond. These results support findings of a contemporaneous large bio-manipulation experiment carried out in two adjacent lakes. During the biomanipulation studies, aquatic invertebrate standing stocks greatly increased after the removal of fish and decreased following restocking.     

Growth of 0+ perch (Perca fluviatilis) predating on 0+ bream (Abramis brama)

Abstract – Larvae and juveniles of perch Perca fluviatilis and bream Abramis brama of Lake Speldrop, a highly eutrophicated gravel-pit lake in the floodplain of the Lower Rhine, were used in laboratory experiments to study predation of perch on bream. In the first series of experiments (control), 0+ perch of 30 mm total length (TL) did not prey on 0+ roach of about 24 mm TL. The perch fed only on zooplankton, resulting in low growth rates of 0.17 mm  ·  day⁻¹. In the second series of experiments, perch (30 mm TL) were combined with 0+ bream with an average TL of 14 and 19 mm at different ratios. As in the first series, even a nine-fold higher amount of zooplankton food had no significant influence on the growth rate of perch, regardless of the perch:bream ratio. At a perch: bream ratio of 7:1 and 4:4 all bream were eaten by the perch and restocked twice daily. At the end of the experiment, the TL of perch at a perch:bream ratio of 7:1 was significantly lower compared to a perch:bream ratio of 4:4 (mean growth rates at 7:1 of 0.16 mm  ·  day⁻¹ and at 4:4 of 0.35 mm  ·  day⁻¹). At the perch:bream ratio of 1:7, perch fed on bream in varying amounts, averaging between 3 and 12 bream per day and per individual. After 20 days, the final length of these fish was always significantly higher than the TL of perch at other perch:bream ratios and increased in correlation to number of bream eaten per day (mean growth rate 1.13 mm  ·  day⁻¹). The results are discussed with respect to the piscivore-dominated fish community of the eutrophied Lake Speldrop. ^Note     

Influence of aquatic plant‐specific habitat on an assemblage of small neotropical floodplain fishes

Dibble ED, Pelicice FM. Influence of aquatic plant‐specific habitat on an assemblage of small neotropical floodplain fishes.
Ecology of Freshwater Fish 2010: 19: 381–389. © 2010 John Wiley & Sons A/S Abstract – This study investigated the effects of plant‐specific habitat on the distribution of young and small adult fishes in lagoons of the Upper Paraná River floodplain, Brazil. We compared fish catch per unit effort (CPUE) and species richness and used an indirect gradient analysis to investigate fish‐plant relationships within three aquatic macrophytes beds (Cabomba furcata, Eichhornia azurea, Nymphaea amazonum), and explored microhabitat influence (indexed by eight variables related to physical structure and water quality) on the structure of fish assemblages. Rarefaction analysis was used to compare fish species richness among the vegetated habitats. We captured a total of 1599 fish constituting 23 species, 7 families and 3 orders. Fish CPUE and species richness increased relative to microhabitat structure innate to the macrophytes; higher CPUE and richness were observed in C. furcata beds, a submerged aquatic macrophyte with finely dissected leaves. On the contrary, N. amazonum, a species that provides low microhabitat complexity, harbored fewer individual fish and number of species. Reproduction dynamics, hydrology and the amount of available plant‐generated habitat structure (surface effect) contributed to the disproportionally high number of individuals captured during the dry season. Our data suggest that the microhabitat physical structure (e.g., edge distance, stem density and patch size) provided by macrophyte beds in the lagoons of the Upper Paraná River may play a more important role than physicochemistry (e.g., oxygen, temperature and pH) at mediating distribution patterns of small‐sized fishes.     

Habitat use of age 0 Alabama shad in the Pascagoula River drainage, USA

Mickle PF, Schaefer JF, Adams SB, Kreiser BR. Habitat use of age 0 Alabama shad in the Pascagoula River drainage, USA. Ecology of Freshwater Fish 2010: 19: 107–115. © 2009 John Wiley & Sons A/S
Abstract – Alabama shad ( Alosa alabamae ) is an anadromous species that spawns in Gulf of Mexico drainages and is a NOAA Fisheries Species of Concern. Habitat degradation and barriers to migration are considered contributing factors to range contraction that has left just the Pascagoula River drainage population in Mississippi. We studied juvenile life history and autecology in three rivers within the drainage. We collected fish, habitat and physicochemical data in three habitat types (sandbar, open channel and bank) from June to October 2004–2006. Sandbar habitat was favoured by smaller individuals early in the year. Catch per unit effort (CPUE) decreased through the summer as larger fish began occupying bank and open channel habitat. The most parsimonious model of abundance included year and river variables, while patterns of presence and absence were best explained by river, habitat type and physiochemical variables. While all three rivers in the drainage contained Alabama shad, fish were less abundant and had lower condition values in the Chickasawhay River. Earlier work suggested the Alabama shad may gradually move downstream towards the Gulf of Mexico in their first year. However, we found no evidence of this and captured large fish high in the drainage late in the year.