Selection for seed yield in Andean intra-gene pool and Andean × Middle American inter-gene pool populations of common bean

Yields of large-seeded Andean (A) common bean (Phaseolus vulgaris L.) cultivars of Chile and Nueva Granada races are 40 to 60% lower compared to their Middle American (M) counterparts of small-seeded Mesoamerica and medium-seeded Durango races. Our objective was to use the concept of congruity backcrossing between Andean x Middle American inter-gene pool [AM 11833 = A 483 (A)///// A 686 (M) //// PVA 800A(A)/// ‘Carioca’ (M)// Carioca (M)/ G 19833 (A)] and between races within Andean gene pool [i.e., intra-gene pool Andean, AA 11834 = A483 (A)//// ‘Cardinal’(A) /// ‘Blanco Español’(A) // BlancoEspañol (A) / ‘Taylor’ (A)] to compare selection for seed yield improvement of large-seeded Andean beans. Seven hundred sixty seven F₂-derived F₃ (F_2:3) families were produced for each population. Visual appraisal for total plant performance, combined with seed yield from non-replicated plots was used for selection of 551 families in F_2:3, 182 families in F_2:4, and 91 families in F_2:5 in each population. Eight hundred twenty three F_5:6 lines were developed from the 91 F_2:5 families in each population. Visual selection, combined with seed yield in non-replicated plots was again used to select 294 lines in F_5:6 in each population. Similarly, 44 highest yielding F_5:7 lines were selected in AM 11833 and 39 F_5:7 lines in AA 11834. Thus, single plant selections were made in the F₂ and F₅, and plants within each plot were harvested in bulk in F₃, F₄, F₆, and F₇. Thirty nine F_5:8 lines from AA 11834 and 44 lines from AM 11833, parents, and checks were evaluated at Popayán and Quilichao, Colombia in 1998 and 1999. Selected lines in both populations, on average, out-yielded the mean of their large-seeded Andean parents. Mean yield of the lines selected from AM 11833 was 50% higher than AA 11834 lines. Twelve F_5:8 lines out-yielded the highest yielding Andean parents G 19833 and A 483 in AM 11833, whereas only one line yielded significantly higher (p < 0.05) than the highest yielding parent A 483 in AA 11834. However, none of selected lines out-yielded small-seeded Middle American parents used in AM 11833 (A 686 and ‘Carioca’). The mean 100 seed-weight of AA 11834 was 36 g compared to 28 G for AM 11833 F_5:8 lines. Selected lines had similar days to maturity as parents in AM 11833, and matured 3 d later in AA11834. Correlation coefficients between yield and 100 seed-weight were negative in both populations. Yield and days to maturity were positively correlated in AA 11834.     

Selection potential for seed yield from intra- and inter-racial populations in common bean

Common bean populations from crosses between lines of different races are thought to be more promising for selection of high yield potential than those from intra-racial crosses. Three distinct diallel crosses were made to test this hypothesis and to determine the possibility of substituting diallel crosses for multivariate techniques that estimate genetic divergence. The crosses were between races Mesoamerica × Mesoamerica, Mesoamerica × Durango and Jalisco, and Mesoamerica × Nueva Granada. The parents and the resulting F₄ populations were evaluated at Lavras-MG, Lambari-MG and Patos de Minas-MG, Brazil. The diallel analysis of seed yield was done and the genetic divergence estimated by Mahalanobis distance. Estimates of general and specific combining ability indicated that some inter-racial populations were more promising for selection to increase seed yield than intra-racial populations. However, due to their undesirable seed color and size, and growth habit, especially in a short term breeding program, the chances of obtaining high yielding lines with an acceptable bean is reduced. Genetic divergence was not a good measure to choose the parents because usually, the most divergent groups included were not adapted lines. This revised version was published online in July 2006 with corrections to the Cover Date.     

Selection for Increased Seed Nitrogen Accumulation in Common Bean: Implications for Improving Dinitrogen Fixation and Seed Yield

Estimates of N₂ fixation in segregating populations of bean plants based on ¹⁵N-isotope methods are technically demanding and expensive; therefore, indirect measures based on related traits including total seed N were used to select for improved N₂ fixation and yield. In 1985, six populations of F₂-derived F₃ families resulting from six parental lines crossed to a common tester were grown in field trials on a low-N soil. In 1986, 25 selected half-sib families and two populations of full-sib F₄ families were grown under similar conditions. Parents and a non-nodulating soybean line were included both years. Narrow sense (H_NS) heritability estimates based on parent-offspring regressions ranged from 0.57 for total seed N to 0.39 for shoot biomass in one population, but were near zero for all measured traits in a second population. Among the criteria used to identify parental lines with superior potential for producing progenies with high total seed N, testcross population means combined with estimates of realized heritability were the most reliable. Selection of the best F₃ families for total seed N resulted in F₄ families with increased total seed N and higher seed yields, while seed protein percentage was unchanged. When plants are grown on low-N soils, selection for total seed N offers a useful alternative to selection for increased N₂ fixation based on ¹⁵N-isotopic or total-N-difference method.     

Diversity in seed quality traits of common bean populations from Basilicata (Southern Italy)

The diversity of nutritional and culinary traits in 21 populations of common bean from the Basilicata region was studied for three consecutive harvests (1995‐97). The results were compared with the six commercial cultivars widely grown in the region. Some populations deserve particular attention since they had large seeds, high protein content, low trypsin inhibitor levels and short cooking time. The cluster analysis showed that 18 populations clustered in two main groups and that the bush populations were clearly distinguishable from the climbing ones. When phaseolin type and some plant morphological traits were added to the nutritional and culinary traits to classify these populations, it was observed that they resembled the race Peru (Andean gene pool).     

Selection for yield in early generations of self-fertilizing crops

Summary If a breeder is to apply selection to a cross-population of a self-fertilizing crop and wishes to maximize his chances of finding a productive genotype, he will have to introduce yield tests in the F₃ lines. Should he not do so because of his intention to work on many populations simultaneously, his tests would be considerably less accurate and the finding of a favourable combination more or less a matter of mere chance.Bulk breeding will result in genetic drift or numbers of plants too large to manage, or in a combination of both.Application of the Single Seed Descent for quantitative characteristics causes such a genetic drift, that the method is not to be recommended.Multiple crosses (double-crosses) to improve quantitative characteristics require populations of a size, that cannot be realized and/or selected. This type of crosses is more suited for cases in which qualitative characteristics form the breeding goals and when it is impossible to obtain the favourable combination using only two varieties.Genic recessive male sterility may be a means to raise large progenies. In the F₃ it confuses the issue of yield of fruits or seeds, which is highly vulnerable in any case. In the F₂ its significance for finding the proper recombinant is very low.     

Effect of plant density on selection for seed yield in two population types of Phaseolus vulgaris L.

Summary Pedigree selection for seed yield, using early generation yield tests, was practiced from the F₂ to F₇ in two populations of common bean (Phaseolus vulgaris L.) in three plant densities: 66, 133, and 266 thousand plants ha^-1 at CIAT-Palmira, Colombia. The six highest yielding lines selected from each plant-density, along with 13 parents, were evaluated in a 7×7 lattice design with three replications at the three densities utilized for selection, and at 399,000 plants ha^-1 in 1988 and 1989.Based on the mean performance of selected lines and the mean of the parents, selection for seed yield was effective in all densities in both populations. However, none of the lines selected from the population within the race Mesoamerica (TC 4673) significantly outyielded their best parent under any plant density. The highest yielding lines selected from the interracial population (TR 4635) outyielded their best parent irrespective of the plant-density used for selection. The highest yielding line originated from the highest density used for selection. Low density was neither good for selection nor for evaluation and identification of high-yielding cultivars of common bean. There was no significant difference between the mean yield of lines selected at the intermediate and high population densities. The effects of plant density, year, and their interactions were significant for seed yield.     

Indirect selection for persistence and seed yield in large-leaved white clover

High persistence and seed yield are important targets in white clover breeding but their assessment is expensive. The efficiency of indirect selection for these traits performed on characters recorded during a medium-term dry matter (DM) yield evaluation was verified for large leaved populations in separate experiments for medium-term (three-year) and long-term (fourth and fifth year) DM yield (Trial 1) and seed yield (Trial 2). The best results were provided by stolon density observed at the end of the third cropping year for prediction of long-term yield, and by the product of number of heads times number of florets per head assessed prior to mowing in Trial 1 for prediction of seed yield in Trial 2. Indirect selection was about as efficient as direct selection in these cases. Predictions of persistence from three-year or third year DM yield, and seed yield from single seed yield components in Trial 1 were less accurate.     

Selection for seed set capacity uncorrelated with flower heteromorphism in Primula vulgaris Hudson

Within-line pollinations were used when measuring the seed set of plants from seven early generation inbred lines of Primula vulgaris. One high seed setting plant and one low seed setting one were selected from each line and the seed set was evaluated on the offspring from selfings and within-line pollinations of these plants. Regression of offspring on parents for seed set was studied. The slope was estimated to be 0.17 ± 0.08, equivalent to an estimated heritability of around 34%. No significant differences in the slope of regression between the two reproduction methods (selfings or within-line pollinations) were detected. The realized improvement through one cycle of selection of high seed setting single plants in this early generation inbred material of P. vulgaris was 23.7%. Analysis of the seed set of within-line pollinated clones from late generation inbred lines of P. vulgaris revealed that only limited within-line variation remained after removal of the effects of the heteromorphic incompatibility system. It was concluded that selection of high seed setting single plants during early generations of inbreeding is efficient for improvement of seed set in future inbred lines of P. vulgaris to be used for hybrid seed production.     

Selection for sugar yield in sugar beet, Beta vulgaris, using different selection indices

In sugar beet breeding, sugar yield is mainly influenced by root yield and sugar content. In this short communication several indices to select for both traits simultaneously are compared in order to find the best one. The indices are correlated with the base index of Williams (1962) from independent experiments. The indices differ in the amount of information necessary for the calculation of their weights. Three different series of each eight sites gave similar results. The optimum index using all information from phenotypic and genotypic variances and covariances, did not perform best. Sugar content with its higher herit ability must have a larger weight than root yield. Heritabilities as index weights performed best, but two other indices using heritabilities and phenotypic but no genetic covariances also performed well.     

Independent, Alternate, and Simultaneous Selection for Resistance to Anthracnose and Angular Leaf Spot and Effects on Seed Yield in Common Bean (Phaseolus vulgaris L.)

Two double-cross populations were used to evaluate the efficiency of independent, alternate, and simultaneous selection practiced from the F₂ to F₈ for resistance to anthracnose and angular leaf spot of common bean (Phaseolus vulgaris L.). Seven resistant and high-yielding lines were selected from each of the four environments used during this study. These lines and the seven parents involved in two populations were evaluated in an 8 × 8 lattice design with three replications in two cropping seasons. Pathogen inoculum was used to create the three test environments: anthracnose alone, angular leaf spot alone, and anthracnose and angular leaf spot together. All entries were also evaluated in a fourth, disease-free environment. Selection for resistance to anthracnose and angular leaf spot was effective in both populations. Mean disease scores of all selected lines for anthracnose were lower than that of angular leaf spot irrespective of selection environment. Among the three stress environments, yields were higher in the anthracnose environment. However, lines selected alternately for anthracnose and angular leaf spot were usually higher yielding, and the highest yielding line in both populations originated from this selection environment. The mean yield of selected lines was higher and the highest yielding line originated from the population involving a parent (G 1805) belonging to the Mexican highland race ‘Jalisco’. Positive association existed between seed yield of protected and pathogen-inoculated environments. No association was found between resistance to anthracnose and angular leaf spot.     

Selection for yield in wheat breeding

Summary If selection based on F₃ yield tests is to be effective, the yield tests must be successful in discriminating among yield genotypes. The available literature indicates that simple tests with limited or no replication are not very effective, although more extensive, replicated tests may be.Data from an experiment comparing F₃ yield tests with a single seed descent procedure showed that F₃ selection based on a two-replicate test with single seed descent procedure did not justify the extra work involved.     

Location-Specific and Across-Location Selections for Seed Yield in Populations of Common Bean, Phaseolus vulgaris L.

Two populations of common bean, Phaseolus vulgaris L., were used to make three independent location-specific selections at Palmira, Quilichao, and Popayán, Colombia. Also, three across-location selections were made by alternating generations between Palmira and Popayan, between Quilichao and Popayán, and among Palmira, Quilichao, and Popayán. The seven highest yielding lines selected from each environment and population along with 14 parents and two checks were evaluated for seed yield, seed weight, maturity, and reaction to an-thracnose, angular leaf spot, and common bacterial blight. Mean squares due to evaluation and selection environments, selected lines, and their interactions were significant for all traits. Mean yields of selected lines were higher than the mean of parents in both populations. Among location-specific selections, lines yielded higher at their respective selection site. Moreover, selections made at Popayán were higher yielding than those made at Quilichao or Palmira when tested across locations and years. Use of Popayán, a relatively wetter and cooler site, either alone or in combination with other locations resulted in higher yield, higher seed weight, and higher resistance to anthracnose. On the average, location-specific selections were lower yielding than the across-location selections. Among across-location selections, those selected between Palmira and Popayán were the highest yielding in both populations. Selections at Palmira and across all three locations resulted in greater stability.     

Breeding for resistance to bean golden mosaic virus in an interracial population of Phaseolus vulgaris L.

Summary Eighty-three F₂-derived F₈ recombinant inbred lines (RILs) randomly selected from a population (TY 8419) of two common bean genotypes (Pinto UI 114 x ICA Pijao), the two parents, and a control cultivar (Topcrop) were screened for their reaction to bean golden mosaic virus (BGMV) under glasshouse conditions. A randomized complete block design with two replications was used. Data were recorded for disease incidence, foliar yellowing, number of pods and seeds, and yield.Significant (P<0.05) differences among the 83 RILs were recorded for all traits. Of these RILs, 11 lines did not develop any symptom, 24 lines had a mean disease incidence of 8%, 28 lines had a disease incidence of 26.6% and developed intermediate mosaic symptoms, and 20 lines were more susceptible (>50% disease incidence and severe yellowing) than either of the parents, which had 25% to 38% disease incidence and moderate symptoms. Heritability for disease incidence was 0.54±0.01, for foliar yellowing 0.36±0.13, for pods plant^-1 0.69±0.01, for seeds plant^-1 0.54±0.09, and for yield plant^-1 0.49±0.01. Gains from selection (at 20% selection pressure) for these traits were 49.5%, 31.6%, 24%, 0%, and 20%, respectively, over the mean value of all RILs. Correlation coefficients between disease incidence and foliar yellowing and among yield and its components were positive. Disease incidence and foliar yellowing showed negative associations with yield and its components.     

Comparison of recurrent and congruity backcrossing for interracial hybridization in common bean

Summary Two common bean (Phaseolus vulgaris L.) cultivars were used for recurrent backcrossing (i.e., repeated backcrossing to one of the parents) to both parents independently and for congruity backcrossing (i.e., backcrossing alternately to both parents). One cultivar, ICA Pijao of race Mesoamerica, was late maturing, with erect type II growth habit and small seeds. The other was Pinto UI 114 of race Durango, an early maturing cultivar with prostrate type III growth habit and medium seeds. One to three recurrent backcrosses (RBC) to both parents, and two rounds of congruity backcrosses (CBC), were made. Thirty-two random lines from each method along with two parents were compared in a reps-in-set design at two locations (Popayán and Quilichao) in Colombia in 1992–1993.Differences between lines derived through different methods were found for seed yield, 100-seed weight, days to maturity, growth habit, and seed color pattern. The RBC to ICA Pijao produced lines with relatively higher seed yield, smaller seed size, and delayed maturity. Similarly, the RBC to Pinto UI 114 produced lines with reduced yield, medium seed size, and earlier maturity. All lines from one, two, and three RBC to Pinto UI 114 had type III growth habit. While most lines from the RBC to ICA Pijao had erect type II Growth habit, a few type III lines were also found in all the RBC. The lines derived from the CBC mostly possessed yield, maturity, and seed characteristics between those of the two parents and lines derived from RBC to both parents independently. They also had more variation for growth habit. To maximize recombination between and retention of desirable traits from distantly related parents used in interracial crosses, use of the CBC is suggested.     

Effects of divergent selection for seed protein content in high‐protein vs. food‐grade populations of early maturity soybean

Due to the growing need for vegetable protein in Central European agriculture, there is interest in producing food‐grade soybeans, which are higher in seed protein and sucrose content and have a larger seed size than conventional soybeans. As protein content of conventional soybean is often below 400 g/kg, either high‐protein or food‐grade donors were crossed with adapted genotypes in order to increase their protein level. After divergent selection for protein content, lines were evaluated for seed quality characters across three environments in Austria. The objectives of this research were to determine the roles of genetic background and the selection for protein content on food‐grade soybean traits. While seed protein content of adapted parents was between 395 and 420 g/kg, its range was from 410 to 490 g/kg for the high‐protein and from 390 to 450 g/kg for the food‐grade lines, respectively. However, food‐grade populations were superior in seed size and sucrose content and revealed different correlation patterns between quality traits as compared to high‐protein populations, which demonstrates their usefulness for developing soybeans with improved quality.     

Genetic diversity in pod and seed quality traits of common bean populations from northwestern Spain

Common bean (Phaseolus vulgaris L.) is an important food in the northwest of Spain where it is consumed as either green pods or dry seeds after cooking. Quality properties play a major role in cultivar acceptance by processors and consumers. To determine if sufficient variation in important culinary and nutritional traits exists within common bean, fifty-nine populations (plus five commercial cultivars) were grown in the northwest of the Iberian Peninsula in three different environments and evaluated for sixteen fresh pod and dry seed quality traits. Populations showed significant differences for pod curvature, length/width and width/thickness ratios of pod and seed, pod and seed texture, volume, hardness, seed coat percentage and water absorption of seed, crude protein, crude fat, crude fiber, toal sugars and starch content. Genotype × environment interaction was significant for fresh pod traits such as curvature, length/width and width/thickness ratios, and texture, and for dry seed traits such as length/width and width/thickness ratios, volume, hardness and water absorption. Estimates of heritabilities and constancies (genotypic/environmental variance) were higher than 0.5 and 1.0 respectively for pod curvature, length/width and width/thickness ratios of pod and seed, seed volume and seed water absorption. There were high correlations of pod texture with seed length/width and width-thickness ratios, seed coat percentage, seed water absorption, crude fat, total sugars, starch content and crude fiber. Pod texture could be used as an important parameter for evaluating both seed culinary and nutritional quality. In addition, 17 populations showed promise as parental material in a breeding program for pod and seed culinary quality and protein content. The culinary and nutritional quality potential of the accessions such as PHA-0171, PHA-0253 and PHA-0257 which are known as Alubias de riñón could be the base material in a breeding program to obtain accessions with a good seed quality.     

Combining ability of seed vigor and seed yield in soybean

Studies have shown no consensus in relationships between seed yield and vigor in soybean [Glycine max (L.) Merrill]. The lack of information regarding the inheritance of seed vigor prompted this study to determine the types of gene action and combining ability estimates for seed vigor and its related traits. Five high and six low seed vigor soybean genotypes were crossed in a diallel, and selfed to produce 55 F₂ progenies, which were examined, along with the parents, for seed vigor, yield, and seed weight. Significant genotype and environment effects were found for seed vigor and yield. General combining ability (GCA) effects for seed vigor and seed yield were significant (p≤ 0.01) and larger than specific combining ability (SCA) effects. Significant GCA and SCA effects were found for seed weight, indicating that both additive and non additive genetic effects were involved in conditioning seed weight. The ratios of mean square, 2GCA / (2GCA+SCA), were 0.96 for seed vigor and 0.93 for seed yield. These ratios indicated that additive gene effects were more important than non additive gene effects for seed vigor and seed yield in these crosses. Mean seed vigor(83.8%), as determined by accelerated aging germination, and mean seed yield (2,155 kg ha^-1)in high vigor × high vigor crosses were higher than the high vigor × low vigor and low vigor × low vigor crosses. Mean percent accelerated aging germination rates in F₂ populations from diallel crosses were significantly related to mid-parent seed vigor(r² = 0.52^**) and midparent seed size (r² = 0.31^**). These results indicated that levels of seed vigor can be improved through breeding, while maintaining high yields because of the predominance of GCA effects in both seed vigor and seed yield. This revised version was published online in July 2006 with corrections to the Cover Date.     

Selection for Seed Yield in Lolium perenne L.*

Components of seed yield were estimated for each set of 100 plants derived from six varieties of Lolium perenne. Significant differences between the varieties were found for all components of seed yield, but the range was broader within each variety. An indirect selection of seed yield using the character seeds per spike produced a selection response similar to that obtained by direct selection on high seed yield per plant. A direct and indirect selection of characters estimated in small, drilled plots of topcross off-springs (F₁) was less successful than the selection based on the single plants. Spearman rank correlation coefficients between the single plants and their offsprings did not show significant agreement for seed yield. But altogether the results indicated that the increase of seed yield/area was about 6 % when 10 % of the best plants were selected.     

A new gene conferring resistance to anthracnose in Andean common bean (Phaseolus vulgaris L.) cultivar ‘Jalo Vermelho’

‘Jalo Vermelho’ is a large seeded Andean landrace of common bean (Phaseolus vulgaris L.) that constitutes an important source of anthracnose resistance, disease caused by Colletotrichum lindemuthianum. This landrace has different resistance spectrum, when compared with cultivars of Andean origin, indicating the presence of an anthracnose‐resistant gene different from Co‐1 locus. This anthracnose resistance was characterized by inheritance and allelism tests were carried out on the following genes: Co‐1, Co‐1², Co‐1³, Co‐1⁵, Co‐2, Co‐3, Co‐4, Co‐5, Co‐6, Co‐7, Co‐9, Co‐10, Co‐11 and Co‐13. Resistance to races 23, 55, 89 and 453 in ‘Jalo Vermelho’ was conditioned by a single dominant gene. Allelism tests in F₂ populations demonstrated that ‘Jalo Vermelho’ carries a dominant gene located at a distinct locus, differing from previously characterized genes. Based on its independence from previously described loci, the authors propose that the ‘Jalo Vermelho’s gene should be named Co‐12. This new gene is a valuable source of resistance to anthracnose which can be transferred to commercial cultivars to enhance the effectiveness of resistance gene pyramiding in bean breeding programmes.     

Molecular markers for yield components in Brassica juncea – do these assist in breeding for high seed yield?

A population of 112 F₁-derived doubled haploid lines was produced from a reciprocal cross of Brassica juncea. The parents differed for seed quality, seed color and many agronomic traits. A detailed RFLP linkage map of this population, comprising 316 loci, had been constructed, and was used to map quantitative trait loci (QTL) for seed yield and yield components, viz. siliqua length, number of seeds per siliqua, number of siliques per main raceme and 1000-seed weight. Stable and significant QTLs were identified for all these yield components except seed yield. For yield components, a selection index based on combined phenotypic and molecular data (QTL effects) could double up the efficiency of selection compared to the expected genetic advance by phenotypic selection. Selection indices for high seed yield, based on the phenotypic data of yield and yield components, could only improve the efficiency of selection by 4% of the genetic advance that can be expected from direct phenotypic selection for yield alone. Inclusion of molecular data together with the phenotypic data of yield components in the selection indices did not improve the efficiency of selection for higher seed yield. This is probably due to often negative relationships among the yield components. Most of the QTLs for yield components were compensating each other, probably due to linkage, pleiotropy or developmentally induced relationships among them. The breeding strategy for B. juncea and challenges to marker assisted selection are discussed.