Molecular Characterization of Local Spanish Peach [Prunus persica (L.) Batsch] Germplasm

A collection of 85 local Spanish peach cultivars has been studied with SSR markers. To carry out this work 42 SSRs previously developed in peach were screened to select the microsatellite loci that presented high polymorphism and that were easier to score in high resolution agarose gels. Ten SSRs were selected to identify the peach cultivars and to estimate the genetic similarity among them. The selected microsatellites resulted in the amplification of 35 fragments in the 85 genotypes studied, differentiating 46 genotypic profiles, from which 31 correspond to unique cultivars. The rest of the profiles correspond to groups of two to five cultivars and one group of 17 undistinguishable cultivars. The genetic similarity estimated from the molecular data clearly separated the flat and most of the white-fleshed peaches from the rest of genotypes that are mostly yellow non-melting local peaches. The results obtained in this work will help to improve the conservation and management of local Spanish peach germplasm allowing the establishment of core collections that represent most of the diversity conserved.     

Chloroplast DNA study in sweet cherry cultivars (Prunus avium L.) using PCR-RFLP method

The chloroplast DNA of 96 sweet cherry cultivars (Prunus avium L.) and five cultivars of sour cherry (P. cerasus L.) were analysed to reveal their haplotypes using PCR-RFLP (Polymerase Chain Reaction - Restriction Fragment Length Polymorphism) method. The main advantages of the PCR-RFLP technique are: resolutive, time and cost effective and reproducible. Approximately 9.6% of the chloroplast genome was analysed, using six universal primer pairs and two restriction enzymes. All the mutations detected were insertion-deletions, ranging between 5–30 bp. The combination of all the mutations resulted in three haplotypes (H1, H2 and H3) in the 96 sweet cherry cultivars and a single haplotype (H4) in the five cultivars of sour cherry. The cpDNA polymorphism determined by PCR-RFLP markers helped to understand the maternal inheritance of chloroplast genome in sweet cherry, clearly distinguished the sour from the sweet cherry, and supported that P. avium is not the maternal species of P. cerasus.     

Identification of sweet cherry cultivars (Prunus avium L.) and analysis of their genetic relationships by chloroplast sequence-characterised amplified regions (cpSCAR)

Ten cpSCAR markers that show polymorphism in Prunus avium were used to fingerprint sweet cherry cultivars. The purpose of the study was also to contribute to identification and to help determine their genetic interrelationships. Samples of ‘0900 Ziraat’, a superior Turkish variety, which were collected in several locations all over Turkey, had identical cpSCAR patterns, and they resembled a common European haplotype, A. ‘Sweetheart’, ‘Summit’ and ‘Canada Giant’ and their haplotype are intermediate between the previously described haplotypes A and B, which were originally found in Central and Eastern European sweet and wild cherries, and those from Northern Turkey, respectively. The data therefore suggests a local maternal descent (within Europe and Asia Minor) of the cultivars analysed. Our results show that chloroplast DNA analysis is a straightforward way to classify cherry cultivars. We compare our results to others previously reported for sweet cherry cultivars, and conclude that cpSCAR diversity data could be considered for phylogenetic studies in this group.     

In vitro bioavailability of phenolic compounds from five cultivars of frozen sweet cherries (Prunus avium L.)

The bioavailability of phenolic compounds from five cultivars of frozen sweet cherries was assessed by a digestion process involving pepsin-HCl digestion (to simulate gastric digestion) and pancreatin digestion with bile salts (to simulate small intestine conditions) and dialyzed to assess serum- and colon-available fractions. After pepsin digestion, the % recovery of total phenolics, relative to the original starting material, increased, whereas the % anthocyanins did not change. Following pancreatic digestion and dialysis, the total phenolics in the IN (serum-available) fraction was about 26-30% and the OUT (colon-available) fraction was about 77-101%. The anthocyanin content in the IN fraction was 15-21%, and in the OUT fraction, it was 52-67%. Skeena, Lapins, and Sweetheart cultivars contained higher levels of total phenolics and anthocyanins, which resulted in higher concentrations of these compounds in the IN and OUT fractions. The potential bioavailability of phenolic compounds was also assessed in Bing and Lapins cultivars at three ripening stages. Immature cherries had higher % total phenolics in the IN fraction than mature or overmature cherries. However, immature cherries had the lowest concentrations of these compounds, making the actual bioavailable amounts of these compounds lower than for mature and overmature fruit. High-performance liquid chromatography analysis of Lapins cherries at three maturity stages confirmed the results obtained using spectrophotometric methods for total phenolics and anthocyanins.     

热水结合维生素C处理对甜樱桃果实褐变的控制研究

在预试验基础上,甜樱桃果实采用42℃热水及42℃热水添加0.1%维生素C各处理10 min,在0±0.5℃,相对湿度为85%~90%的条件下贮藏18 d后,再置于24±1℃,相对湿度为65%~70%条件下存放2 d,对果实的褐变参数及相关酶活性进行检测。结果表明,热水处理明显抑制甜樱桃果实L^*和H⁰值的下降及苯丙氨酸解氨酶(PAL)、多酚氧化酶(PPO)和过氧化物酶(POD)活性的上升。热水添加维生素C处理强化了这一抑制效果。贮藏后,热水和热水添加维生素C处理的果实感官综合评分分别为6.9和7.5,而对照仅为5.7。相关分析表明,感官综合评分与L^*、b^*和H⁰呈显著正相关,与a^*、PPO和POD活性呈显著负相关(P<0.05)。     

Level and Transmission of Genetic Heterozygosity in Apricot (Prunus armeniaca L.) Explored Using Simple Sequence Repeat Markers

In this study, 17 peach simple sequence repeat (SSR) sequences were used in the exploration of the genetic heterozygosity level of several apricot cultivars from Spain, France, Greece, and the USA, and 23 descendants. The genotypes can be classified in three groups as a function of their genetic heterozygosity (1) local cultivars from Murcia (Spain) (‘Gitanos’ and ‘Pepito del Rubio’) and several descendants from crosses among these cultivars, with very low genetic heterozygosities (less than 0.30); (2) cultivars from France and Spain (‘Moniquí’, ‘Currot’ and ‘Bergeron’) and several descendants, with intermediate levels of genetic heterozygosity (around 0.45); and (3) cultivars ‘Orange Red’ and ‘Goldrich’ from North America and ‘Lito’ from Greece, with the remaining descendants, having genetic heterozygosities higher than 0.50. The results showed the high increase of genetic heterozygosity in the case of descendants from complementary crosses. The use of cultivars from North America could increase greatly the genetic heterozygosity in the Spanish apricot breeding programs, enlarging the genetic variability of the local cultivars. On the other hand, in the case of transgressive crosses among local Spanish cultivars, the increase of genetic heterozygosity was much lower.     

Water uptake through sweet cherry (Prunus avium L.) fruit pedicels: Influence of fruit surface water status and intact fruit skin

A modified potometer consisting of a water-filled glass tube mounted in parallel with a metric scale and connected to a fruit was used to study water uptake into detached fruits of sweet cherry. Results describing quantities of imported water from some introductory studies were in the same range as in previously published studies conducted with alternative methods. Water uptake was measured in fruits of four cultivars kept in air of approximately 50±5% RH followed by immersion in water 1–2 h into the experimental period. This caused a significant decrease in water uptake. However, the fruits continued to accumulate water at a reduced rate. When the fruits were dried, the water uptake immediately increased to the same level as before the immersion in water. The fruit skin of two cultivars was exposed to normal air after being ruptured with four shallow cuts to simulate cuticular fractures or shallow cracks. These two treatments did not give statistically different water uptake through the pedicel, although there was a tendency to an increased rate of water uptake in fruits with ruptured fruit skin.     

Assessing genetic diversity of sweet potato (Ipomoea batatas (L.) Lam.) cultivars from tropical America using AFLP

The sweet potato genebank at the International Potato Center (CIP) maintains 5,526 cultivated I. batatas accessions from 57 countries. Knowledge of the genetic structure in this collection is essential for rational germplasm conservation and utilization. Sixty-nine sweet potato cultivars from 4 geographical regions (including 13 countries) of Latin America were randomly sampled and fingerprinted using AFLP markers. A total of 210 polymorphic and clearly scorable fragments were generated. A geographic pattern of diversity distribution was revealed by mean similarity, multidimensional scaling (MDS), and analysis of molecular variance (AMOVA). The highest genetic diversity was found in Central America, whereas the lowest was in Peru-Ecuador. The within-region variation was the major source of molecular variance. The between-regions variation, although it only explains 10.0% of the total diversity, is statistically significant. Cultivars from Peru-Ecuador, with the lowest level of within region diversity, made the most significant contribution to the between region differentiation. These results support the hypothesis that Central America is the primary center of diversity and most likely the center of origin of sweet potato. Peru-Ecuador should be considered as a secondary center of sweet potato diversity.     

The effect of potassium soil amendments,trenching and foliar sprays on the mineral content,growth, yield and fruit quality of sweet cherry (Prunus avium L.) and prune (Prunus domestica L.)

Abstract

Potassium sulfate was applied to established, non‐irrigated, K deficient trees on fine textured soil by banding, placing in augered holes and injecting into the soil. Additional trees received a heavy compost mulch in early fall. Trenches were dug in the fall beside trees to break roots and then were backfilled with K₂SO₄, dolomite lime or a combination of the two. One percent K solutions of KNO₃ or K₂SO₄ were sprayed on trees four times during the growth season.

Sweet cherry trees only responded to compost mulch applications within two years. August midshoot leaf K, leaf N and fruit size were increased within one year however tree growth and yield were not affected. Fruit size and shoot growth were partially dependent on August leaf K level.

August midshoot leaf K of prune trees was increased within one growing season by all treatments except trench plus lime. Trees receiving compost also had increased levels of leaf N, P, Ca, Mn, Fe, Cu and B. Yield and shoot growth were increased only by compost mulch applications. Fruit size was partially dependent on August leaf K levels.     

Genetic diversity of introduced and local Spanish persimmon cultivars revealed by RAPD markers

Persimmon culture has become an alternative for fruit growers in Italy, Israel and Spain. However, there is some confusion concerning cultivar identification in non-Asian countries were the species was introduced. Authenticating the identity of germplasm resources of persimmon would be a great value for breeding. Due to the floral biology of the persimmon species the expected genetic variability is high. RAPD markers were chosen for this study of persimmon germplasm resources in Spain. Nineteen markers were obtained from 8 primers. The average of 2.4 markers/primer was higher than that obtained in other woody fruit species. The availability of data referenced from isozymes and pomological traits revealed complete agreement among groups identified by RAPDs, isozymes and pomological traits. Results suggest that RAPD technology is adequate for fingerprinting persimmon and the data is consistent with persimmon's hypothetical origins, adaptation history and previous classification by isozymes or pomological traits. Many synonyms have been identified, mostly in cultivars from local surveys, suggesting that a few new genotypes arose in Spain since the species was introduced to Europe. By means of RAPD markers, a better identification of the European persimmon germplasm is available.     

Effect of leonardite application on leaf nutrient content and fruit chemical parameters of cherry (Prunus avium L.)

Abstract

Organic fertilizers have an important role in plant nutrition practices by protecting the environment, human health, ecological balance and supporting sustainable productivity. Hence, the use of leonardite which has high humic acid content is becoming increasingly common. Objectives of the study were to examine the effects of leonardite application on leaf nutrient contents and some fruit chemical parameters (pH, total soluble solids, total phenolic content and antioxidant activity) of cherry (Prunus avium L.). Cherry Ziraat 900 was used as a test plant and grafted on a Gisela 6 rootstock. The research was carried out in a randomized block design with three replications and 12 parcels. The 10-year-old orchard was chosen as the research area with having planting space of 5.0?m × 2.5?m. Each parcel consists of 25 trees. Four different doses (0-2-4-8?kg tree^?1) were applied to drip lines of trees at a depth of 20?cm. Chemical fertilizers (N-P-K) were also added. The effect of the applications in the research has a statistically significant effect on all parameters analyzed in leaves and fruits except for Mg in leaves. In addition, as the dose of leonardite is increased, its effect was also increased and the results appeared in different groups due to the increase of ionization, mobility and adsorption of chemical fertilizers applied in the research. Nutrient absorption was increased because of the increased permeability of stem cell membrane by leonardite applications. Consequently, nutrient levels in the leaves were sufficient and/or excessive and fruit contents were found optimum.     

Population genetic diversity and genetic affinity analyses of sweet orange cultivars (Citrus sinensis (L.) Osbeck) by using IRAP molecular markers

Genetic Resources and Crop Evolution - Citrus plants are one of the most important fruit plants which are consumed all over the world. The breeding of these valuable fruit plants is based on...     

Controlled Atmosphere Storage of Sweet Cherries (Prunus avium L.)

Sweet cherry (Prunus avium L.) cultivars 'Emperor Francis', 'Huldra', 'Sam', 'Stella', 'Kristin', and 'Van' were stored in controlled atmosphere (CA) during one, two or three seasons. The cherries were held at a temperature of 0°C, or 2°C for up to three weeks. The fruit quality was evaluated on juice optical density (OD), titratable acidity (TA), pH, soluble solids content (SSC), ethanol, firmness and flavour. In general, CA had little effect on SSC in the three seasons and did not show any effects in reducing pitting. Controlled atmosphere has shown some beneficial effects on flavour, reducing decay, reducing toughening, and maintaining TA in sweet cherries. Generally, flavour score was higher for fruit kept in CA than for fruit stored in air, and the higher the CO₂ the better the taste. 'Van' and 'Sam' showed excellent taste scores after three weeks both from CA and air storage. There was very little ethanol accumulation in the fruits under CA, and it was well below the detrimental level. It is recommended that O₂ levels for sweet cherry storage can be further reduced below 10% and/or CO₂ can be increased above 15%.     

Structure of genetic diversity among common bean (<Emphasis Type="Italic">Phaseolus vulgaris</Emphasis> L.) varieties of mesoamerican and andean origins using new developed microsatellite markers

A common bean genomic library was constructed using the ‘IAC-UNA’ variety enriched for (CT) and (GT) for microsatellite motifs. From 1,209 sequenced clones, 714 showed microsatellites distributed over 471 simple and 243 compound motifs. GA/CT and GT/CA were the most frequent motifs found among these sequences. A total of 123 microsatellites has been characterized. Out of these, 87 were polymorphic (73.7%), 33 monomorphic (26.8%), and 3 (2.4%) did not amplify at all. In a sample of 20 common bean materials selected from the Agronomic Institute Germplasm Bank, the number of alleles per locus varied 2–9, with an average of 2.82. The polymorphic information content (PIC) of each marker varied from 0.05 to 0.83, with a 0.45 average value. Cluster and principal coordinate analysis of the microsatellite data were consistent with the original assignment of the germplasm accessions into the Andean and Mesoamerican gene pools of common bean. Low polymorphism levels detected could be associated with the domestication process. These microsatellites could be a valuable resource for the bean community because of their use as new markers for genetic studies. Electronic supplementary material The online version of this article (doi: ) contains supplementary material, which is available to authorized users. An erratum to this article can be found at     

Genetic diversity in cucumber (Cucumis sativus L.): II. An evaluation of selected cultivars released between 1846 and 1978

Genetic variation among 155 U.S. modern and heirloom cultivars was assessed from assays of 21 polymorphic isozyme loci. Four loci (Fdp-1, Mdh-1, Mpi-1 and Pgd-1) were monomorphic. Multivariate analyses partitioned cultivars into two distinct groups: those released before 1968, and those released after 1968. Cluster analysis produced a dendrogram with 14 nodes and 28 groups. Modern U.S. and European cultivars released after 1968 differed in isozyme frequencies. Isozymic profiles clearly discriminated some cultivars with unique attributes and/or pedigrees [e.g., Windermoor Wonder (USA), Gergana (The Netherlands), Seiram (The Netherlands), Fancy Pak (USA), Dasher 2 (USA), and WI 2757 (USA)].     

Genetic diversity in melon (Cucumis melo L.): Anevaluation of African germplasm

The genetic diversity among 126 exotic (108) andreference array (RA) melon (Cucumismelo L.) accessions (18) was assessed byvariation at 49 random amplified polymorphic DNA marker bands(putative loci) using 29 10-mer primers. Africanaccessions of unknown melon market classes were compared to the RAaccessions from a broad range of C.melo subsp. melo groups(Cantalupensis, Conomon, Inodorus and Flexuosus). Althoughdifferences in groupings occurred after multidimensional scaling andcluster analysis, both analyses placed African accessions into twogroups, which were separate from RA groupings. One African group of33 accessions containing accessions from Zimbabwe (5),Zambia (24), Mali (1), one of two Senegalaccessions and two of three South African accessions examined. Thesecond group, which consisted of 67 accessions containing collectionsfrom Egypt (40), Tunisia (6), Libya(13), Morocco (1), Algeria (2),Ethiopia (1), Niger (1), Sierra Leone(1), S. Africa (1), Zambia (1) andZimbabwe (1). Depending on the multivariate analysistechnique employed, accessions from Kenya, Senegal and Ghana formedeither unique groupings or were grouped with accessions(Cantalupensis) from the RA. Both analyses indicate thatthe genetic differences inherent between the African gene pools isassociated with the geographic proximity of African countries(northern vs. central-southern Africa) in thegermplasm array examined. Moreover, these data indicate that thegenetic diversity of U.S. and European commercial RA germplasm(Cantalupensis and Inodorus) could be enhanced by theintroduction of genetic variation from African accessions, and thatit would be advantageous to acquire more accessions from thisgeographically and ecologically varied region to ensure the retentionof existing genetic diversity.     

Genetic diversity in African cucumber (Cucumis sativus L.) provides potential for germplasm enhancement

Genetic diversity among 26 cucumber (Cucumis sativus L. var. sativus) accessions from five African countries [Algeria (1), Egypt (21), Ethiopia (2), Kenya (1), and Libya (1)] present in the U.S. National Plant Germplasm System (NPGS) were examined by assessing variation at 71 polymorphic random amplified polymorphic DNA (RAPD) loci. Genetic distances (GD; simple matching coefficient) were estimated among these African accessions and a reference array (RA) of 21 accessions representative of the genetic variation in cucumber. GD among African accessions ranged between 0.41 and 0.97. GD among accessions in the reference array ranged between 0.36 and 0.88. Multivariate analysis identified three distinct groupings (1–3) of African accessions; Group 1 contained 21 accessions (Egypt, Ethiopia and Libya), Group 2 consisted of two accessions (Kenya, Algeria), and Group 3 possessed three accessions (Egypt). These groupings were distinct from each other (P > 0.001). Accessions in Group 1 differed genetically from all other accessions examined (P > 0.01), and accessions in Groups 2 and 3 were uniquely associated with several RA accessions. While GD among accessions in Group 1 ranged between 0.52 and 0.90, distances among Group 2 accessions varied between 0.93 and 0.97. The GD between the two accessions in Group 3 was 0.65. An accession from Syria (PI 181874) and from one Turkey (PI 199383) were genetically more similar to accessions in Group 1 than to other accessions in the RA. Likewise, accessions in Group 2 were genetically similar to two RA accessions from China and a European glasshouse cucumber line, and Group 3 accessions showed genetic affinities with the U.S. market class cultivar Dasher II. Data suggest that some Egyptian accessions (Group 1) possess unique genetic variation, that this germplasm has potential for broadening the genetic base of commerical cucumber, and that further collection of African germplasm is likely to enhance genetic diversity of cucumber in NPGS.     

Developing first microsatellites and analysing genetic diversity in six chia (Salvia hispanica L.) cultivars

Genetic Resources and Crop Evolution - Chia (Salvia hispanica L.), originated in central and southern Mexico and Guatemala, is an emerging industry crop due to its high content of omega‐3...     

The effects of pressure trunk injections of potassium on the mineral content,growth, yield and fruit quality of sweet cherry (Prunus avlum L.) and mineral content of prune (Prunus domestica L.)

Abstract

Fall trunk injections of 200 g K in K₂SO₄ solution or up to 300 g K in K₂HPO₄ solution had no effect on sweet cherry mid‐shoot leaf K in August. Phosphorus content was significantly increased in buds in March and midshoot leaves in August one year by fall injection of K₂HPO₄ (79.2 g P).

Spring trunk injections of 12.5 g K (K₂S04 or K₂HPO₄) in prune increased leaf K within four days and K levels remained higher than controls for at least 22 days with K₂SO₄ Leaf P was increased within four days by K₂HPO₄ and was higher than controls in August.

Fruit set in sweet cherry was significantly lower on trees injected with 200 g K (K₂S0₄) and 300 g K (K₂HPO₄). Yield was significantly lower for all injection treatments and was probably caused at least in part by reduced fruit set. Fruit quality was not affected by K injections.