A comparison between single seed descent and early cross selection in wheat breeding

Summary Two selection procedures in wheat breeding were compared on the basis of their ability to supply high yielding inbred lines. The first procedure consists of an early selection between crosses in the F₃ generation, based on predictions of the cross mean and the between line variance. In the second procedure selection is postponed until the F₆, which is derived by single seed descent. The two procedures are evaluated in a two year test, using pseudo-lines of spring wheat. These pseudo-lines consist of mixtures of varieties and enable an estimation of the exact genetic parameters. In this way the accuracy of the predictions can be examined.In case of early selection, it appears that the predictions of the cross mean and especially the between line variance are very inaccurate. This is caused by the effects of plot size, intergenotypic competition and, to a lesser extent, dominance and/or epistasis. It results in an erroneous ranking of the crosses and the discarding of the potentially best cross. The F₆-SSD line estimates are much more accurate and thus the better lines are indeed selected. A first comparison between the two selection procedures therefore indicates a preference to the SSD method.     

A comparison between single seed descent and early cross selection in wheat breeding

Summary Two selection procedures in wheat breeding were compared on the basis of their ability to supply high yielding inbred lines. The first procedure consists of an early selection between crosses in the F₃ generation, based on cross performance. In the second procedure selection is postponed until the F₆, which is derived by single seed descent. The two procedures are evaluated in a two year test, using pseudo-lines of spring wheat. These pseudo-lines consist of mixtures of varieties and enable an estimation of the true genetic parameters. In this way the accuracy of the predictions can be examined.The first year of this comparison comprised the actual selection process and in the second year an F₆ and F₇ generation were mimicked, based on the selected lines of the F₃ and F₆ respectively, and evaluated in a large yield test. This paper gives the final results after the second year. From the first year it was found that the F₃ cross predictions were very inaccurate, whereas selection in the SSD-F₆ appeared to perform well. This resulted in a higher yielding set of lines evolving from the SSD-F₆. Despite a pronounced genotype-year interaction this difference in yield level was also found between the F₇ and the F₆ lines, derived from the selected crosses in the F₃. We conclude that the early selection procedure is not advantageous compared to the fast SSD procedure.     

Cross prediction in bread wheat germplasm using single seed descent lines

Populations of F₆ recombinant inbred lines, generated by single seed descent from a half diallel among eight bread wheat lines adapted to the East African highlands, were used to identify those crosses that were more likely to produce cultivars which combined resistance to yellow rust with improved yield. Crosses having the most resistant line as one parent offered the best prospect of success, particularly those which produced F₁hybrids exhibiting better parent heterosis. For plot grain yield there was a highly significant correlation between the observed and predicted rankings of the recombinant inbred line populations for the proportion of individual lines equalling or surpassing the target value. For yellow rust severity, however, this correlation was non-significant when a target value of zero was used. Adopting a slightly less stringent target of 0.25, coupled with the omission of two aberrant populations, increased this correlation significantly. The plant breeding implications of these results are discussed. This revised version was published online in August 2006 with corrections to the Cover Date.     

Use of immature seed germination and single seed descent for rapid genetic gains in pigeonpea

Long duration required for generation advancement in pigeonpea [Cajanus cajan (L.) Millsp] is one of the major bottlenecks in realizing rapid genetic gains. Therefore, a technology for rapid generation turnover is warranted to facilitate the development of new cultivars and recombinant inbred lines. Breeding of early‐maturing cultivars has now opened up the possibility of rapid generation advance (RGA) in this crop. This paper reports the development of an RGA technology that integrates the germination of immature seeds with single seed descent method of breeding. The results showed that immature 35‐day‐old seeds can be used successfully to turn over a generation of pigeonpea with 100% seed germination. These way 3/4 successive generations can be grown within a year. The methodology presented in this study will accelerate the breeding process for breeding cultivars and develop rapidly the materials required for genomics research in pigeonpea.     

The effect of low frequency random crossing on heterozygosity and frequency of recombinant homozygotes in lines developed by single seed descent

Summary This study examines the effects of random cross-fertilization on genotypic frequencies during the development of lines by the method of single seed descent, using a combination of generation matrix methods and equilibrium prediction equations for two linked loci. Results show that heterozygosity declines rapidly in early generations, as in the case of complete selfing, and declines to an equilibrium limit that is relatively insensitive to the degree of linkage and almost entirely determined by the frequency of crossing. The overall frequency of recombinant homozygotes is reduced by crossing but the frequency increases in successive generations to an equilibrium limit which is independent of the level of linkage and depends entirely on the frequency of crossing. The approach to the limiting frequency of recombinant homozygotes is extremely slow, in terms of generations, for closely linked loci and low frequency of crossing. The study then concentrates on the frequency structure of the F₈ generation to cover the time-span typically involved in practical breeding programmes.     

Comparison of pedigree selection and single seed descent for oil yield in linseed (Linum usitatissimum L.)

Summary Four populations of linseed derived from five parents were advanced from the F₂ to the F₆ generation by SSD and to the F₅ by pedigree selection. These populations were used to compare the efficiency of the two methods in order to provide superior genotypes with respect to grain yield and oil content, i.e. oil yield. The results showed minimum differences between pedigree and SSD lines for grain yield, where in only one cross the SSD lines were significantly superior to the pedigree lines. Since pedigree selection was carried out for both, seed yield and oil content, a positive response to selection was expected. However, early selection for yield, a character with low heritability, was not successful. On the contrary, significant differences for oil content were detected between the two groups of lines in three of the four crosses studied. In these cases the pedigree lines were superior to the SSD lines. These results demonstrate that strict selection in early generations for oil content, a character with comparatively high heritability, is feasible and successful in linseed. However, selection for seed yield should be postponed to later inbred generations. Consequently, in breeding for maximum oil yield of linseed a two-step selection procedure is recommended.Abbreviations PS pedigree selection - SSD single seed descent - TGW thousand grain weight     

Agronomic performance of anther‐derived doubled haploid and single seed descent lines in crosses between primary and secondary winter triticale

Octoploid (8x) and hexaploid (6x) primary triticales (xTriticosecale Wittm.) can be used as crossing parents with secondary 6x triticales to enlarge the genetic basis of a breeding programme or introgress traits. Doubled haploid (DH) production permits to develop homozygous lines more rapidly from a segregating generation than other breeding methods such as single seed descent (SSD). Both anther‐derived DH and SSD lines were produced from reciprocal cross‐combinations between 8x and 6x primary and 6x secondary triticales. Field experiments of DH and SSD lines were conducted in three environments as two‐replicate lattices to measure seven agronomic traits. A tendency for higher grain yield, taller plants and a higher 1000‐kernel weight of SSD lines compared with DH lines was found. Significant genetic variation for all traits in both breeding methods was revealed, indicating their suitability to select superior genotypes. Hexaploid and even more so 8x primary triticales can profitably be included as crossing parents in a commercial breeding programme. In such crosses, the primary triticales should be used as the male parents if followed by DH method.     

Comparisons between doubled haploid lines produced by anther culture,the Hordeum bulbosum-method and lines produced by single seed descent in barley crosses

Summary Possible negative effects of tissue culture on qualitative and quantitative characters have been investigated in three crosses of spring barley, using doubled haploid lines produced by anther culture (AC, with maltose as a carbon source) or the Hordeum bulbosum-method (HB). In one cross inbred lines produced by single seed descent (SSD) have also been included. Quantitative characters were investigated in a 2-year field experiment at one location. The results show that although the methods in the majority of cases gave similar results, the genotypic arrays produced were not identical. Different markers deviated in the various cross/method combinations. The ranking of methods as well as the frequencies of lines transgressive for grain yield differed between crosses. Thus no consistently negative impact of anther culture in barley has been found, and, although not identical, the various methods may be considered equivalent.Abbreviations AC Anther Culture method - SSD Single Seed Descent method - HB Hordeum bulbosum method     

The effectiveness of early generation (F3) yield testing and the single seed descent procedures in two cowpea (Vigna unguiculata (L.) Walp.) crosses

Summary Two breeding procedures were compared in two cowpea crosses. Both procedures were started from the same selected F₂ plants in each cross. For the early generation yield testing, the F₃ lines were yield tested and a pedigree and bulk methods followed in F₄ and F₅. Each F₅ line was bulked to provide seed for a yield test in F₆. In the Single Seed Descent (SSD) procedure, a single seed was taken from each F₂ plant to produce the F₃ generation. The procedure was repeated for the F₄ and F₅. The F₆ SSD lines and the F₆ yield testing lines were compared in yield tests.The results showed that differences in yielding ability of F₃ lines persisted over generations indicating that selection was effective. This was confirmed by the high significant correlations between F₃ yields and those of later generations which ranged from r=0.51^* to 0.85^**.The grain yields of lines derived by the single seed descent procedure were as good as those derived from early generation yield testing.Significant linear correlation between visual rating of F₃ and F₆ yields with actual yields revealed that it is possible to identify promising lines of cowpea visually.     

Predicting transgressive segregants in early generation using single seed descent method-derived <Emphasis Type="Italic">micro-macrosperma</Emphasis> genepool of lentil (<Emphasis Type="Italic">Lens culinaris</Emphasis> Medikus)

In a self-fertilised crop like lentil, the identification of transgressive segregants for economically important trait such as seed yield is an important aspect of any practical breeding programme. The prediction of expected transgressive segregants in F₁ generation obtained as a ratio of additive genic effect [d] and additive variance (D) i.e. [d]/√D was studied in 28 crosses of lentil generated in a diallel fashion involving four parents each of macrosperma (exotic) and microsperma (Indian) types, respectively, resulting in three hybridization groups. The seed material advanced to F₂, F₃ and F₄ generations through single seed descent method was evaluated to determine the observed transgressive segregants for seed yield/plant. The observed frequency of crosses showing more than 20% transgressive segregants in F₂ to F₄ generations were exhibited in 9(32%) crosses, of which 7(77%) crosses were of macrosperma × microsperma type. Genotypes Precoz and HPL-5 of the exotic group (macrosperma) produced maximum number of transgressive segregants with the genotypes L-259, L-4145 and PL-406 of the Indian origin (microsperma). Goodness of fit (non-significant χ² value) in F₂ generation was observed for 19(68%) crosses of the total genepool, out of which 9(56%) crosses each in F₃ and F₄ generation belonged to the macrosperma × microsperma group, depicting it as the gene pool of paramount importance to obtain maximum transgressive segregants, therefore establishing the efficacy of the method used.     

The relationship between powdery mildew (Sphaerotheca fuliginea) resistance and leaf chlorosis sensitivity in cucumber (Cucumis sativus) studied in single seed descent lines

Summary The genetic relation between powdery mildew resistance and sensitivity for leaf chlorosis of glasshouse cucumber was investigated. The powdery mildew resistant, leaf chlorosis sensitive hybrid variety Profito was crossed with the powdery mildew susceptible, non chlorosis sensitive hybrid variety Corona. Forty four F₆ inbred lines of this cross, produced by single seed descent, were tested for powdery mildew resistance (PMR) and leaf chlorosis sensitivity (LCS). PMR and LCS were positively correlated (r=0.59). One or more of the PMR genes probably causes LCS as a pleiotropic effect or is closely linked to LCS, but also other factors, not genetically linked to PMR can cause LCS. Five F₆ lines combined a significantly higher level of PMR than Corona with a significantly lower LCS than Profito. Three of these lines could hardly be distinguished from Corona for the level of LCS.Abbreviations LCS leaf chlorosis sensitivity - PMR powdery mildew resistance - SSD Single Seed Descent     

Comparison of selection procedures in breeding for seed yield in segregating sesame populations

Summary Four hundred sesame (Sesamum indicum L.) lines selected by five methods from five crosses were tested for yield and other agronomic characters in F₆ and F₇. More high yielding lines were isolated by the bulk method and in the cross involving two local cultivars when two seasons means and performance in each individual season were considered. The cross involving two exotic cultivars did not produce a single line superior to local recommended variety. The 80 highest yielding lines recorded a 10.8% increase in yield compared to the mean of 400 lines. Thirty five lines were among the top 20% both seasons with a 13.2% increase in yield. Highly significant seasonal and population effects were recorded. There were no significant differences among the methods of selection although the yield differences among lines were highly significant. Interactions of seasons × populations, seasons × methods, populations × methods and seasons × populations × methods were highly significant. The results indicate that simple and less expensive bulk method may be used with equal success as the pedigree, single seed descent or early generation testing methods when selecting for yield in segregating sesame populations. The importance of inclusion of a high yielding, locally adapted cultivar in the crossing programmes for yield breeding of sesame has also been revealed.Abbreviations BM Bulk method - EGT Early generation testing - G × E Genotype × environment - MSS Modified single seed descent - PM Pedigree method - SSD Single seed descent     

Yield trade-off and the role of parental selection based on seed size when breeding for soybean seed protein

Alternative physiological strategies can increase protein concentration in soybean: (i) more-than-proportional increases in seed protein content (mg seed⁻¹) relative to increases in carbohydrate and oil content in large-seeded genotypes or (ii) more-than-proportional reductions in carbohydrate and/or oil content relative to protein content reductions in small-seeded genotypes. Because these strategies differentially affect crop growth and development, we hypothesized that populations developed from high-protein (HP) parents with contrasting seed sizes will present differences in how seed yield and protein concentration correlate. To test this, three breeding strategies were developed by mating high-yielding cultivars and HP ones that differ in seed sizes, reflecting the alternative strategies mentioned above. Neither tested crossing strategies showed differences in their correlation values between seed yield and protein concentration, as initially expected. Nevertheless, populations developed from crossing a HP-small-seeded parent to a HP-large-seeded one showed the highest number of transgressive segregants for protein yield. Our results showed that parent selection based on seed size has no beneficial effects on the development of high-yielding, HP soybean populations, but it might affect the number of transgressive segregants for protein yield.     

Detection of chromosomes carrying genes for seed dormancy of wheat using the backcross reciprocal monosomic method

Preharvest sprouting (PHS) in wheat represents a major constraint to the production of high‐quality grain. Genetic variation for tolerance to PHS is associated with seed dormancy. The present study was initiated to detect homologous chromosome variation associated with seed dormancy genes in a PHS tolerant cultivar ‘Zenkojikomugi’ (Zen) and ‘Chinese Spring’ (CS) using the backcross reciprocal monosomic method. The most striking effect on variation in seed dormancy was associated with chromosome 3A, and followed by group 4 chromosomes. These chromosomes of Zen increased dormancy compared with the respective CS homologues. Chromosomes 2D and 7D of Zen, and 6A of CS seemed to contribute smaller positive effects on dormancy. Chromosomes 2A of CS and Zen, as well as 3B, were equally effective in enhancing dormancy. The chromosome 3 A factors were independent of the grain‐colour gene R‐A1 because Zen was found to carry the white‐grained R‐A1a allele, which was identical to that of CS, and there was no difference in dormancy between the reciprocal F₁ seeds.     

Research on the inheritance of seed dormancy in lettuce (Lactuca sativa L.) and selection for non-dormancy

Summary Inheritance of dormancy and the results of selection of non-dormant genotypes in segregating populations of lettuce were investigated. Diallel crosses were therefore carried out between two dormant (DOR) and two non-dormant (NDOR) cultivars. F₁, F₂ and F₃ populations were analysed.Environmental variation for dormancy usually was large. The mean germination time (GT) of F₁ seeds from the NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses was often intermediate to the GT of the NDOR and DOR parent. The mean GT of F₁ seeds from DOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses equalled the mean GT of the parents; the same applies for the NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]NDOR crosses. No differences between reciprocals were observed and neither were such differences found for F₂ populations. F₂ populations from DOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses showed no significant segregation of rapidly germinating seeds and in F₂ populations from NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses no accumulation of genes for long GT occurred. In F₂ populations from NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses usually 40–60% of the seeds germinated as rapidly as the seeds of the NDOR parents. Only one gene (D) could be responsible for the difference in dormancy behaviour of the DOR and NDOR cultivars. The behaviour of the F₃ lines from various NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses supports this hypothesis. A regression of F₃ means on the value of F₂ seeds for GT of various NDOR % MathType!MTEF!2!1!+-% feaafiart1ev1aaatCvAUfeBSjuyZL2yd9gzLbvyNv2CaerbuLwBLn% hiov2DGi1BTfMBaeXatLxBI9gBaerbd9wDYLwzYbItLDharqqtubsr% 4rNCHbGeaGak0dh9WrFfpC0xh9vqqj-hEeeu0xXdbba9frFj0-OqFf% ea0dXdd9vqaq-JfrVkFHe9pgea0dXdar-Jb9hs0dXdbPYxe9vr0-vr% 0-vqpWqaaeaabaGaciaacaqabeaadaqaaqaaaKaaafaafaqabeGaba% aajqgaa+FaaiaadIhaaeaacaWG4baaaaaa!3B90!\[\begin{array}{*{20}c}x \\x \\\end{array}\]DOR crosses showed that h²-narrow usually was rather high for most crosses implying that selection for non-dormancy can be carried out in F₂ populations.     

Effect of plant density on selection for seed yield in two population types of Phaseolus vulgaris L.

Summary Pedigree selection for seed yield, using early generation yield tests, was practiced from the F₂ to F₇ in two populations of common bean (Phaseolus vulgaris L.) in three plant densities: 66, 133, and 266 thousand plants ha^-1 at CIAT-Palmira, Colombia. The six highest yielding lines selected from each plant-density, along with 13 parents, were evaluated in a 7×7 lattice design with three replications at the three densities utilized for selection, and at 399,000 plants ha^-1 in 1988 and 1989.Based on the mean performance of selected lines and the mean of the parents, selection for seed yield was effective in all densities in both populations. However, none of the lines selected from the population within the race Mesoamerica (TC 4673) significantly outyielded their best parent under any plant density. The highest yielding lines selected from the interracial population (TR 4635) outyielded their best parent irrespective of the plant-density used for selection. The highest yielding line originated from the highest density used for selection. Low density was neither good for selection nor for evaluation and identification of high-yielding cultivars of common bean. There was no significant difference between the mean yield of lines selected at the intermediate and high population densities. The effects of plant density, year, and their interactions were significant for seed yield.     

A comparison of traditional and haploid-derived breeding populations of oilseed rape (Brassica napus L.) for fatty acid composition of the seed oil

Summary Microspore embryogenesis technology allows plant breeders to efficiently generate homozygous micros-pore-derived breeding populations of oilseed rape (Brassica napus L.) without traditional generations of inbreeding. This study was conducted to compare the frequency distribution of microspore-derived population and single seed descent populations with respect to fatty acids of seed oil. Both microspore-derived populations and single seed descent populations were produced from each of three crosses made between selected parents containing contrasting amount of erucic, oleic, linoleic and linolenic acids. The fatty acid content of F₃ plants derived lines (F₅ seed) developed by single seed descent was compared to that of microspore-derived populations. The means, ranges and distribution pattern of seed fatty acid contents were similar in both populations for each fatty acid studied, although a few heterozygous lines were observed in the single seed descent populations. The results indicated that microspore-derived population form random, homozygous F₁ plant derived gametic arrays for all fatty acids evaluated. Selection for altered fatty acid composition in microspore-derived and single seed descent homozygous populations should be equally efficient, in the absence of linkage of traits investigated.