Comparative population structure and reproductive biology of the critically endangered shrub Grevillea althoferorum and two closely related more common congeners

Grevillea althoferorum is a critically endangered, sprouting shrub known from two disjunct populations within the South-West Botanical Province of Western Australia. This study compares the conservation biology of G. althoferorum and two closely related but more common congeners, the non-sprouter G. rudis and the sprouter G. synapheae subsp. pachyphylla in order to determine whether there are differences in reproductive and ecological attributes that might explain why G. althoferorum is rare. In contrast to the more common species, neither population of G. althoferorum exhibited evidence of seedling recruitment. However, the northern population was confirmed to be clonal and was actively recruiting from root suckers. Both populations of G. althoferorum were found to have reduced amounts of viable pollen on stigmas in comparison with the other species. The fruit set at the southern population of G. althoferorum was considerably lower than that found for the common species, with only 0.15% of flowers setting fruit and no fruit was produced in the northern population. In addition no evidence of a soil seed bank was found for either population of G. althoferorum, but G. rudis and G. synapheae subsp. pachyphylla both had soil stored seed which germinated following treatment with aqueous smoke solution. Sexual recruitment at both populations of G. althoferorum was absent, and reproduction appears to be predominantly clonal in the northern population. Management strategies for G. althoferorum should therefore focus on the protection of adult plants from accidental destruction.     

Population viability of Cape mountain zebra in Gamka Mountain Nature Reserve, South Africa: the influence of habitat and fire

The small Cape mountain zebra population in Gamka Mountain Nature Reserve represents a third of the entire gene pool of this endangered species and is thus vital for it’s conservation. Presently, management of this population is largely hands off, with the belief that it will grow to levels which will allow it to form a source for the mixing of mountain zebra stocks in the future. The growth of this population however, has been slow and we investigated the influence of habitat and fire on this growth. Firstly, we used a diffusion model to perform a population viability analysis. This analysis indicated that the population had a low probability of attaining quasi-extinction in the next 50 years (G = 0.0032). However, our findings indicated that less than 30% of the reserve was suitable for mountain zebra and that the preferred habitat would have to be burnt at unnaturally short intervals to sustain the present growth. We therefore argue that the risk of quasi-extinction to this population is greater than predicted and suggest that management options need to be implemented to reduce this risk. These options include; translocation to another protected area; acquisition of adjacent land; burning preferred habitat at unnaturally short intervals; forming a conservancy with adjacent landowners; leasing cultivated land for pasture. We suggest that only the latter two options are likely to stimulate mountain zebra population growth in the short term and that these should receive immediate attention.     

Conservation of the critically endangered Rumex rothschildianus as implied from AFLP diversity

Rumex rothschildianus (Polygonaceae) is a small dioecious annual endemic to the central coastal plain of Israel. This very rare sorrel is on the verge of global extinction, as its total gene pool consists of two surviving populations only: one small and the other relatively large and flourishing. The other ten populations of this species recorded during the 20th century (all in Israel) are now extinct. Amplified fragment length polymorphism (AFLP) markers were used to evaluate the population genetic structure of the two remaining populations. Genetic diversity in R. rothschildianus was H=0.17 with 48.9% polymorphic loci. Gene flow values suggest that the differentiation between the two populations is moderate (mean F_st=0.09). Considering these genetic data, two conservation management strategies should be applied: (1) Large scale reseeding in a neighbouring nature reserve to maintain the genetic diversity detected in this study. Seeds from diverse sources should be used for repeated reseedings in order to prevent the reintroduced populations from going through a genetic bottleneck or suffering genetic drift. (2) To maintain the genetic diversity in the two remaining wild populations, and to avoid risks such as possible outbreeding depression, only intrapopulation reinforcement should be considered. These populations should be carefully monitored and protected.     

Rainfall and the decline of a rare antelope, the tsessebe (Damaliscus lunatus lunatus), in Kruger National Park, South Africa

The number of tsessebes in Kruger National Park, South Africa, increased during 1977-1985, but declined after 1986. We used tsessebe number and age structure to determine year-to-year variation in adult survival. Adult survival rate was positively correlated with dry-season rainfall (a measure of grass productivity during the dry season) and with the cumulative rainfall surplus. Juvenile survival rate (as indexed by the juvenile:female ratio) was also correlated with the cumulative rainfall surplus. Tsessebe feed in broad, grass-covered drainage lines within Colophospermum mopane shrubland on basaltic soils. Here drainage is slow and the cumulative rainfall surplus or deficit, relative to the mean annual rainfall, is an index of dry-season soil moisture, which, in turn, determines dry-season grass productivity and hence the food supply for tsessebe. Adult survival rate was density-dependent, indicating that there was intraspecific competition for food. When the relationships between survival rates and rainfall were used in a model of tsessebe population dynamics to predict juvenile and adult survival rates from the recorded annual and dry-season rainfalls, the modelled population changes were similar to those observed. We conclude that changes in tsessebe numbers probably resulted from rainfall-induced changes in food availability during the dry season, which caused adult survival to decline after 1986. The principal management implication is that the tsessebe decline can be reversed only by several successive years of above-average annual rainfall. The importance of green grass during the dry season as a key resource is emphasised, not only for tsessebe, but also for other African antelopes that graze selectively.     

Herbicides, weeds and endangered species: management of bitou bush (Chrysanthemoides monilifera ssp. rotundata) with glyphosate and impacts on the endangered shrub, Pimelea spicata

Environmental weed invasion threatens the biodiversity of native species. Unfortunately, managing these weeds may also affect biodiversity adversely. A recent example occurred when glyphosate, a herbicide used to control the highly invasive weed, bitou bush (Chrysanthemoides monilifera ssp. rotundata), accidentally drifted over a small population of an endangered shrub, Pimelea spicata. Following concerns that the affected population would not recover and, thereby, cause the local extinction of P. spicata, we conducted a series of glasshouse and field experiments to explore the impacts of glyphosate on this endangered species. Seedlings and young plants of P. spicata, in which the tap root was undeveloped, were killed by a single application of glyphosate. Older plants with a well developed tap root also died back initially, but about 50% of individuals re-sprouted. This re-growth was associated with a significant decrease in tap root diameter, implying that further disturbance, including repeated treatment with glyphosate, would kill plants by impairing their potential for recovery. Unlike some sclerophyllous native shrubs, the tolerance of P. spicata to glyphosate was limited, even when its growth was slowed artificially by limiting water availability. Winter applications of glyphosate to manage infestations of bitou bush will impact adversely on populations of P. spicata and may also affect the other rare and endangered species whose survival is threatened by this species, even though some natives are unaffected by the herbicide. Protecting native biodiversity from bitou bush will involve sustainable weed management that minimises impacts on non-target native species.     

Consequences of the spatial configuration of resources for the distribution and dynamics of the endangered Parnassius apollo butterfly

Based on several years of data from two populations of the endangered Apollo butterfly (Parnassius apollo, L. 1758), we study how the amount and spatial location of patches of larval (host-plant) and adult (nectar plant) resources affects the distribution of females and their larval offspring in the following year. In the coastal population (nectar-plant and host-plant patches spatially segregated), females moved frequently between patches to aggregate on larger host-plant patches close to nectar-plant patches. In the archipelago population (where nectar-plants and host-plants co-occur), the abundance of females increased with higher proximity to other host-plant patches and with more nectar-plants on the patch. Next year’s larval abundance correlated with the abundance of females in the previous season in both populations. A model of the population dynamics in the two populations in relation to the spatial configuration of nectar and host-plant patches showed that the spatial configuration of larval and adult resources had population-dynamical consequences. In many organisms, different life-history stages use different resources. Incorporation of information on the location and abundance of adult resources can provide additional insight for the suitability of a particular landscape in harbouring a population.     

Extreme population divergence and conservation implications for the rare endangered Atlantic Forest sloth, Bradypus torquatus (Pilosa: Bradypodidae)

The maned sloth (Bradypus torquatus) is an endangered species endemic to the Atlantic Forest of eastern Brazil. This biome has been reduced to 7% of its original extent and the remaining forests are highly fragmented. We analyzed 70 samples from the largest remnant populations in the states of Bahia, Espírito Santo and Rio de Janeiro to characterize their geographic structure and to produce estimates of genetic diversity. The analysis indicated that the remnant populations are reproductively isolated and extremely divergent. The populations present a very discontinuous distribution, with divergent genetic clusters specific to different geographical regions, probably caused by allopatric fragmentation. This pattern is likely related to Pleistocenic climatic and vegetation changes, and indicates the presence of at least two independent evolutionary units. The analyses also indicate that populations separated by more than 100 km should be considered different management units. Thus, devastation of the Atlantic Forest leads to an unrecoverable loss of genetic diversity in this species. These conclusions should direct conservation actions aimed at preserving the distinctiveness of each evolutionary unit, as well as to preserve the demographic isolation of different management units.     

Population viability of the narrow endemic Helianthemum juliae (CISTACEAE) in relation to climate variability

Narrow endemic plants are highly vulnerable to extinction as a result of human disturbance and climate change. We investigated the factors affecting the population viability of Helianthemum juliae, a perennial plant endemic to the Teide National Park on Tenerife, Canary Islands. One population was demographically monitored from 1992 to 2001 and analysed using matrix projection models to determine finite rates of increase and critical stages in the life cycle. Lambda values varied between 0.697 and 1.740, and were highly positively correlated with annual precipitation, but not with temperature. Survival of adults had the highest elasticity, and summed elasticities of the growth and fecundity transitions correlated positively with lambda and precipitation. Most of the mortality in the population seemed drought-related, and no other threats were identified. Deterministic simulations showed population increase, but introducing environmental stochasticity by modelling variation in precipitation from existing data of the past 85 years revealed high extinction probabilities (0.74-0.83 in the next 100 years). This plant is likely to be at risk under scenarios of global warming. Our simulations suggest that augmenting the population would only delay extinction. A more viable option for long-term conservation seems to be the introduction of populations at more humid locations within the Teide caldera.     

Extrinsic and intrinsic controls on the distribution of the critically endangered cress, Ischnocarpus exilis (Brassicaceae)

Ischnocarpus exilis, a critically endangered cress, persists in one small population in a 1m² section of a limestone tower in the South Island, New Zealand. The importance of intrinsic (seed production, dispersal ability and habitat specificity) and extrinsic factors (weed competition) acting to restrict the distribution of this threatened species were investigated with a field experiment, demographic monitoring and soil seed bank analysis. I. exilis is not confined to its present site because of high habitat specificity, but rather is limited by low seed production and limited dispersal as well as by competition with invasive weeds. Conservation management of this critically endangered species should focus on controlling weeds and on establishing new populations in suitable weed-free habitat.     

The impact of clonality on an endangered tree (Elaeocarpus williamsianus) in a fragmented rainforest

The occurrence and distribution of clonality in the endangered rainforest tree Elaeocarpus williamsianus (Elaeocarpaceae) was investigated using SSR and RAPD analyses for 170 apparent individual trees found across seven sites. The results obtained with the two molecular techniques were in complete agreement in showing that single clones are present in most of the E. williamsianus sites with two genets occurring at the largest and most adequately protected site. In addition, seed production, viability and germinability were determined for four of these populations. Fruit were produced in all four populations tested although sterile fruit were very common. Only two E. williamsianus trees representing different genets within the same site produced viable seed. The overall genetic diversity within E. williamsianus is much lower than expected and thus the potential for sexual reproduction has been significantly diminished. It is concluded that habitat fragmentation removed an existing balance between vegetative and sexual reproduction in this species. Such findings have added urgency to the management of this species which could include a reintroduction program incorporating the collation of all clones within selected sites.     

Epidemiology and conservation implications of Trichomonas gallinae infection in the endangered Mauritian pink pigeon

Despite increasing recognition of the role of exotic pathogens in species decline, comprehensive studies of wildlife disease epidemiology in threatened species are rare. We investigated the epidemiology of the protozoan parasite Trichomonas gallinae, which causes the avian disease trichomonosis, in the five wild subpopulations of the endangered pink pigeon Columba mayeri in Mauritius. An average of 89% of the entire population was screened for T. gallinae infection every 2 months between September 2002 and April 2004. A total of 426 individual pink pigeons (all >3 months of age) was screened, and 359 (84.3%) of these tested positive for T. gallinae at least once. Average prevalence of T. gallinae infection across all subpopulations and sampling periods was 50.3% but ranged from 19.6% to 82.4%. Trichomonas gallinae infection was significantly different among subpopulations and prevalence gradually decreased over the entire screening period. Infection prevalence also increased with host age. Observed pathogenicity of T. gallinae was low; active trichomonosis signs were recorded in ca. 1.9% of birds which tested positive. However, birds which persistently tested positive for T. gallinae (33.5% of birds screened) were at least 10% less likely to survive 2 yrs post-screening than birds which tested negative at least once in three consecutive periods; a finding which should be considered by wildlife disease investigators if no pathogenic effects are apparent from the results of studies based on a single screening episode. We conclude that T. gallinae is an additional population limiting factor for pink pigeons and our study highlights the importance of screening other endangered columbids for this pathogen.     

Development, fatty acid composition, and storage of drupes and seeds from the endangered pondberry (Lindera melissifolia)

Pondberry (Lindera melissifolia [Walt.] Blume: Lauraceae) is an endangered, dioecious, clonal shrub that grows in bottomland hardwood forests in the southeastern United States. Prior work has emphasized vegetative reproduction associated with the clonal nature of this species. Little has been published about the early morphological and biochemical characteristics of the fruit as they mature. Fruits, drupes originating from the axillary buds, were collected every 30 days after anthesis and examined for seed structure development and fatty acid composition of the fruit and seed. Sixty days after anthesis, fruits had not formed an organized embryo/cotyledon, weighed 0.1 ± 0.001 g, and measured 7.1 ± 0.04 mm × 4.3 ± 0.03 mm. Ninety days after anthesis, a complete seed had formed within the drupe. Of the total drupe weight (average 0.23 ± 0.01 g), the seed comprised 33% of the mass gained from 60 days after anthesis. Overall composition of the seed and pulp lipids changed significantly over the course of development. Myristic, palmitic, steric, oleic, linoleic, and linolenic fatty acids were revealed by the lipid analyses. Lauric acid was not found in any of the early seed lipid samples but it increased in quantity as seed matured to become the dominant fatty acid in this tissue. Conversely, pulp contained only small amounts of lauric acid; its fatty acid profile was dominated by oleic acid. Fully hydrated seeds stored well for 16 months at both 4 °C and −2 °C. Although drying had a deleterious effect on germination when dried seeds were conventionally stored at 4 °C, seeds that had been dried for 24 h to a moisture content of 8.6% were successfully stored in liquid nitrogen.     

Decline and likely extinction of a northern Australian native rodent, the Brush-tailed Rabbit-rat Conilurus penicillatus

Contemporary fire patterns are considered the most likely cause for regional population decline amongst small to medium mammals in northern tropical Australia. Here we assess the extinction risk faced by a vulnerable north Australian native rodent, the Brush-tailed Rabbit-rat Conilurus penicillatus in relation to fire frequency. This species has recently suffered a significant contraction in range. We provide the first quantitative evidence to demonstrate the immediate threat destructive wildfires and regular annual fire pose to the long-term population persistence of C. penicillatus. We show that late-dry season fires cause a reduction in both juvenile and adult survival probabilities. However, abundance declined at the unburnt as well as a frequently burnt site, suggesting that fire exclusion alone does not guarantee the species’ long-term persistence. Our model projections indicate that the remaining populations of C. penicillatus on the Northern Territory mainland risk extirpation within the next ten years. Conservation requires decisive management action to ameliorate extensive and destructive fires. A multi-faceted management plan needs to focus on restoring a fire management regime which generates a fine-scale mosaic of burnt and unburnt habitat, and the release of captive bred animals into fenced reserves free of exotic predators.     

Impacts of chronic marine oil pollution and the murre hunt in Newfoundland on thick-billed murre Uria lomvia populations in the eastern Canadian Arctic

We developed a deterministic and stochastic age-based matrix projection population model to assess and quantify the impact of mortality caused by chronic oil pollution and legal hunting on thick-billed murre Uria lomvia populations breeding and wintering in eastern Canada. We calculate the potential population growth rate in the absence of anthropogenic mortality sources using a modeling technique that translates absolute number of birds killed from anthropogenic mortality to potential survival rates in the absence of these anthropogenic impacts. The intrinsic growth rate of the deterministic matrix based on vital rates from Coats Island (λ_d=1.0102), as well as the stochastic growth rate (λ_s=1.0098, 95% C.I. 0.9969-1.0226), matched observed population trends. Hunting mortality reduced population growth rate by 0.020 (0.012-0.039), oiling mortality reduced population growth rate by 0.025 (0.012-0.039). Combined these sources reduced the population growth rate by 0.047 (0.033-0.610). Although thick-billed murre populations are stable or slowly growing in eastern Canada, anthropogenic sources of mortality are reducing the ability of the population to grow, and increase vulnerability in these populations to changes in their environment and other pulse perturbations. Our modeling technique could be used to assess specific anthropogenic impacts on populations where a vital rates and numbers killed are known, but no long-term trend information is available.     

Environmental change hastens the demise of the critically endangered riverine rabbit (Bunolagus monticularis)

Declining population numbers coupled with the growing evidence of global change have focussed attention on the critically endangered riverine rabbit (Bunolagus monticularis) endemic to South Africa. The aim of this study is to develop a habitat model to aid in the identification of isolated populations, offer opportunities for re-introduction or introduction, and guide future conservation efforts by assessing the possible impacts of global change. We attempt a novel approach where plant species which afford the riverine rabbit cover from predation and its primary food sources are modelled utilising the same technique and are included as a predictor variable in the habitat model for both current and future projections of potential habitat. Inclusion of this proximal variable as well as riparian areas yields a more parsimonious habitat model than using climatic variables alone. Results suggest that unsurveyed suitable habitat east of Victoria West might harbour previously overlooked isolated populations or offer new opportunities for re-introductions. Future climatic conditions under the most severe general circulation model for the region (HADCM3) suggest that, on average, in excess of 96% of the current habitat could become unsuitable, mitigated only slightly by a possible 7% increase in range in adjacent upper catchment areas. Consideration of existing land transformation increases this range reduction by a further 1%. Given that ex situ captive breeding programmes have met with no success and that the bulk of future potential range lies well outside of the currently known and surveyed areas the current adaptation options of conservancy establishment and captive breeding need to be re-evaluated. Without positive human intervention the future of the critically endangered riverine rabbit under conditions of global change seems certain.     

Microsatellite analysis of genetic population structure of the endangered cyprinid Anaecypris hispanica in Portugal: implications for conservation

The endangered fish species Anaecypris hispanica is restricted to eight disjunct populations in the Portuguese Guadiana drainage. The genetic structure of these populations was studied in order to determine levels of genetic variation within and among populations and suggest implications for conservation of the species. Based on five microsatellite loci, the null hypothesis of population homogeneity was tested. Tests for genetic differentiation revealed highly significant differences for pairwise comparisons between all populations, and substantial overall population subdivision (F_ST=0.112). All sampled populations contained unique alleles. Our findings indicate marked genetic structuring and emphasise limited dispersal ability. The high levels of genetic diversity detected within and among A. hispanica populations suggest, however, that the observed fragmentation and reduction in population size of some populations during the last two decades, has impacted little on levels of genetic variability. Data imply that most A. hispanica populations should be managed as distinct units and that each has a high conservation value containing unique genetic variation. It is argued that geographic patterns of genetic structuring indicate the existence of eight management units.     

Dogs on the catwalk: Modelling re-introduction and translocation of endangered wild dogs in South Africa

In South Africa, a plan was launched to manage separate sub-populations of endangered African wild dogs (Lycaon pictus) in several small, geographically isolated conservation areas as a single meta-population. This intensive management approach involves the re-introduction of wild dogs into suitable conservation areas and periodic translocations among them. Despite the initial failures and high costs associated with wild dog re-introductions and translocations, there is no predictive framework available to quantify which management protocol is the most efficient. We therefore developed an individual-based model of wild dog population and pack dynamics, which accounts for the wild dogs’ social complexity. The model appeared to capture the essential characteristics of a real wild dog population from Hluhluwe-iMfolozi Park, South Africa and to be relatively robust to parameter uncertainty, suggesting that the model is valid enough for addressing management problems. The model enabled us to quantify a critical initial number of packs (two) and individuals per pack (six) necessary for a re-introduced wild dog population to establish itself in the release area. We also found a practically feasible intervention regime at which a re-introduced wild dog population had the best chance of persistence: intermittently adding packs (at least every 6 years) and harvesting disperser groups (as often as every 4 years) for translocation to other release sites, without threatening the small source population. This study demonstrates that individual-based models can be a powerful decision-support tool in re-introduction planning and provides insight into how populations made up of social groups have dynamics, and ultimately persistence, determined by individual behaviour.     

Seed germination and conservation of endangered species from the Italian Alps: Physoplexis comosa and Primula glaucescens

Physoplexis comosa and Primula glaucescens, endemic to calcareous grasslands of the Lombardy Prealps, northern Italy, are protected under Annex IV of European Community Directive 92/43/EEC. Seed germination dynamics of these species were studied with the aim of producing appropriate germination protocols for use in ex situ conservation. Seeds were collected from Monte Barro (922 m a.s.l.) and for Primula glaucescens from three additional sites in a more central part of its range (1217-2521 m a.s.l.). Physoplexis comosa germinated only in sterile in vitro conditions, in which germination percentages were extremely low without a supply of gibberellic acid (GA3; 1.7%); the optimum GA3 concentration was 100 mg l⁻¹ (> 90% germination), with lower germination at higher doses of 250-500 mg l⁻¹. Primula glaucescens germinated in both sterile and non-sterile conditions and, although total germination was not affected by GA3 concentration, doses of 10-500 mg l⁻¹ acted equally to prompt earlier and more rapid germination. Primula glaucescens from Monte Barro was characterised by slower and poorer germination than from central sites.     

Anthropogenic and natural disturbance lead to differing patterns of gene flow in the Rocky Mountain tailed frog, Ascaphus montanus

Understanding the influence of habitat alteration on population structure and persistence is critical for effective conservation strategies. Timber harvest and wildfire are two of the most prevalent disturbances across temperate forests, yet the long-term effects of these two forces on population connectivity have rarely been studied. We studied populations of the Rocky Mountain tailed frog (Ascaphus montanus) across landscapes that have experienced either timber harvest or broad scale fires. Rocky Mountain tailed frogs generally require forested habitat, and are a species of concern in managed forests. We used landscape genetic techniques to test the explanatory power of alternative paths of connectivity across both burned and harvested forests and identified topographical and climatic variables that significantly influenced gene flow. We found that timber harvest and fire led to different patterns of genetic connectivity. Widespread terrestrial gene flow was maintained across previously burned areas and connectivity was primarily limited by solar radiation. In contrast, gene flow among populations in managed forests followed riparian corridors, presumably to avoid the loss of cover due to timber harvest. Gene flow along riparian corridors in Rocky Mountain tailed frogs differs from a population of the closely related coastal tailed frog (Ascaphus truei), for which gene flow appears to occur primarily over land. These results suggest management of Rocky Mountain tailed frogs should focus on maintaining riparian buffer zones, which may be less effective for the coastal species. Thus, consideration of landscape differences is essential even for conservation of closely related, morphologically similar species.